Wall clock time and date at job start Sun Mar 7 2021 07:06:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45202 * 109.47277 * 2 1 4 4 C 1.34234 * 116.99554 * 180.02562 * 3 2 1 5 5 O 1.20817 * 120.00297 * 359.97438 * 4 3 2 6 6 C 1.50702 * 119.99402 * 180.02562 * 4 3 2 7 7 H 1.09002 * 112.91299 * 48.74444 * 6 4 3 8 8 C 1.53784 * 113.61202 * 180.02562 * 6 4 3 9 9 C 1.53784 * 87.08256 * 139.97936 * 8 6 4 10 10 O 1.42894 * 113.61645 * 89.19689 * 9 8 6 11 11 C 1.52999 * 113.61032 * 220.01882 * 9 8 6 12 12 N 1.46506 * 109.46684 * 178.47166 * 11 9 8 13 13 C 1.34777 * 119.99873 * 180.02562 * 12 11 9 14 14 O 1.21284 * 119.99754 * 359.97438 * 13 12 11 15 15 C 1.50696 * 120.00137 * 179.97438 * 13 12 11 16 16 O 1.42896 * 109.47216 * 179.97438 * 15 13 12 17 17 C 1.35904 * 117.00080 * 179.97438 * 16 15 13 18 18 C 1.38747 * 120.02759 * 180.02562 * 17 16 15 19 19 C 1.50697 * 119.97459 * 0.02562 * 18 17 16 20 20 O 1.42900 * 109.46954 * 284.99995 * 19 18 17 21 21 Si 1.86298 * 109.47238 * 164.99876 * 19 18 17 22 22 C 1.38197 * 120.05300 * 179.97438 * 18 17 16 23 23 C 1.38151 * 120.11004 * 359.97438 * 22 18 17 24 24 C 1.38792 * 120.05597 * 0.02562 * 23 22 18 25 25 O 1.35899 * 120.02866 * 180.02562 * 24 23 22 26 26 C 1.42894 * 117.00154 * 0.02562 * 25 24 23 27 27 C 1.38615 * 119.94465 * 359.75525 * 24 23 22 28 28 C 1.53785 * 87.17066 * 334.60550 * 9 8 6 29 29 H 1.09000 * 109.47414 * 59.99280 * 1 2 3 30 30 H 1.08994 * 109.47516 * 179.97438 * 1 2 3 31 31 H 1.09003 * 109.46783 * 300.00221 * 1 2 3 32 32 H 1.09004 * 109.46691 * 240.00325 * 2 1 3 33 33 H 1.08991 * 109.47512 * 120.00524 * 2 1 3 34 34 H 1.08995 * 113.61451 * 25.42606 * 8 6 4 35 35 H 1.08999 * 113.61135 * 254.52925 * 8 6 4 36 36 H 0.96700 * 114.00572 * 181.52993 * 10 9 8 37 37 H 1.09000 * 109.47486 * 58.47100 * 11 9 8 38 38 H 1.09001 * 109.47362 * 298.46378 * 11 9 8 39 39 H 0.96995 * 120.00050 * 359.72237 * 12 11 9 40 40 H 1.09004 * 109.47043 * 299.99732 * 15 13 12 41 41 H 1.09000 * 109.46978 * 59.99653 * 15 13 12 42 42 H 1.09002 * 109.47411 * 44.99384 * 19 18 17 43 43 H 0.96703 * 113.99577 * 299.99716 * 20 19 18 44 44 H 1.48498 * 109.99993 * 179.97438 * 21 19 18 45 45 H 1.48498 * 110.00119 * 301.31397 * 21 19 18 46 46 H 1.08002 * 119.94317 * 180.02562 * 22 18 17 47 47 H 1.08006 * 119.97478 * 180.02562 * 23 22 18 48 48 H 1.09001 * 109.47412 * 300.00018 * 26 25 24 49 49 H 1.09010 * 109.47138 * 59.99553 * 26 25 24 50 50 H 1.09003 * 109.47686 * 179.97438 * 26 25 24 51 51 H 1.08000 * 120.05630 * 180.25336 * 27 24 23 52 52 H 1.09001 * 113.60665 * 139.93872 * 28 9 8 53 53 H 1.08999 * 113.61625 * 270.83961 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3448 1.5447 -0.0005 5 8 4.0807 0.5865 -0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.4716 3.5821 0.7554 8 6 5.4584 2.9679 -0.0013 9 6 5.3558 4.1430 -0.9880 10 8 5.2834 5.4203 -0.3514 11 6 6.3970 4.0954 -2.1080 12 7 6.1948 5.2311 -3.0113 13 6 7.0009 5.3948 -4.0789 14 8 7.8940 4.6022 -4.2916 15 6 6.7925 6.5625 -5.0084 16 8 7.7650 6.5182 -6.0544 17 6 7.7156 7.5073 -6.9851 18 6 8.6299 7.5250 -8.0287 19 6 9.6776 6.4466 -8.1301 20 8 10.6932 6.6755 -7.1513 21 14 10.4366 6.4762 -9.8312 22 6 8.5798 8.5302 -8.9757 23 6 7.6195 9.5194 -8.8863 24 6 6.7028 9.5061 -7.8443 25 8 5.7581 10.4791 -7.7572 26 6 5.7665 11.4843 -8.7728 27 6 6.7480 8.4964 -6.8957 28 6 3.9845 3.5802 -1.3975 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3633 0.5139 0.8900 32 1 1.8932 -0.5138 -0.8901 33 1 1.8933 -0.5139 0.8898 34 1 5.9125 2.0752 -0.4312 35 1 5.8904 3.2422 0.9610 36 1 5.1953 6.1617 -0.9660 37 1 6.2895 3.1646 -2.6649 38 1 7.3969 4.1477 -1.6771 39 1 5.4780 5.8626 -2.8434 40 1 5.7925 6.5102 -5.4391 41 1 6.9002 7.4935 -4.4519 42 1 9.2166 5.4745 -7.9548 43 1 11.1470 7.5241 -7.2465 44 1 11.4720 5.4177 -9.9439 45 1 9.3857 6.2709 -10.8600 46 1 9.2921 8.5421 -9.7874 47 1 7.5821 10.3038 -9.6278 48 1 6.7244 12.0043 -8.7614 49 1 5.6178 11.0180 -9.7468 50 1 4.9635 12.1972 -8.5852 51 1 6.0330 8.4820 -6.0865 52 1 3.2284 4.3483 -1.5605 53 1 4.0349 2.8552 -2.2098 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_4974312.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:06:38 Heat of formation + Delta-G solvation = -214.374562 kcal Electronic energy + Delta-G solvation = -36905.007752 eV Core-core repulsion = 31710.807004 eV Total energy + Delta-G solvation = -5194.200748 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.180 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.19297 -41.81997 -41.07209 -40.32558 -39.71261 -38.29888 -37.79856 -36.91984 -36.06027 -35.45495 -32.71425 -32.29020 -31.63603 -30.53179 -28.71831 -28.30177 -27.02695 -26.15873 -26.10281 -23.93333 -23.51976 -22.49105 -21.98025 -21.85866 -20.81186 -19.94312 -19.29785 -18.72393 -18.20043 -17.90857 -17.78476 -17.61570 -17.57078 -17.40631 -17.05883 -16.77180 -16.66923 -16.49175 -16.24716 -16.01380 -15.81354 -15.44919 -15.20340 -15.11915 -14.89155 -14.65217 -14.47147 -14.43819 -14.22392 -13.87678 -13.83041 -13.55008 -13.49258 -13.32971 -13.28402 -13.15239 -13.00942 -12.80611 -12.59815 -12.47082 -12.31913 -12.27298 -12.01471 -11.86903 -11.78327 -11.61980 -11.60973 -11.51198 -11.12644 -10.95087 -10.38466 -10.35787 -9.69134 -9.09502 -5.04161 0.21603 0.30868 1.01034 1.31232 1.33268 1.34575 1.59825 1.64037 1.98277 2.24755 2.50078 2.58511 2.81570 3.06892 3.29601 3.38041 3.42041 3.54027 3.60784 3.74303 3.83744 3.87147 3.92721 3.93031 4.00317 4.00754 4.09098 4.17360 4.17795 4.27478 4.27940 4.35263 4.40036 4.44978 4.47727 4.54749 4.59751 4.61828 4.64555 4.77085 4.81408 4.82843 4.85566 4.87024 5.02586 5.07030 5.09833 5.11124 5.24406 5.28801 5.38479 5.48262 6.09085 6.28132 6.39273 6.60165 6.61502 6.86221 7.00363 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.101 4.101 7 H 0.147 0.853 8 C -0.109 4.109 9 C 0.117 3.883 10 O -0.537 6.537 11 C 0.108 3.892 12 N -0.707 5.707 13 C 0.516 3.484 14 O -0.568 6.568 15 C 0.035 3.965 16 O -0.306 6.306 17 C 0.173 3.827 18 C -0.204 4.204 19 C -0.068 4.068 20 O -0.558 6.558 21 Si 0.793 3.207 22 C -0.032 4.032 23 C -0.238 4.238 24 C 0.164 3.836 25 O -0.330 6.330 26 C 0.016 3.984 27 C -0.252 4.252 28 C -0.135 4.135 29 H 0.070 0.930 30 H 0.095 0.905 31 H 0.069 0.931 32 H 0.067 0.933 33 H 0.066 0.934 34 H 0.102 0.898 35 H 0.093 0.907 36 H 0.395 0.605 37 H 0.074 0.926 38 H 0.068 0.932 39 H 0.420 0.580 40 H 0.125 0.875 41 H 0.126 0.874 42 H 0.080 0.920 43 H 0.391 0.609 44 H -0.305 1.305 45 H -0.280 1.280 46 H 0.166 0.834 47 H 0.161 0.839 48 H 0.071 0.929 49 H 0.067 0.933 50 H 0.116 0.884 51 H 0.155 0.845 52 H 0.116 0.884 53 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.684 10.201 -2.506 12.450 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.430 6.430 6 C -0.119 4.119 7 H 0.164 0.836 8 C -0.147 4.147 9 C 0.075 3.925 10 O -0.345 6.345 11 C -0.016 4.016 12 N -0.363 5.363 13 C 0.302 3.698 14 O -0.445 6.445 15 C -0.043 4.043 16 O -0.219 6.219 17 C 0.127 3.873 18 C -0.205 4.205 19 C -0.176 4.176 20 O -0.365 6.365 21 Si 0.698 3.302 22 C -0.049 4.049 23 C -0.256 4.256 24 C 0.117 3.883 25 O -0.243 6.243 26 C -0.078 4.078 27 C -0.271 4.271 28 C -0.173 4.173 29 H 0.089 0.911 30 H 0.114 0.886 31 H 0.088 0.912 32 H 0.085 0.915 33 H 0.085 0.915 34 H 0.120 0.880 35 H 0.112 0.888 36 H 0.246 0.754 37 H 0.093 0.907 38 H 0.087 0.913 39 H 0.258 0.742 40 H 0.143 0.857 41 H 0.144 0.856 42 H 0.098 0.902 43 H 0.240 0.760 44 H -0.233 1.233 45 H -0.207 1.207 46 H 0.182 0.818 47 H 0.178 0.822 48 H 0.089 0.911 49 H 0.086 0.914 50 H 0.134 0.866 51 H 0.173 0.827 52 H 0.134 0.866 53 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -5.909 7.819 -2.475 10.108 hybrid contribution -0.739 -0.326 0.196 0.831 sum -6.648 7.493 -2.280 10.273 Atomic orbital electron populations 1.21823 0.90570 1.04278 1.03808 1.23261 0.97028 0.79398 1.02419 1.86528 1.24234 1.33428 1.83383 1.24095 0.80553 0.93005 0.70974 1.90673 1.61195 1.44275 1.46815 1.22567 0.96794 0.89642 1.02947 0.83580 1.23070 0.93493 0.96941 1.01218 1.22053 0.93317 0.85487 0.91622 1.86594 1.95978 1.14747 1.37209 1.21871 0.99769 0.89829 0.90140 1.45456 1.34932 1.29865 1.26074 1.20498 0.81332 0.86242 0.81741 1.90804 1.33721 1.46381 1.73613 1.22751 0.94251 0.98491 0.88811 1.86222 1.53486 1.46265 1.35906 1.18606 0.93365 0.86805 0.88491 1.19738 1.01217 1.01728 0.97808 1.25116 0.89785 0.97484 1.05240 1.86544 1.51253 1.43486 1.55245 0.94135 0.78191 0.86607 0.71274 1.20854 0.96915 0.90994 0.96152 1.21450 0.98945 1.03796 1.01454 1.18881 0.88051 0.87975 0.93366 1.86052 1.50400 1.36281 1.51578 1.23410 1.04664 0.89440 0.90330 1.20552 1.04415 0.97360 1.04798 1.23700 0.98335 1.01158 0.94110 0.91140 0.88597 0.91185 0.91478 0.91511 0.87981 0.88797 0.75410 0.90742 0.91345 0.74161 0.85738 0.85596 0.90204 0.76003 1.23345 1.20658 0.81754 0.82189 0.91060 0.91389 0.86608 0.82743 0.86600 0.88781 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.50 10.29 71.98 0.74 1.24 16 2 C 0.05 0.08 6.19 71.98 0.45 0.53 16 3 O -0.36 -1.37 10.22 -51.45 -0.53 -1.89 16 4 C 0.47 2.24 7.49 71.24 0.53 2.78 16 5 O -0.54 -6.16 15.65 21.99 0.34 -5.81 16 6 C -0.10 0.18 4.20 -10.95 -0.05 0.14 16 7 H 0.15 -0.65 8.14 -2.39 -0.02 -0.67 16 8 C -0.11 0.09 6.80 31.12 0.21 0.30 16 9 C 0.12 -0.57 1.46 -10.27 -0.01 -0.58 16 10 O -0.54 3.31 13.40 -148.98 -2.00 1.31 16 11 C 0.11 -0.16 5.30 86.38 0.46 0.30 16 12 N -0.71 3.58 5.34 -463.05 -2.47 1.10 16 13 C 0.52 1.79 7.91 87.66 0.69 2.48 16 14 O -0.57 -9.25 16.50 16.00 0.26 -8.99 16 15 C 0.03 -0.06 5.22 71.23 0.37 0.31 16 16 O -0.31 -2.45 8.99 -73.43 -0.66 -3.11 16 17 C 0.17 0.87 6.66 22.49 0.15 1.02 16 18 C -0.20 -0.77 5.27 -19.75 -0.10 -0.88 16 19 C -0.07 -0.41 2.37 71.24 0.17 -0.24 16 20 O -0.56 -4.29 12.88 -148.98 -1.92 -6.21 16 21 Si 0.79 0.54 29.91 68.60 2.05 2.59 16 22 C -0.03 0.06 8.65 22.24 0.19 0.25 16 23 C -0.24 0.60 9.04 22.38 0.20 0.80 16 24 C 0.16 0.07 6.68 22.49 0.15 0.22 16 25 O -0.33 0.19 10.49 -92.41 -0.97 -0.78 16 26 C 0.02 -0.12 9.81 113.37 1.11 0.99 16 27 C -0.25 -0.26 8.97 22.46 0.20 -0.05 16 28 C -0.14 0.82 7.03 31.18 0.22 1.04 16 29 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 30 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 31 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 32 H 0.07 0.14 8.13 -2.39 -0.02 0.12 16 33 H 0.07 0.15 8.13 -2.39 -0.02 0.13 16 34 H 0.10 0.20 7.39 -2.39 -0.02 0.18 16 35 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 36 H 0.39 -5.60 7.42 -74.06 -0.55 -6.15 16 37 H 0.07 0.10 7.98 -2.39 -0.02 0.08 16 38 H 0.07 0.17 8.14 -2.39 -0.02 0.15 16 39 H 0.42 -5.89 7.13 -92.71 -0.66 -6.56 16 40 H 0.13 -0.99 7.65 -2.38 -0.02 -1.01 16 41 H 0.13 -0.99 7.67 -2.39 -0.02 -1.01 16 42 H 0.08 0.95 7.82 -2.39 -0.02 0.93 16 43 H 0.39 -0.91 8.70 -74.06 -0.64 -1.56 16 44 H -0.30 -2.74 7.11 99.48 0.71 -2.04 16 45 H -0.28 -1.21 7.11 99.48 0.71 -0.50 16 46 H 0.17 -1.35 5.12 -2.91 -0.01 -1.36 16 47 H 0.16 -1.29 6.29 -2.91 -0.02 -1.31 16 48 H 0.07 -0.70 7.66 -2.39 -0.02 -0.71 16 49 H 0.07 -0.63 7.66 -2.38 -0.02 -0.65 16 50 H 0.12 -1.21 8.14 -2.39 -0.02 -1.23 16 51 H 0.16 -0.60 6.30 -2.91 -0.02 -0.62 16 52 H 0.12 -1.21 8.14 -2.39 -0.02 -1.23 16 53 H 0.09 -0.42 7.94 -2.39 -0.02 -0.44 16 Total: 0.00 -36.82 441.08 -1.03 -37.86 By element: Atomic # 1 Polarization: -25.85 SS G_CDS: -0.83 Total: -26.68 kcal Atomic # 6 Polarization: 4.94 SS G_CDS: 5.69 Total: 10.63 kcal Atomic # 7 Polarization: 3.58 SS G_CDS: -2.47 Total: 1.10 kcal Atomic # 8 Polarization: -20.03 SS G_CDS: -5.46 Total: -25.50 kcal Atomic # 14 Polarization: 0.54 SS G_CDS: 2.05 Total: 2.59 kcal Total: -36.82 -1.03 -37.86 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_4974312.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -176.519 kcal (2) G-P(sol) polarization free energy of solvation -36.823 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -213.341 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.033 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.856 kcal (6) G-S(sol) free energy of system = (1) + (5) -214.375 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds