Wall clock time and date at job start Sun Mar 7 2021 07:06:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 O 1.45196 * 109.47181 * 2 1 4 4 C 1.34224 * 116.99820 * 180.02562 * 3 2 1 5 5 O 1.20826 * 120.00384 * 0.02562 * 4 3 2 6 6 C 1.50697 * 120.00055 * 180.02562 * 4 3 2 7 7 H 1.09004 * 112.85509 * 311.19921 * 6 4 3 8 8 C 1.53954 * 113.66696 * 82.44133 * 6 4 3 9 9 C 1.53785 * 87.02293 * 139.93467 * 8 6 4 10 10 O 1.42895 * 113.61409 * 89.22639 * 9 8 6 11 11 C 1.53001 * 113.61489 * 220.05173 * 9 8 6 12 12 N 1.46501 * 109.46913 * 284.13308 * 11 9 8 13 13 C 1.34769 * 120.00007 * 180.02562 * 12 11 9 14 14 O 1.21693 * 120.00349 * 5.09900 * 13 12 11 15 15 C 1.46671 * 120.00006 * 185.10744 * 13 12 11 16 16 C 1.37884 * 126.22671 * 5.50178 * 15 13 12 17 17 C 1.39878 * 107.09346 * 180.02562 * 16 15 13 18 18 Br 1.89099 * 126.07432 * 179.97438 * 17 16 15 19 19 C 1.35501 * 107.85263 * 0.02562 * 17 16 15 20 20 C 1.50701 * 125.57121 * 180.02562 * 19 17 16 21 21 O 1.42896 * 109.47459 * 149.95750 * 20 19 17 22 22 Si 1.86298 * 109.47405 * 29.95577 * 20 19 17 23 23 N 1.35595 * 108.85899 * 359.97438 * 19 17 16 24 24 C 1.46505 * 125.67669 * 179.73368 * 23 19 17 25 25 C 1.53782 * 87.16856 * 334.63831 * 9 8 6 26 26 H 1.08997 * 109.47314 * 180.02562 * 1 2 3 27 27 H 1.09000 * 109.46629 * 299.99557 * 1 2 3 28 28 H 1.08991 * 109.47140 * 59.99627 * 1 2 3 29 29 H 1.08997 * 109.46417 * 239.99954 * 2 1 3 30 30 H 1.08997 * 109.46766 * 120.00564 * 2 1 3 31 31 H 1.08999 * 113.61668 * 25.41524 * 8 6 4 32 32 H 1.09005 * 113.66983 * 254.46179 * 8 6 4 33 33 H 0.96702 * 114.00180 * 80.86889 * 10 9 8 34 34 H 1.08998 * 109.47278 * 164.13543 * 11 9 8 35 35 H 1.08991 * 109.46993 * 44.13453 * 11 9 8 36 36 H 0.97001 * 120.00316 * 359.97438 * 12 11 9 37 37 H 1.07998 * 126.45275 * 0.03698 * 16 15 13 38 38 H 1.09004 * 109.47115 * 269.95434 * 20 19 17 39 39 H 0.96699 * 114.00309 * 299.99864 * 21 20 19 40 40 H 1.48498 * 109.99799 * 58.68090 * 22 20 19 41 41 H 1.48492 * 110.00356 * 180.02562 * 22 20 19 42 42 H 1.08996 * 109.46729 * 85.43184 * 24 23 19 43 43 H 1.09000 * 109.47177 * 205.43198 * 24 23 19 44 44 H 1.08997 * 109.47251 * 325.42954 * 24 23 19 45 45 H 1.09007 * 113.61289 * 139.93994 * 25 9 8 46 46 H 1.08995 * 113.61673 * 270.75575 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3447 1.5447 -0.0005 5 8 4.0808 0.5865 -0.0015 6 6 3.9208 2.9372 0.0000 7 1 3.4709 3.5818 -0.7552 8 6 3.9863 3.5784 1.3982 9 6 5.3571 4.1417 0.9876 10 8 5.2839 5.4198 0.3528 11 6 6.3999 4.0927 2.1062 12 7 6.1260 5.1561 3.0760 13 6 6.9212 5.3064 4.1537 14 8 7.9191 4.6204 4.2740 15 6 6.5837 6.2966 5.1817 16 6 5.4379 7.0621 5.2308 17 6 5.5291 7.8660 6.3719 18 35 4.2426 9.1240 6.9533 19 6 6.7035 7.5838 6.9860 20 6 7.2048 8.2231 8.2553 21 8 8.0237 7.2926 8.9662 22 14 5.7554 8.7133 9.3182 23 7 7.3535 6.6314 6.2725 24 6 8.6607 6.0589 6.6039 25 6 5.4583 2.9679 -0.0007 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3632 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 1.8933 -0.5138 -0.8900 30 1 1.8933 -0.5139 0.8899 31 1 4.0379 2.8523 2.2095 32 1 3.2304 4.3462 1.5634 33 1 5.1966 6.1604 0.9685 34 1 7.3941 4.2345 1.6826 35 1 6.3522 3.1249 2.6051 36 1 5.3728 5.7525 2.9421 37 1 4.6234 7.0443 4.5218 38 1 7.7908 9.1087 8.0092 39 1 7.5664 6.4786 9.2181 40 1 4.9307 7.5196 9.6343 41 1 6.2364 9.3456 10.5728 42 1 8.5293 5.2360 7.3064 43 1 9.1360 5.6888 5.6955 44 1 9.2892 6.8259 7.0561 45 1 5.8891 3.2436 -0.9633 46 1 5.9144 2.0751 0.4270 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_5000100.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:06:43 Heat of formation + Delta-G solvation = -125.643695 kcal Electronic energy + Delta-G solvation = -31753.938737 eV Core-core repulsion = 27079.469878 eV Total energy + Delta-G solvation = -4674.468859 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.071 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.93184 -42.10353 -40.84934 -39.90251 -37.99198 -37.76157 -36.04917 -35.55360 -34.54272 -32.71261 -32.53277 -31.30847 -29.72717 -27.42820 -27.25995 -26.90877 -25.81703 -23.83276 -23.22726 -21.96924 -21.58344 -20.81295 -20.74032 -19.35339 -18.83067 -18.51426 -17.78468 -17.51380 -17.37111 -17.32460 -17.14076 -16.59715 -16.13213 -16.10720 -15.72075 -15.53473 -15.19116 -15.16359 -14.84067 -14.61793 -14.54516 -14.40175 -14.17513 -14.10919 -13.79203 -13.72237 -13.50237 -13.26154 -13.17908 -12.97500 -12.80874 -12.75077 -12.56623 -12.53668 -12.26903 -12.10540 -11.74180 -11.64332 -11.57840 -11.47714 -11.23153 -10.91372 -10.88568 -10.37699 -9.88445 -9.35630 -4.69423 0.12881 0.35965 0.89900 1.05050 1.18987 1.42124 1.53824 1.63475 1.92142 2.09545 2.19249 2.87806 3.07181 3.12232 3.28395 3.34989 3.43470 3.46853 3.58620 3.76630 3.90885 3.95492 4.02945 4.08037 4.21634 4.22485 4.30521 4.32347 4.34653 4.39287 4.59124 4.60185 4.63077 4.68033 4.70801 4.80617 4.88201 4.88512 4.92234 5.11112 5.13008 5.14865 5.25041 5.41999 5.56751 5.75433 6.22047 6.28040 6.64028 6.66543 6.97123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.102 4.102 7 H 0.145 0.855 8 C -0.136 4.136 9 C 0.116 3.884 10 O -0.538 6.538 11 C 0.111 3.889 12 N -0.699 5.699 13 C 0.593 3.407 14 O -0.576 6.576 15 C -0.058 4.058 16 C -0.087 4.087 17 C -0.190 4.190 18 Br 0.091 6.909 19 C 0.058 3.942 20 C -0.041 4.041 21 O -0.543 6.543 22 Si 0.629 3.371 23 N -0.391 5.391 24 C 0.069 3.931 25 C -0.108 4.108 26 H 0.095 0.905 27 H 0.070 0.930 28 H 0.069 0.931 29 H 0.066 0.934 30 H 0.067 0.933 31 H 0.095 0.905 32 H 0.116 0.884 33 H 0.395 0.605 34 H 0.073 0.927 35 H 0.079 0.921 36 H 0.418 0.582 37 H 0.193 0.807 38 H 0.141 0.859 39 H 0.385 0.615 40 H -0.280 1.280 41 H -0.271 1.271 42 H 0.085 0.915 43 H 0.092 0.908 44 H 0.101 0.899 45 H 0.092 0.908 46 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.998 3.706 -2.076 7.350 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.430 6.430 6 C -0.120 4.120 7 H 0.163 0.837 8 C -0.173 4.173 9 C 0.074 3.926 10 O -0.347 6.347 11 C -0.013 4.013 12 N -0.353 5.353 13 C 0.381 3.619 14 O -0.457 6.457 15 C -0.172 4.172 16 C -0.113 4.113 17 C -0.276 4.276 18 Br 0.175 6.825 19 C -0.065 4.065 20 C -0.152 4.152 21 O -0.349 6.349 22 Si 0.531 3.469 23 N -0.063 5.063 24 C -0.071 4.071 25 C -0.146 4.146 26 H 0.113 0.887 27 H 0.089 0.911 28 H 0.088 0.912 29 H 0.084 0.916 30 H 0.086 0.914 31 H 0.114 0.886 32 H 0.134 0.866 33 H 0.246 0.754 34 H 0.091 0.909 35 H 0.097 0.903 36 H 0.256 0.744 37 H 0.210 0.790 38 H 0.159 0.841 39 H 0.234 0.766 40 H -0.206 1.206 41 H -0.197 1.197 42 H 0.103 0.897 43 H 0.111 0.889 44 H 0.119 0.881 45 H 0.111 0.889 46 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -5.143 3.145 -1.597 6.236 hybrid contribution 0.699 -1.406 0.678 1.710 sum -4.445 1.739 -0.919 4.860 Atomic orbital electron populations 1.21823 0.90655 1.04231 1.03808 1.23250 0.96970 0.79443 1.02402 1.86527 1.24302 1.33364 1.83375 1.24116 0.80521 0.93042 0.70944 1.90672 1.61177 1.44291 1.46860 1.22573 0.96869 0.89579 1.03015 0.83724 1.23697 0.98390 1.01213 0.94043 1.22059 0.93387 0.85436 0.91697 1.86587 1.95978 1.14791 1.37299 1.21902 0.99552 0.91195 0.88663 1.45282 1.32141 1.35049 1.22815 1.16944 0.82429 0.81342 0.81175 1.90833 1.27803 1.48378 1.78659 1.20106 0.96006 1.06593 0.94502 1.21548 0.97443 0.94496 0.97820 1.20699 0.96950 1.06436 1.03491 1.96328 1.51168 1.55057 1.79961 1.21024 0.93347 0.95018 0.97128 1.24710 1.05242 0.94938 0.90270 1.86557 1.40110 1.32469 1.75812 0.92765 0.80700 0.90005 0.83408 1.43918 1.16282 1.28495 1.17606 1.22421 0.80785 1.00305 1.03626 1.23060 0.93396 0.96966 1.01183 0.88673 0.91112 0.91227 0.91566 0.91433 0.88637 0.86575 0.75390 0.90879 0.90305 0.74380 0.78960 0.84138 0.76558 1.20580 1.19741 0.89698 0.88924 0.88073 0.88910 0.87822 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.61 10.29 71.98 0.74 1.35 16 2 C 0.05 0.03 6.19 71.98 0.45 0.48 16 3 O -0.36 -0.97 10.22 -51.36 -0.52 -1.49 16 4 C 0.47 1.60 7.49 71.23 0.53 2.14 16 5 O -0.54 -5.36 15.65 21.96 0.34 -5.02 16 6 C -0.10 0.33 4.20 -10.95 -0.05 0.29 16 7 H 0.15 -0.81 8.14 -2.38 -0.02 -0.83 16 8 C -0.14 1.06 7.03 31.18 0.22 1.28 16 9 C 0.12 -0.79 1.38 -10.27 -0.01 -0.80 16 10 O -0.54 3.95 13.41 -148.98 -2.00 1.96 16 11 C 0.11 -0.48 5.24 86.38 0.45 -0.03 16 12 N -0.70 4.49 5.30 -467.11 -2.48 2.02 16 13 C 0.59 0.69 7.77 86.45 0.67 1.36 16 14 O -0.58 -5.25 14.65 -4.33 -0.06 -5.31 16 15 C -0.06 0.02 6.88 40.35 0.28 0.30 16 16 C -0.09 0.43 10.33 22.58 0.23 0.67 16 17 C -0.19 0.43 6.15 22.03 0.14 0.56 16 18 Br 0.09 -0.41 28.25 -20.37 -0.58 -0.98 16 19 C 0.06 0.00 6.15 41.34 0.25 0.25 16 20 C -0.04 0.01 2.90 71.24 0.21 0.22 16 21 O -0.54 -0.49 10.51 -148.98 -1.57 -2.06 16 22 Si 0.63 1.06 27.10 68.60 1.86 2.92 16 23 N -0.39 -0.48 3.16 -519.61 -1.64 -2.13 16 24 C 0.07 0.04 9.27 127.77 1.18 1.23 16 25 C -0.11 0.29 6.80 31.12 0.21 0.50 16 26 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 27 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 28 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 29 H 0.07 0.09 8.13 -2.39 -0.02 0.07 16 30 H 0.07 0.07 8.13 -2.39 -0.02 0.05 16 31 H 0.10 -0.62 8.01 -2.39 -0.02 -0.64 16 32 H 0.12 -1.40 8.14 -2.38 -0.02 -1.42 16 33 H 0.39 -5.83 7.72 -74.06 -0.57 -6.40 16 34 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 35 H 0.08 -0.17 8.08 -2.39 -0.02 -0.19 16 36 H 0.42 -5.71 6.37 -92.71 -0.59 -6.30 16 37 H 0.19 -2.52 7.49 -2.91 -0.02 -2.54 16 38 H 0.14 -0.37 7.96 -2.38 -0.02 -0.39 16 39 H 0.39 -1.20 8.70 -74.06 -0.64 -1.84 16 40 H -0.28 -1.91 7.11 99.48 0.71 -1.20 16 41 H -0.27 -2.22 7.11 99.48 0.71 -1.51 16 42 H 0.08 -0.05 8.14 -2.39 -0.02 -0.07 16 43 H 0.09 0.34 6.18 -2.39 -0.01 0.32 16 44 H 0.10 -0.07 7.12 -2.39 -0.02 -0.08 16 45 H 0.09 -0.21 8.14 -2.38 -0.02 -0.23 16 46 H 0.10 -0.04 7.40 -2.39 -0.02 -0.06 16 Total: 0.00 -23.11 396.98 -1.85 -24.97 By element: Atomic # 1 Polarization: -23.94 SS G_CDS: -0.72 Total: -24.66 kcal Atomic # 6 Polarization: 4.28 SS G_CDS: 5.51 Total: 9.79 kcal Atomic # 7 Polarization: 4.01 SS G_CDS: -4.12 Total: -0.11 kcal Atomic # 8 Polarization: -8.11 SS G_CDS: -3.81 Total: -11.92 kcal Atomic # 14 Polarization: 1.06 SS G_CDS: 1.86 Total: 2.92 kcal Atomic # 35 Polarization: -0.41 SS G_CDS: -0.58 Total: -0.98 kcal Total: -23.11 -1.85 -24.97 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_5000100.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.675 kcal (2) G-P(sol) polarization free energy of solvation -23.115 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.854 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.969 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.644 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds