Wall clock time and date at job start Sun Mar 7 2021 07:07:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45200 * 109.46985 * 2 1 4 4 C 1.34233 * 116.99945 * 180.02562 * 3 2 1 5 5 O 1.20835 * 119.99842 * 359.97438 * 4 3 2 6 6 C 1.50696 * 120.00453 * 179.97438 * 4 3 2 7 7 H 1.09002 * 112.84182 * 311.19399 * 6 4 3 8 8 C 1.53779 * 113.61713 * 82.49646 * 6 4 3 9 9 C 1.53783 * 87.08150 * 139.98303 * 8 6 4 10 10 O 1.42900 * 113.61197 * 89.11378 * 9 8 6 11 11 C 1.53002 * 113.69219 * 220.00909 * 9 8 6 12 12 N 1.46494 * 109.46828 * 282.53681 * 11 9 8 13 13 C 1.34777 * 119.99856 * 180.02562 * 12 11 9 14 14 O 1.21698 * 119.99923 * 0.02562 * 13 12 11 15 15 C 1.46576 * 120.00273 * 179.97438 * 13 12 11 16 16 C 1.36646 * 125.46328 * 180.02562 * 15 13 12 17 17 C 1.37468 * 113.30192 * 180.02562 * 16 15 13 18 18 C 1.50708 * 122.45128 * 180.02562 * 17 16 15 19 19 C 1.33817 * 115.10381 * 359.97438 * 17 16 15 20 20 C 1.50694 * 124.52537 * 180.02562 * 19 17 16 21 21 O 1.42897 * 109.47216 * 313.64419 * 20 19 17 22 22 Si 1.86308 * 109.46927 * 193.64717 * 20 19 17 23 23 S 1.70624 * 110.94847 * 359.72865 * 19 17 16 24 24 C 1.53783 * 87.08320 * 334.57057 * 9 8 6 25 25 H 1.09000 * 109.47457 * 300.00777 * 1 2 3 26 26 H 1.09005 * 109.47086 * 60.00272 * 1 2 3 27 27 H 1.08999 * 109.47703 * 180.02562 * 1 2 3 28 28 H 1.08996 * 109.47019 * 239.99439 * 2 1 3 29 29 H 1.08999 * 109.46681 * 119.99575 * 2 1 3 30 30 H 1.09003 * 113.61709 * 254.53478 * 8 6 4 31 31 H 1.09003 * 113.61393 * 25.43851 * 8 6 4 32 32 H 0.96702 * 113.99761 * 82.50473 * 10 9 8 33 33 H 1.09002 * 109.46954 * 42.53723 * 11 9 8 34 34 H 1.08998 * 109.46558 * 162.53552 * 11 9 8 35 35 H 0.97003 * 120.00233 * 359.97438 * 12 11 9 36 36 H 1.08009 * 123.35079 * 359.97438 * 16 15 13 37 37 H 1.09002 * 109.47015 * 95.81590 * 18 17 16 38 38 H 1.09001 * 109.46808 * 215.82104 * 18 17 16 39 39 H 1.08998 * 109.46857 * 335.81935 * 18 17 16 40 40 H 1.08995 * 109.47359 * 73.65124 * 20 19 17 41 41 H 0.96698 * 114.00210 * 300.00553 * 21 20 19 42 42 H 1.48500 * 109.99793 * 179.97438 * 22 20 19 43 43 H 1.48492 * 109.99834 * 301.31912 * 22 20 19 44 44 H 1.09001 * 113.61166 * 270.89003 * 24 9 8 45 45 H 1.08991 * 113.61949 * 139.97811 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0808 0.5866 -0.0005 6 6 3.9208 2.9374 -0.0012 7 1 3.4709 3.5811 -0.7571 8 6 3.9868 3.5774 1.3956 9 6 5.3569 4.1427 0.9855 10 8 5.2819 5.4201 0.3494 11 6 6.4007 4.0959 2.1032 12 7 6.1485 5.1827 3.0527 13 6 6.9485 5.3389 4.1260 14 8 7.8806 4.5775 4.3062 15 6 6.6965 6.4265 5.0758 16 6 7.4338 6.6872 6.1964 17 6 6.9752 7.7693 6.9095 18 6 7.6356 8.2392 8.1801 19 6 5.9001 8.3756 6.3925 20 6 5.2241 9.5786 6.9982 21 8 5.0498 9.3709 8.4012 22 14 3.5610 9.8260 6.1958 23 16 5.4018 7.6097 4.9516 24 6 5.4583 2.9680 -0.0017 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0276 0.0005 28 1 1.8933 -0.5139 -0.8899 29 1 1.8932 -0.5138 0.8900 30 1 3.2298 4.3441 1.5608 31 1 4.0392 2.8511 2.2066 32 1 5.2179 6.1630 0.9652 33 1 6.3361 3.1388 2.6208 34 1 7.3965 4.2111 1.6752 35 1 5.4062 5.7902 2.9084 36 1 8.2911 6.1009 6.4928 37 1 8.3326 9.0452 7.9506 38 1 6.8754 8.6020 8.8719 39 1 8.1763 7.4101 8.6365 40 1 5.8410 10.4623 6.8356 41 1 4.5097 8.5994 8.6206 42 1 2.8839 11.0091 6.7849 43 1 3.7261 10.0113 4.7317 44 1 5.9129 2.0751 0.4274 45 1 5.8892 3.2427 -0.9644 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_6739946.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:07:14 Heat of formation + Delta-G solvation = -141.238651 kcal Electronic energy + Delta-G solvation = -29031.318250 eV Core-core repulsion = 24722.343162 eV Total energy + Delta-G solvation = -4308.975087 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.122 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.14387 -41.06744 -40.33245 -39.67531 -37.66324 -37.47137 -36.05997 -35.47598 -32.73563 -32.40700 -30.24108 -29.89048 -27.23825 -26.92666 -25.72866 -24.38958 -23.71324 -21.95704 -21.91489 -20.87870 -20.36399 -19.73409 -18.78242 -18.17308 -17.73436 -17.62562 -17.41481 -17.16104 -16.87873 -16.68803 -16.43542 -16.15577 -15.87581 -15.38588 -15.16405 -14.85484 -14.82264 -14.51474 -14.45164 -14.26448 -14.02994 -13.92751 -13.64983 -13.55650 -13.33254 -13.19161 -13.02316 -12.94264 -12.80107 -12.63177 -12.55888 -12.38784 -12.31726 -11.86512 -11.78802 -11.53016 -11.46327 -11.18198 -11.02959 -10.71669 -10.39759 -9.83367 -9.53612 -5.28619 -0.70797 0.18265 0.58328 1.02871 1.15256 1.21855 1.40559 1.60516 1.76003 1.82407 2.08792 2.64426 2.99606 3.17741 3.22796 3.31068 3.35750 3.48212 3.64944 3.84018 3.93302 3.98700 4.05542 4.06408 4.22959 4.23248 4.27547 4.32275 4.43944 4.46044 4.51694 4.58947 4.67324 4.71183 4.76046 4.78116 4.79488 4.80602 4.97652 4.97932 5.00059 5.06797 5.32918 5.40817 5.45718 6.11988 6.26809 6.30729 6.74196 6.95733 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.471 3.529 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.146 4.146 9 C 0.096 3.904 10 O -0.530 6.530 11 C 0.105 3.895 12 N -0.730 5.730 13 C 0.595 3.405 14 O -0.519 6.519 15 C -0.263 4.263 16 C -0.045 4.045 17 C -0.084 4.084 18 C -0.109 4.109 19 C -0.237 4.237 20 C -0.026 4.026 21 O -0.529 6.529 22 Si 0.649 3.351 23 S 0.192 5.808 24 C -0.100 4.100 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.081 0.919 28 H 0.071 0.929 29 H 0.071 0.929 30 H 0.092 0.908 31 H 0.099 0.901 32 H 0.378 0.622 33 H 0.088 0.912 34 H 0.086 0.914 35 H 0.395 0.605 36 H 0.156 0.844 37 H 0.069 0.931 38 H 0.095 0.905 39 H 0.066 0.934 40 H 0.125 0.875 41 H 0.382 0.618 42 H -0.230 1.230 43 H -0.234 1.234 44 H 0.115 0.885 45 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.797 1.756 1.031 6.145 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.184 4.184 9 C 0.054 3.946 10 O -0.335 6.335 11 C -0.019 4.019 12 N -0.383 5.383 13 C 0.381 3.619 14 O -0.396 6.396 15 C -0.383 4.383 16 C -0.078 4.078 17 C -0.097 4.097 18 C -0.168 4.168 19 C -0.356 4.356 20 C -0.139 4.139 21 O -0.334 6.334 22 Si 0.549 3.451 23 S 0.460 5.540 24 C -0.137 4.137 25 H 0.086 0.914 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.110 0.890 31 H 0.118 0.882 32 H 0.226 0.774 33 H 0.106 0.894 34 H 0.104 0.896 35 H 0.229 0.771 36 H 0.173 0.827 37 H 0.087 0.913 38 H 0.113 0.887 39 H 0.085 0.915 40 H 0.142 0.858 41 H 0.230 0.770 42 H -0.153 1.153 43 H -0.158 1.158 44 H 0.133 0.867 45 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -6.238 1.835 -0.900 6.564 hybrid contribution 1.351 0.296 1.385 1.957 sum -4.887 2.131 0.485 5.353 Atomic orbital electron populations 1.21822 0.92313 1.03275 1.03658 1.23093 0.95629 0.79852 1.02775 1.86518 1.24342 1.32750 1.83663 1.23517 0.80715 0.92282 0.72169 1.90692 1.60516 1.42904 1.45068 1.22410 0.97255 0.91061 1.01363 0.84986 1.23675 0.98195 1.01057 0.95428 1.22394 0.93710 0.85584 0.92903 1.86601 1.96256 1.14345 1.36315 1.21995 0.99808 0.91135 0.88951 1.45729 1.33062 1.33717 1.25810 1.16898 0.81915 0.83059 0.79985 1.90885 1.29745 1.44480 1.74453 1.24545 1.05780 1.04326 1.03613 1.20782 0.99277 0.95968 0.91813 1.18749 0.95389 0.95963 0.99611 1.20779 1.01105 1.01386 0.93487 1.24389 1.03333 1.05467 1.02408 1.24449 1.07997 0.95217 0.86220 1.86484 1.74893 1.52131 1.19936 0.94977 0.79810 0.89796 0.80545 1.82852 1.28711 1.20871 1.21531 1.23055 0.93280 0.96546 1.00861 0.91372 0.91351 0.89998 0.91062 0.91095 0.88964 0.88234 0.77383 0.89376 0.89565 0.77073 0.82670 0.91275 0.88689 0.91542 0.85837 0.77007 1.15325 1.15819 0.86654 0.88661 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.16 0.38 0.66 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.50 10.22 -39.27 -0.40 -0.90 16 4 C 0.47 0.78 7.48 36.00 0.27 1.05 16 5 O -0.50 -2.24 15.65 -18.76 -0.29 -2.53 16 6 C -0.10 0.11 4.19 -90.96 -0.38 -0.27 16 7 H 0.13 -0.24 8.14 -51.93 -0.42 -0.67 16 8 C -0.15 0.38 7.02 -25.92 -0.18 0.20 16 9 C 0.10 -0.21 1.41 -89.80 -0.13 -0.34 16 10 O -0.53 1.03 13.41 -35.23 -0.47 0.56 16 11 C 0.10 -0.12 5.26 -4.04 -0.02 -0.14 16 12 N -0.73 1.04 5.31 -61.65 -0.33 0.71 16 13 C 0.60 1.07 7.78 -12.90 -0.10 0.97 16 14 O -0.52 -2.98 16.84 5.19 0.09 -2.89 16 15 C -0.26 -0.14 6.45 -36.80 -0.24 -0.37 16 16 C -0.05 -0.04 9.78 -40.44 -0.40 -0.43 16 17 C -0.08 0.01 5.75 -106.45 -0.61 -0.60 16 18 C -0.11 0.09 9.74 36.01 0.35 0.44 16 19 C -0.24 0.28 5.61 -35.86 -0.20 0.08 16 20 C -0.03 0.05 2.68 36.00 0.10 0.15 16 21 O -0.53 1.03 10.27 -35.23 -0.36 0.67 16 22 Si 0.65 -1.76 30.97 -169.99 -5.26 -7.02 16 23 S 0.19 -0.40 19.34 -107.50 -2.08 -2.48 16 24 C -0.10 0.11 6.80 -25.92 -0.18 -0.07 16 25 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 26 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 28 H 0.07 0.02 8.13 -51.93 -0.42 -0.41 16 29 H 0.07 0.01 8.13 -51.93 -0.42 -0.42 16 30 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 31 H 0.10 -0.24 7.99 -51.93 -0.42 -0.65 16 32 H 0.38 -1.88 7.60 45.56 0.35 -1.54 16 33 H 0.09 -0.06 8.06 -51.93 -0.42 -0.47 16 34 H 0.09 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.39 -1.59 6.44 -40.82 -0.26 -1.86 16 36 H 0.16 0.15 8.06 -52.48 -0.42 -0.28 16 37 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 38 H 0.09 -0.09 5.55 -51.93 -0.29 -0.37 16 39 H 0.07 -0.08 8.10 -51.93 -0.42 -0.50 16 40 H 0.12 -0.20 7.96 -51.93 -0.41 -0.61 16 41 H 0.38 -2.07 8.70 45.56 0.40 -1.67 16 42 H -0.23 -0.06 7.11 56.52 0.40 0.34 16 43 H -0.23 0.27 7.11 56.52 0.40 0.67 16 44 H 0.12 -0.06 7.39 -51.93 -0.38 -0.44 16 45 H 0.09 -0.09 8.14 -51.93 -0.42 -0.52 16 LS Contribution 389.92 15.07 5.88 5.88 Total: 0.00 -9.23 389.92 -10.05 -19.28 By element: Atomic # 1 Polarization: -7.12 SS G_CDS: -5.71 Total: -12.83 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: -1.10 Total: 1.56 kcal Atomic # 7 Polarization: 1.04 SS G_CDS: -0.33 Total: 0.71 kcal Atomic # 8 Polarization: -3.65 SS G_CDS: -1.44 Total: -5.09 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: -5.26 Total: -7.02 kcal Atomic # 16 Polarization: -0.40 SS G_CDS: -2.08 Total: -2.48 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -9.23 -10.05 -19.28 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_6739946.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.960 kcal (2) G-P(sol) polarization free energy of solvation -9.230 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.190 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.049 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.279 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.239 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds