Wall clock time and date at job start Sun Mar 7 2021 07:07:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45199 * 109.47334 * 2 1 4 4 C 1.34232 * 116.99945 * 179.97438 * 3 2 1 5 5 O 1.20827 * 120.00133 * 0.02562 * 4 3 2 6 6 C 1.50696 * 119.99939 * 180.02562 * 4 3 2 7 7 H 1.08997 * 112.85150 * 48.80498 * 6 4 3 8 8 C 1.53782 * 113.61567 * 180.02562 * 6 4 3 9 9 C 1.53792 * 87.08038 * 140.06435 * 8 6 4 10 10 O 1.42899 * 113.60918 * 89.20245 * 9 8 6 11 11 C 1.52999 * 113.61157 * 220.01618 * 9 8 6 12 12 N 1.46500 * 109.46957 * 178.47052 * 11 9 8 13 13 C 1.34772 * 120.00302 * 180.02562 * 12 11 9 14 14 O 1.21696 * 119.99631 * 0.02562 * 13 12 11 15 15 C 1.46681 * 120.00085 * 180.02562 * 13 12 11 16 16 C 1.37875 * 126.23236 * 180.02562 * 15 13 12 17 17 C 1.39833 * 107.08615 * 179.74025 * 16 15 13 18 18 C 1.35454 * 107.86387 * 359.97438 * 17 16 15 19 19 C 1.50702 * 125.56530 * 180.02562 * 18 17 16 20 20 O 1.42900 * 109.47465 * 244.97975 * 19 18 17 21 21 Si 1.86304 * 109.46728 * 4.97857 * 19 18 17 22 22 N 1.35535 * 108.87121 * 0.02562 * 18 17 16 23 23 C 1.53778 * 87.17139 * 334.61098 * 9 8 6 24 24 H 1.09009 * 109.46769 * 60.00111 * 1 2 3 25 25 H 1.08993 * 109.47235 * 179.97438 * 1 2 3 26 26 H 1.08994 * 109.47410 * 300.00482 * 1 2 3 27 27 H 1.09002 * 109.47579 * 239.99842 * 2 1 3 28 28 H 1.09004 * 109.47182 * 120.00017 * 2 1 3 29 29 H 1.09003 * 113.61464 * 25.52148 * 8 6 4 30 30 H 1.08995 * 113.69358 * 254.62159 * 8 6 4 31 31 H 0.96698 * 113.99709 * 181.52784 * 10 9 8 32 32 H 1.09004 * 109.46990 * 58.48047 * 11 9 8 33 33 H 1.08996 * 109.47376 * 298.47058 * 11 9 8 34 34 H 0.97008 * 119.99736 * 0.02562 * 12 11 9 35 35 H 1.07997 * 126.45730 * 359.75831 * 16 15 13 36 36 H 1.07992 * 126.06953 * 179.97438 * 17 16 15 37 37 H 1.08997 * 109.47062 * 124.97754 * 19 18 17 38 38 H 0.96695 * 114.00007 * 179.97438 * 20 19 18 39 39 H 1.48497 * 110.00105 * 299.99563 * 21 19 18 40 40 H 1.48499 * 110.00186 * 61.32149 * 21 19 18 41 41 H 0.97004 * 125.67280 * 180.02562 * 22 18 17 42 42 H 1.08998 * 113.61085 * 139.93780 * 23 9 8 43 43 H 1.08996 * 113.61656 * 270.83913 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5447 0.0005 5 8 4.0808 0.5865 0.0005 6 6 3.9208 2.9373 0.0012 7 1 3.4710 3.5811 0.7570 8 6 5.4583 2.9679 0.0011 9 6 5.3565 4.1443 -0.9843 10 8 5.2837 5.4208 -0.3461 11 6 6.3986 4.0981 -2.1035 12 7 6.1970 5.2347 -3.0056 13 6 7.0039 5.3998 -4.0724 14 8 7.8997 4.6044 -4.2865 15 6 6.8024 6.5381 -4.9752 16 6 7.5472 6.8293 -6.0984 17 6 7.0086 7.9918 -6.6585 18 6 5.9670 8.3816 -5.8853 19 6 5.1003 9.5906 -6.1267 20 8 5.2784 10.5251 -5.0604 21 14 5.5836 10.3889 -7.7392 22 7 5.8313 7.5067 -4.8590 23 6 3.9855 3.5820 -1.3954 24 1 -0.3633 0.5139 -0.8901 25 1 -0.3633 -1.0276 -0.0005 26 1 -0.3634 0.5139 0.8899 27 1 1.8934 -0.5138 -0.8900 28 1 1.8933 -0.5138 0.8900 29 1 5.9128 2.0757 -0.4297 30 1 5.8910 3.2408 0.9635 31 1 5.1960 6.1628 -0.9599 32 1 6.2914 3.1680 -2.6617 33 1 7.3981 4.1498 -1.6718 34 1 5.4827 5.8685 -2.8351 35 1 8.3880 6.2656 -6.4747 36 1 7.3606 8.4904 -7.5494 37 1 4.0550 9.2852 -6.1714 38 1 4.7500 11.3298 -5.1503 39 1 7.0068 10.8099 -7.6911 40 1 5.3727 9.4380 -8.8601 41 1 5.1610 7.5549 -4.1595 42 1 3.2296 4.3502 -1.5581 43 1 4.0365 2.8580 -2.2086 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_6580494.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:07:04 Heat of formation + Delta-G solvation = -123.381368 kcal Electronic energy + Delta-G solvation = -27308.367094 eV Core-core repulsion = 23129.351959 eV Total energy + Delta-G solvation = -4179.015135 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.145 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.61303 -42.11076 -40.81280 -39.83479 -37.82950 -37.67776 -36.12992 -35.53147 -32.75873 -32.38828 -31.70705 -29.82262 -27.30643 -27.04833 -25.94157 -23.92746 -23.07323 -22.02381 -21.62288 -21.29465 -20.91794 -20.05953 -18.79464 -18.67728 -17.94267 -17.73960 -17.44609 -17.16429 -16.81393 -16.57350 -16.25802 -15.87539 -15.52540 -15.23709 -15.11121 -14.96213 -14.81315 -14.40905 -14.37147 -14.18125 -13.98421 -13.78904 -13.67402 -13.51464 -13.33054 -13.02035 -12.85706 -12.77262 -12.66164 -12.42717 -12.06688 -11.85160 -11.55505 -11.50830 -11.26852 -11.06849 -10.64955 -10.41684 -10.15346 -9.32993 -5.10398 0.26686 1.04379 1.12265 1.43515 1.57705 1.62303 1.79050 1.91005 1.99557 2.29008 2.59483 2.95383 3.12834 3.19513 3.27356 3.32031 3.65495 3.67559 3.81344 3.91031 3.96391 4.00940 4.02517 4.15351 4.20794 4.25373 4.32535 4.39782 4.41872 4.57551 4.63857 4.68522 4.75668 4.77033 4.90611 4.94163 4.97161 4.97768 5.04406 5.43067 5.51248 5.72104 6.05829 6.19141 6.25646 6.36130 6.71400 6.97643 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.471 3.529 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.099 4.099 9 C 0.096 3.904 10 O -0.528 6.528 11 C 0.105 3.895 12 N -0.734 5.734 13 C 0.595 3.405 14 O -0.517 6.517 15 C -0.052 4.052 16 C -0.093 4.093 17 C -0.206 4.206 18 C 0.071 3.929 19 C -0.060 4.060 20 O -0.549 6.549 21 Si 0.717 3.283 22 N -0.522 5.522 23 C -0.146 4.146 24 H 0.067 0.933 25 H 0.082 0.918 26 H 0.068 0.932 27 H 0.071 0.929 28 H 0.071 0.929 29 H 0.116 0.884 30 H 0.095 0.905 31 H 0.376 0.624 32 H 0.087 0.913 33 H 0.086 0.914 34 H 0.390 0.610 35 H 0.155 0.845 36 H 0.144 0.856 37 H 0.076 0.924 38 H 0.388 0.612 39 H -0.247 1.247 40 H -0.252 1.252 41 H 0.416 0.584 42 H 0.090 0.910 43 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.671 5.539 -1.072 9.523 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.391 6.391 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.137 4.137 9 C 0.054 3.946 10 O -0.334 6.334 11 C -0.019 4.019 12 N -0.388 5.388 13 C 0.382 3.618 14 O -0.392 6.392 15 C -0.165 4.165 16 C -0.119 4.119 17 C -0.230 4.230 18 C -0.047 4.047 19 C -0.169 4.169 20 O -0.356 6.356 21 Si 0.615 3.385 22 N -0.119 5.119 23 C -0.183 4.183 24 H 0.086 0.914 25 H 0.100 0.900 26 H 0.087 0.913 27 H 0.089 0.911 28 H 0.090 0.910 29 H 0.134 0.866 30 H 0.114 0.886 31 H 0.224 0.776 32 H 0.106 0.894 33 H 0.104 0.896 34 H 0.224 0.776 35 H 0.172 0.828 36 H 0.162 0.838 37 H 0.094 0.906 38 H 0.236 0.764 39 H -0.171 1.171 40 H -0.176 1.176 41 H 0.253 0.747 42 H 0.108 0.892 43 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -5.919 3.709 -1.018 7.059 hybrid contribution -0.884 -0.008 0.400 0.970 sum -6.803 3.701 -0.618 7.769 Atomic orbital electron populations 1.21821 0.92300 1.03299 1.03642 1.23100 0.95637 0.79821 1.02801 1.86515 1.24337 1.32796 1.83668 1.23496 0.80724 0.92261 0.72209 1.90692 1.60509 1.42883 1.45015 1.22434 0.97281 0.91082 1.01294 0.85009 1.23049 0.93240 0.96511 1.00900 1.22409 0.93670 0.85556 0.92937 1.86620 1.96056 1.14443 1.36275 1.21987 1.00106 0.89868 0.89891 1.45755 1.35234 1.29746 1.28017 1.16965 0.81557 0.83659 0.79598 1.90899 1.31809 1.43745 1.72734 1.20360 0.97943 0.95526 1.02699 1.21308 0.99993 0.96890 0.93738 1.20603 0.98819 1.00504 1.03082 1.19967 0.99941 0.93288 0.91524 1.24518 1.00042 0.89553 1.02833 1.86482 1.70609 1.32260 1.46260 0.95123 0.83739 0.86078 0.73543 1.41887 1.26470 1.20709 1.22786 1.23711 0.98138 1.00996 0.95499 0.91408 0.89963 0.91336 0.91093 0.91021 0.86615 0.88611 0.77615 0.89440 0.89556 0.77605 0.82762 0.83835 0.90611 0.76392 1.17142 1.17639 0.74653 0.89153 0.88268 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.25 10.29 37.16 0.38 0.64 16 2 C 0.06 0.02 6.19 37.16 0.23 0.25 16 3 O -0.36 -0.57 10.22 -39.26 -0.40 -0.97 16 4 C 0.47 0.88 7.49 36.00 0.27 1.15 16 5 O -0.50 -2.35 15.65 -18.75 -0.29 -2.64 16 6 C -0.10 0.09 4.19 -90.87 -0.38 -0.29 16 7 H 0.13 -0.22 8.14 -51.93 -0.42 -0.65 16 8 C -0.10 0.08 6.80 -25.91 -0.18 -0.09 16 9 C 0.10 -0.20 1.46 -89.80 -0.13 -0.33 16 10 O -0.53 1.02 13.40 -35.23 -0.47 0.55 16 11 C 0.10 -0.09 5.30 -4.04 -0.02 -0.11 16 12 N -0.73 0.98 5.34 -61.62 -0.33 0.65 16 13 C 0.59 1.48 7.79 -12.85 -0.10 1.38 16 14 O -0.52 -3.36 16.88 5.19 0.09 -3.27 16 15 C -0.05 -0.10 7.06 -81.98 -0.58 -0.68 16 16 C -0.09 -0.28 10.65 -39.12 -0.42 -0.69 16 17 C -0.21 -0.45 9.32 -39.98 -0.37 -0.82 16 18 C 0.07 0.05 6.50 -81.95 -0.53 -0.48 16 19 C -0.06 0.13 3.07 36.01 0.11 0.24 16 20 O -0.55 1.18 12.86 -35.23 -0.45 0.72 16 21 Si 0.72 -1.94 30.56 -169.99 -5.19 -7.13 16 22 N -0.52 0.24 5.99 -5.69 -0.03 0.21 16 23 C -0.15 0.36 7.03 -25.83 -0.18 0.18 16 24 H 0.07 -0.11 8.14 -51.92 -0.42 -0.54 16 25 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 26 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 27 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 28 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 29 H 0.12 -0.03 7.40 -51.93 -0.38 -0.41 16 30 H 0.10 -0.07 8.14 -51.93 -0.42 -0.50 16 31 H 0.38 -1.96 7.42 45.56 0.34 -1.62 16 32 H 0.09 -0.02 7.98 -51.93 -0.41 -0.44 16 33 H 0.09 0.04 8.14 -51.93 -0.42 -0.39 16 34 H 0.39 -1.77 6.25 -40.82 -0.26 -2.02 16 35 H 0.15 0.39 8.06 -52.49 -0.42 -0.03 16 36 H 0.14 0.20 6.19 -52.49 -0.32 -0.13 16 37 H 0.08 -0.32 7.96 -51.93 -0.41 -0.74 16 38 H 0.39 -2.75 8.74 45.56 0.40 -2.35 16 39 H -0.25 -0.21 7.11 56.52 0.40 0.20 16 40 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 41 H 0.42 -1.54 8.19 -40.82 -0.33 -1.87 16 42 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 43 H 0.10 -0.20 7.94 -51.93 -0.41 -0.62 16 LS Contribution 367.63 15.07 5.54 5.54 Total: 0.00 -11.79 367.63 -8.67 -20.47 By element: Atomic # 1 Polarization: -9.23 SS G_CDS: -5.23 Total: -14.45 kcal Atomic # 6 Polarization: 2.23 SS G_CDS: -1.90 Total: 0.33 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -0.36 Total: 0.86 kcal Atomic # 8 Polarization: -4.08 SS G_CDS: -1.53 Total: -5.61 kcal Atomic # 14 Polarization: -1.94 SS G_CDS: -5.19 Total: -7.13 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -11.79 -8.67 -20.47 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_6580494.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.915 kcal (2) G-P(sol) polarization free energy of solvation -11.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.707 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.675 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.467 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.381 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds