Wall clock time and date at job start Sun Mar 7 2021 07:06:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.45201 * 109.46605 * 2 1 4 4 C 1.34231 * 116.99417 * 180.02562 * 3 2 1 5 5 O 1.20828 * 120.00392 * 0.02562 * 4 3 2 6 6 C 1.50698 * 119.99620 * 180.02562 * 4 3 2 7 7 H 1.09003 * 112.85420 * 48.80407 * 6 4 3 8 8 C 1.53791 * 113.61519 * 180.02562 * 6 4 3 9 9 C 1.53782 * 87.07972 * 139.97845 * 8 6 4 10 10 O 1.42903 * 113.61273 * 89.20400 * 9 8 6 11 11 C 1.53000 * 113.61027 * 220.01623 * 9 8 6 12 12 N 1.46499 * 109.46840 * 178.47186 * 11 9 8 13 13 C 1.34779 * 119.99872 * 180.02562 * 12 11 9 14 14 O 1.21278 * 120.00071 * 359.97438 * 13 12 11 15 15 C 1.50703 * 119.99944 * 180.02562 * 13 12 11 16 16 O 1.42903 * 109.46904 * 180.02562 * 15 13 12 17 17 C 1.35994 * 116.99566 * 179.97438 * 16 15 13 18 18 C 1.39157 * 120.07152 * 180.02562 * 17 16 15 19 19 O 1.35995 * 120.07188 * 0.02562 * 18 17 16 20 20 C 1.42894 * 116.99875 * 180.02562 * 19 18 17 21 21 C 1.38565 * 119.85656 * 180.02562 * 18 17 16 22 22 C 1.38248 * 119.99780 * 359.97438 * 21 18 17 23 23 C 1.50695 * 119.92831 * 180.02562 * 22 21 18 24 24 O 1.42905 * 109.47152 * 64.99891 * 23 22 21 25 25 Si 1.86299 * 109.47480 * 184.99938 * 23 22 21 26 26 C 1.38255 * 120.14754 * 359.97438 * 22 21 18 27 27 C 1.38251 * 120.14352 * 359.76803 * 26 22 21 28 28 C 1.53773 * 87.17391 * 334.61028 * 9 8 6 29 29 H 1.09003 * 109.46891 * 179.97438 * 1 2 3 30 30 H 1.08998 * 109.46641 * 299.99310 * 1 2 3 31 31 H 1.08995 * 109.47129 * 59.99868 * 1 2 3 32 32 H 1.08998 * 109.46641 * 240.00690 * 2 1 3 33 33 H 1.08996 * 109.47230 * 120.00671 * 2 1 3 34 34 H 1.08997 * 113.61334 * 25.42862 * 8 6 4 35 35 H 1.08999 * 113.61414 * 254.53047 * 8 6 4 36 36 H 0.96697 * 113.99506 * 181.52404 * 10 9 8 37 37 H 1.09002 * 109.47398 * 298.47512 * 11 9 8 38 38 H 1.09001 * 109.47194 * 58.47693 * 11 9 8 39 39 H 0.97000 * 120.00420 * 0.02562 * 12 11 9 40 40 H 1.09002 * 109.47152 * 300.00160 * 15 13 12 41 41 H 1.09001 * 109.46980 * 60.00059 * 15 13 12 42 42 H 1.09003 * 109.46923 * 180.02562 * 20 19 18 43 43 H 1.08993 * 109.47402 * 300.00038 * 20 19 18 44 44 H 1.09004 * 109.47403 * 60.00429 * 20 19 18 45 45 H 1.07997 * 120.00109 * 179.97438 * 21 18 17 46 46 H 1.09004 * 109.47224 * 305.00252 * 23 22 21 47 47 H 0.96696 * 113.99762 * 59.99851 * 24 23 22 48 48 H 1.48499 * 110.00140 * 180.02562 * 25 23 22 49 49 H 1.48506 * 109.99652 * 301.31975 * 25 23 22 50 50 H 1.07993 * 119.93008 * 180.02562 * 26 22 21 51 51 H 1.07997 * 119.99749 * 180.27703 * 27 26 22 52 52 H 1.09008 * 113.61471 * 139.94504 * 28 9 8 53 53 H 1.08999 * 113.61361 * 270.83858 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0808 0.5867 -0.0015 6 6 3.9206 2.9375 0.0000 7 1 3.4714 3.5811 0.7564 8 6 5.4582 2.9682 -0.0013 9 6 5.3554 4.1433 -0.9880 10 8 5.2831 5.4207 -0.3514 11 6 6.3967 4.0959 -2.1080 12 7 6.1943 5.2314 -3.0113 13 6 7.0004 5.3952 -4.0789 14 8 7.8936 4.6029 -4.2916 15 6 6.7925 6.5636 -5.0078 16 8 7.7642 6.5186 -6.0546 17 6 7.7151 7.5088 -6.9855 18 6 8.6307 7.5269 -8.0333 19 8 9.5763 6.5542 -8.1288 20 6 10.4832 6.6370 -9.2300 21 6 8.5770 8.5382 -8.9790 22 6 7.6148 9.5260 -8.8806 23 6 7.5573 10.6248 -9.9103 24 8 7.2230 10.0678 -11.1832 25 14 6.2622 11.8703 -9.4181 26 6 6.7044 9.5075 -7.8403 27 6 6.7492 8.4983 -6.8964 28 6 3.9842 3.5805 -1.3974 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3632 0.5137 0.8901 31 1 -0.3633 0.5138 -0.8899 32 1 1.8933 -0.5137 -0.8901 33 1 1.8934 -0.5139 0.8899 34 1 5.9124 2.0755 -0.4313 35 1 5.8902 3.2426 0.9610 36 1 5.1949 6.1619 -0.9660 37 1 7.3965 4.1481 -1.6771 38 1 6.2892 3.1651 -2.6649 39 1 5.4801 5.8653 -2.8410 40 1 5.7925 6.5121 -5.4383 41 1 6.9008 7.4943 -4.4508 42 1 11.1831 5.8024 -9.1877 43 1 9.9244 6.5950 -10.1648 44 1 11.0337 7.5763 -9.1776 45 1 9.2867 8.5548 -9.7928 46 1 8.5286 11.1158 -9.9724 47 1 6.3693 9.6142 -11.2020 48 1 6.1953 12.9588 -10.4259 49 1 4.9389 11.2068 -9.2991 50 1 5.9539 10.2806 -7.7671 51 1 6.0341 8.4836 -6.0873 52 1 3.2280 4.3485 -1.5605 53 1 4.0347 2.8555 -2.2097 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_60476.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:06:48 Heat of formation + Delta-G solvation = -211.625973 kcal Electronic energy + Delta-G solvation = -36539.091879 eV Core-core repulsion = 31345.010319 eV Total energy + Delta-G solvation = -5194.081560 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.180 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -42.15705 -41.79575 -41.03935 -40.22265 -39.25791 -38.91060 -37.77594 -37.02204 -36.01769 -35.40287 -32.69419 -32.12454 -31.49115 -30.65169 -28.77122 -28.37603 -26.99413 -26.35402 -25.92383 -23.86115 -23.47380 -22.56217 -21.94262 -21.79350 -20.77688 -19.81806 -19.22414 -18.69362 -18.49398 -18.10204 -17.78821 -17.57628 -17.42408 -17.35801 -17.24935 -16.78390 -16.64928 -16.18678 -16.11853 -15.89063 -15.79695 -15.76736 -15.38251 -15.13886 -14.87681 -14.67915 -14.45733 -14.31856 -14.18047 -13.80821 -13.77486 -13.54979 -13.51600 -13.44991 -13.25572 -12.98667 -12.76671 -12.62779 -12.58397 -12.57523 -12.28255 -12.16376 -12.12869 -11.98676 -11.75636 -11.61363 -11.58878 -11.47514 -11.05941 -10.90773 -10.60221 -10.32481 -9.77658 -8.91352 -4.87236 0.17844 0.29058 1.03675 1.34420 1.40307 1.42284 1.62726 1.64099 2.01000 2.31564 2.51741 2.56518 2.85805 3.10483 3.34061 3.41592 3.42056 3.46039 3.58107 3.67099 3.86870 3.90427 3.92165 3.94648 4.02197 4.05939 4.12161 4.15158 4.21473 4.29326 4.29754 4.30376 4.32245 4.36578 4.57745 4.58429 4.63447 4.65910 4.66917 4.68616 4.79663 4.86499 4.87560 4.90421 5.02008 5.10436 5.12722 5.13596 5.16483 5.38392 5.40774 5.60338 5.96514 6.31260 6.50136 6.53382 6.62747 6.67222 7.08283 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.101 4.101 7 H 0.147 0.853 8 C -0.111 4.111 9 C 0.118 3.882 10 O -0.537 6.537 11 C 0.108 3.892 12 N -0.706 5.706 13 C 0.514 3.486 14 O -0.572 6.572 15 C 0.034 3.966 16 O -0.316 6.316 17 C 0.086 3.914 18 C 0.076 3.924 19 O -0.335 6.335 20 C 0.021 3.979 21 C -0.153 4.153 22 C -0.116 4.116 23 C -0.086 4.086 24 O -0.551 6.551 25 Si 0.778 3.222 26 C -0.111 4.111 27 C -0.158 4.158 28 C -0.135 4.135 29 H 0.095 0.905 30 H 0.069 0.931 31 H 0.070 0.930 32 H 0.067 0.933 33 H 0.066 0.934 34 H 0.101 0.899 35 H 0.093 0.907 36 H 0.395 0.605 37 H 0.068 0.932 38 H 0.073 0.927 39 H 0.421 0.579 40 H 0.130 0.870 41 H 0.134 0.866 42 H 0.110 0.890 43 H 0.061 0.939 44 H 0.066 0.934 45 H 0.140 0.860 46 H 0.121 0.879 47 H 0.386 0.614 48 H -0.308 1.308 49 H -0.272 1.272 50 H 0.159 0.841 51 H 0.179 0.821 52 H 0.117 0.883 53 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.627 6.915 2.393 10.569 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.313 3.687 5 O -0.430 6.430 6 C -0.120 4.120 7 H 0.164 0.836 8 C -0.148 4.148 9 C 0.076 3.924 10 O -0.345 6.345 11 C -0.017 4.017 12 N -0.363 5.363 13 C 0.300 3.700 14 O -0.450 6.450 15 C -0.043 4.043 16 O -0.229 6.229 17 C 0.041 3.959 18 C 0.030 3.970 19 O -0.250 6.250 20 C -0.074 4.074 21 C -0.171 4.171 22 C -0.116 4.116 23 C -0.194 4.194 24 O -0.359 6.359 25 Si 0.683 3.317 26 C -0.129 4.129 27 C -0.176 4.176 28 C -0.172 4.172 29 H 0.113 0.887 30 H 0.088 0.912 31 H 0.089 0.911 32 H 0.085 0.915 33 H 0.084 0.916 34 H 0.119 0.881 35 H 0.111 0.889 36 H 0.247 0.753 37 H 0.086 0.914 38 H 0.092 0.908 39 H 0.260 0.740 40 H 0.148 0.852 41 H 0.152 0.848 42 H 0.128 0.872 43 H 0.080 0.920 44 H 0.084 0.916 45 H 0.158 0.842 46 H 0.138 0.862 47 H 0.235 0.765 48 H -0.237 1.237 49 H -0.198 1.198 50 H 0.176 0.824 51 H 0.196 0.804 52 H 0.135 0.865 53 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -6.747 5.972 2.546 9.363 hybrid contribution -0.212 -0.933 -1.420 1.712 sum -6.958 5.039 1.127 8.665 Atomic orbital electron populations 1.21823 0.90588 1.04254 1.03815 1.23256 0.97013 0.79427 1.02398 1.86527 1.24260 1.33381 1.83386 1.24128 0.80537 0.93057 0.70953 1.90676 1.61195 1.44318 1.46842 1.22578 0.96788 0.89580 1.03054 0.83583 1.23077 0.93488 0.97031 1.01249 1.22032 0.93314 0.85456 0.91571 1.86601 1.95979 1.14742 1.37227 1.21851 0.99689 0.89953 0.90159 1.45445 1.35150 1.29675 1.26014 1.20611 0.81241 0.86376 0.81745 1.90799 1.33930 1.46582 1.73655 1.22804 0.94393 0.98508 0.88623 1.86224 1.54177 1.46413 1.36128 1.18583 0.96477 0.91022 0.89867 1.18691 0.91640 0.91189 0.95462 1.86188 1.42580 1.46794 1.49416 1.23274 0.92104 1.04320 0.87683 1.21019 1.02011 0.94896 0.99219 1.20114 0.96455 0.97307 0.97771 1.25329 1.11000 0.99494 0.83612 1.86574 1.42890 1.75309 1.31152 0.93970 0.75476 0.75750 0.86525 1.21057 0.99077 0.98899 0.93830 1.21395 0.99152 0.94189 1.02879 1.23695 0.98373 1.01162 0.93996 0.88652 0.91195 0.91103 0.91477 0.91558 0.88053 0.88864 0.75324 0.91411 0.90846 0.74023 0.85243 0.84820 0.87162 0.92002 0.91558 0.84250 0.86151 0.76464 1.23701 1.19842 0.82443 0.80383 0.86472 0.88807 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.59 10.29 71.98 0.74 1.33 16 2 C 0.05 0.05 6.19 71.98 0.45 0.49 16 3 O -0.36 -1.08 10.22 -51.42 -0.53 -1.60 16 4 C 0.47 1.84 7.49 71.24 0.53 2.37 16 5 O -0.54 -5.77 15.65 21.96 0.34 -5.42 16 6 C -0.10 0.29 4.20 -10.95 -0.05 0.25 16 7 H 0.15 -0.81 8.14 -2.39 -0.02 -0.83 16 8 C -0.11 0.21 6.80 31.12 0.21 0.42 16 9 C 0.12 -0.75 1.46 -10.27 -0.01 -0.77 16 10 O -0.54 4.23 13.40 -148.98 -2.00 2.23 16 11 C 0.11 -0.34 5.30 86.38 0.46 0.12 16 12 N -0.71 5.19 5.34 -463.05 -2.47 2.71 16 13 C 0.51 0.63 7.91 87.66 0.69 1.32 16 14 O -0.57 -8.45 16.50 16.01 0.26 -8.19 16 15 C 0.03 -0.17 5.22 71.24 0.37 0.20 16 16 O -0.32 -2.18 9.45 -67.07 -0.63 -2.82 16 17 C 0.09 0.35 6.70 22.57 0.15 0.50 16 18 C 0.08 0.55 6.70 22.57 0.15 0.70 16 19 O -0.34 -3.58 10.28 -79.63 -0.82 -4.40 16 20 C 0.02 0.05 9.81 113.37 1.11 1.16 16 21 C -0.15 -0.47 8.67 22.35 0.19 -0.28 16 22 C -0.12 0.10 5.35 -19.86 -0.11 -0.01 16 23 C -0.09 0.17 2.80 71.23 0.20 0.37 16 24 O -0.55 -0.90 12.83 -148.98 -1.91 -2.81 16 25 Si 0.78 -3.75 29.88 68.60 2.05 -1.70 16 26 C -0.11 0.50 8.66 22.28 0.19 0.70 16 27 C -0.16 0.68 9.04 22.35 0.20 0.88 16 28 C -0.13 1.00 7.03 31.18 0.22 1.22 16 29 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 30 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 31 H 0.07 -0.31 8.14 -2.39 -0.02 -0.32 16 32 H 0.07 0.09 8.13 -2.39 -0.02 0.08 16 33 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 34 H 0.10 0.10 7.39 -2.39 -0.02 0.08 16 35 H 0.09 -0.15 8.14 -2.39 -0.02 -0.17 16 36 H 0.40 -6.48 7.41 -74.06 -0.55 -7.03 16 37 H 0.07 0.06 8.14 -2.39 -0.02 0.05 16 38 H 0.07 0.00 7.98 -2.39 -0.02 -0.02 16 39 H 0.42 -7.10 7.12 -92.71 -0.66 -7.76 16 40 H 0.13 -1.61 7.65 -2.39 -0.02 -1.63 16 41 H 0.13 -1.73 7.68 -2.39 -0.02 -1.75 16 42 H 0.11 -0.03 8.14 -2.39 -0.02 -0.04 16 43 H 0.06 0.02 7.66 -2.39 -0.02 0.01 16 44 H 0.07 -0.03 7.66 -2.38 -0.02 -0.05 16 45 H 0.14 0.26 6.30 -2.91 -0.02 0.24 16 46 H 0.12 -0.36 7.96 -2.39 -0.02 -0.38 16 47 H 0.39 -1.58 8.70 -74.06 -0.64 -2.22 16 48 H -0.31 -1.18 7.11 99.48 0.71 -0.48 16 49 H -0.27 0.72 7.00 99.48 0.70 1.42 16 50 H 0.16 -1.56 4.83 -2.91 -0.01 -1.57 16 51 H 0.18 -2.36 6.30 -2.91 -0.02 -2.37 16 52 H 0.12 -1.42 8.14 -2.38 -0.02 -1.44 16 53 H 0.09 -0.54 7.94 -2.39 -0.02 -0.56 16 Total: 0.00 -37.78 441.27 -0.84 -38.61 By element: Atomic # 1 Polarization: -26.76 SS G_CDS: -0.84 Total: -27.61 kcal Atomic # 6 Polarization: 5.28 SS G_CDS: 5.71 Total: 10.99 kcal Atomic # 7 Polarization: 5.19 SS G_CDS: -2.47 Total: 2.71 kcal Atomic # 8 Polarization: -17.73 SS G_CDS: -5.28 Total: -23.01 kcal Atomic # 14 Polarization: -3.75 SS G_CDS: 2.05 Total: -1.70 kcal Total: -37.78 -0.84 -38.61 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_60476.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -173.013 kcal (2) G-P(sol) polarization free energy of solvation -37.775 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -210.788 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.838 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.613 kcal (6) G-S(sol) free energy of system = (1) + (5) -211.626 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds