Wall clock time and date at job start Sun Mar 7 2021 07:07:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45207 * 109.46696 * 2 1 4 4 C 1.34230 * 116.99531 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00301 * 359.97438 * 4 3 2 6 6 C 1.50700 * 119.99957 * 180.02562 * 4 3 2 7 7 H 1.09003 * 112.85007 * 48.79842 * 6 4 3 8 8 C 1.53783 * 113.61670 * 180.02562 * 6 4 3 9 9 C 1.53784 * 87.07911 * 140.06135 * 8 6 4 10 10 O 1.42904 * 113.61445 * 89.20257 * 9 8 6 11 11 C 1.53001 * 113.60943 * 220.01456 * 9 8 6 12 12 N 1.46505 * 109.46789 * 178.47246 * 11 9 8 13 13 C 1.34777 * 119.99909 * 180.02562 * 12 11 9 14 14 O 1.21561 * 119.99939 * 359.97438 * 13 12 11 15 15 C 1.47838 * 120.00000 * 180.27934 * 13 12 11 16 16 C 1.39558 * 120.14375 * 173.20803 * 15 13 12 17 17 C 1.50699 * 120.07682 * 359.97438 * 16 15 13 18 18 C 1.37983 * 119.85302 * 179.71923 * 16 15 13 19 19 C 1.38346 * 120.13989 * 0.53047 * 18 16 15 20 20 C 1.50697 * 119.84910 * 179.74222 * 19 18 16 21 21 C 1.38369 * 120.29328 * 359.76439 * 19 18 16 22 22 C 1.50700 * 119.92549 * 179.97438 * 21 19 18 23 23 O 1.42898 * 109.47298 * 74.98001 * 22 21 19 24 24 Si 1.86307 * 109.47235 * 194.97533 * 22 21 19 25 25 C 1.37939 * 120.14883 * 359.95653 * 21 19 18 26 26 C 1.53777 * 87.17443 * 334.60765 * 9 8 6 27 27 H 1.08998 * 109.46997 * 179.97438 * 1 2 3 28 28 H 1.09005 * 109.47463 * 300.00100 * 1 2 3 29 29 H 1.09007 * 109.47277 * 60.00191 * 1 2 3 30 30 H 1.08998 * 109.47177 * 240.00167 * 2 1 3 31 31 H 1.08994 * 109.47189 * 119.99505 * 2 1 3 32 32 H 1.08999 * 113.61214 * 25.51285 * 8 6 4 33 33 H 1.08998 * 113.60915 * 254.61382 * 8 6 4 34 34 H 0.96698 * 113.99741 * 181.52406 * 10 9 8 35 35 H 1.09004 * 109.47018 * 58.47721 * 11 9 8 36 36 H 1.08994 * 109.47405 * 298.47292 * 11 9 8 37 37 H 0.96999 * 120.00275 * 0.02562 * 12 11 9 38 38 H 1.09000 * 109.46966 * 83.41138 * 17 16 15 39 39 H 1.08993 * 109.47677 * 203.41215 * 17 16 15 40 40 H 1.09003 * 109.47000 * 323.41563 * 17 16 15 41 41 H 1.07992 * 119.93219 * 180.24600 * 18 16 15 42 42 H 1.09001 * 109.47374 * 270.02184 * 20 19 18 43 43 H 1.09002 * 109.47340 * 30.02427 * 20 19 18 44 44 H 1.08999 * 109.46788 * 150.01987 * 20 19 18 45 45 H 1.08997 * 109.47275 * 314.97843 * 22 21 19 46 46 H 0.96708 * 114.00457 * 179.97438 * 23 22 21 47 47 H 1.48494 * 110.00136 * 300.00121 * 24 22 21 48 48 H 1.48499 * 109.99733 * 61.32001 * 24 22 21 49 49 H 1.08000 * 120.07358 * 180.02562 * 25 21 19 50 50 H 1.08996 * 113.61184 * 139.94050 * 26 9 8 51 51 H 1.08998 * 113.61395 * 270.84182 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3691 0.0000 4 6 3.3446 1.5449 0.0005 5 8 4.0807 0.5868 0.0015 6 6 3.9206 2.9375 0.0012 7 1 3.4707 3.5813 0.7570 8 6 5.4581 2.9682 0.0011 9 6 5.3562 4.1445 -0.9843 10 8 5.2833 5.4211 -0.3463 11 6 6.3984 4.0983 -2.1035 12 7 6.1967 5.2349 -3.0057 13 6 7.0037 5.3999 -4.0725 14 8 7.8992 4.6060 -4.2858 15 6 6.8041 6.5503 -4.9794 16 6 7.7206 6.8049 -6.0006 17 6 8.9177 5.9077 -6.1820 18 6 7.5254 7.8768 -6.8472 19 6 6.4299 8.7047 -6.6785 20 6 6.2262 9.8770 -7.6033 21 6 5.5208 8.4614 -5.6641 22 6 4.3307 9.3690 -5.4875 23 8 3.3668 9.0941 -6.5059 24 14 3.5673 9.0734 -3.8139 25 6 5.7012 7.3899 -4.8144 26 6 3.9853 3.5821 -1.3955 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5137 0.8900 32 1 5.9126 2.0760 -0.4295 33 1 5.8893 3.2415 0.9641 34 1 5.1956 6.1631 -0.9601 35 1 6.2913 3.1681 -2.6616 36 1 7.3978 4.1500 -1.6718 37 1 5.4824 5.8686 -2.8353 38 1 8.6313 5.0333 -6.7664 39 1 9.7041 6.4522 -6.7046 40 1 9.2837 5.5884 -5.2061 41 1 8.2316 8.0726 -7.6404 42 1 6.7249 10.7548 -7.1926 43 1 6.6463 9.6450 -8.5820 44 1 5.1598 10.0789 -7.7044 45 1 4.6518 10.4079 -5.5620 46 1 2.5719 9.6426 -6.4536 47 1 3.1253 7.6604 -3.6997 48 1 4.5497 9.3863 -2.7452 49 1 4.9906 7.2009 -4.0233 50 1 3.2293 4.3502 -1.5583 51 1 4.0365 2.8580 -2.2086 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_9599494.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:07:29 Heat of formation + Delta-G solvation = -145.920095 kcal Electronic energy + Delta-G solvation = -33371.010179 eV Core-core repulsion = 28817.142224 eV Total energy + Delta-G solvation = -4553.867955 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.19001 -41.62867 -40.61334 -39.75069 -37.75138 -37.62835 -36.14517 -35.62637 -34.47109 -33.52043 -32.71863 -30.30468 -29.12555 -28.39566 -27.14928 -26.28001 -25.44987 -23.91008 -23.71800 -22.43431 -21.89960 -21.10022 -20.88787 -19.23410 -18.67030 -18.55244 -17.92295 -17.70524 -17.43043 -17.22019 -16.82791 -16.63345 -16.46211 -16.15991 -15.98202 -15.32679 -15.11668 -15.02312 -14.92119 -14.85698 -14.67581 -14.39397 -14.28600 -13.99622 -13.95813 -13.84130 -13.65550 -13.49325 -13.30124 -13.08117 -13.00092 -12.93973 -12.79658 -12.73319 -12.63358 -12.58342 -12.39417 -12.11595 -11.96936 -11.78128 -11.53076 -11.46693 -11.05770 -10.71018 -10.44131 -10.32896 -9.95902 -9.65034 -5.15434 -0.28233 0.10365 1.09116 1.14726 1.44332 1.60683 1.72342 1.74047 1.86874 2.56600 2.62902 2.98991 3.20306 3.22495 3.30062 3.35082 3.48596 3.51946 3.72237 3.76359 3.83742 3.93318 3.98682 4.03390 4.05353 4.10450 4.24058 4.27556 4.30755 4.43263 4.43630 4.45826 4.49273 4.58995 4.60151 4.67194 4.69764 4.71059 4.77880 4.79166 4.81922 4.90008 4.96693 5.00033 5.00182 5.04467 5.11836 5.31018 5.41986 5.45350 5.50377 5.75262 6.16317 6.24934 6.49034 6.73813 7.04874 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.471 3.529 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.098 4.098 9 C 0.094 3.906 10 O -0.529 6.529 11 C 0.104 3.896 12 N -0.732 5.732 13 C 0.564 3.436 14 O -0.519 6.519 15 C -0.147 4.147 16 C -0.007 4.007 17 C -0.124 4.124 18 C -0.131 4.131 19 C -0.023 4.023 20 C -0.126 4.126 21 C -0.091 4.091 22 C -0.069 4.069 23 O -0.543 6.543 24 Si 0.676 3.324 25 C -0.080 4.080 26 C -0.147 4.147 27 H 0.082 0.918 28 H 0.068 0.932 29 H 0.067 0.933 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.116 0.884 33 H 0.095 0.905 34 H 0.375 0.625 35 H 0.087 0.913 36 H 0.086 0.914 37 H 0.392 0.608 38 H 0.079 0.921 39 H 0.062 0.938 40 H 0.096 0.904 41 H 0.136 0.864 42 H 0.076 0.924 43 H 0.072 0.928 44 H 0.083 0.917 45 H 0.076 0.924 46 H 0.382 0.618 47 H -0.250 1.250 48 H -0.250 1.250 49 H 0.120 0.880 50 H 0.090 0.910 51 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.292 6.148 -0.610 8.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.314 3.686 5 O -0.391 6.391 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.136 4.136 9 C 0.053 3.947 10 O -0.334 6.334 11 C -0.019 4.019 12 N -0.386 5.386 13 C 0.352 3.648 14 O -0.396 6.396 15 C -0.150 4.150 16 C -0.008 4.008 17 C -0.180 4.180 18 C -0.149 4.149 19 C -0.023 4.023 20 C -0.183 4.183 21 C -0.091 4.091 22 C -0.179 4.179 23 O -0.349 6.349 24 Si 0.577 3.423 25 C -0.098 4.098 26 C -0.185 4.185 27 H 0.100 0.900 28 H 0.087 0.913 29 H 0.086 0.914 30 H 0.089 0.911 31 H 0.090 0.910 32 H 0.134 0.866 33 H 0.114 0.886 34 H 0.223 0.777 35 H 0.105 0.895 36 H 0.104 0.896 37 H 0.227 0.773 38 H 0.098 0.902 39 H 0.081 0.919 40 H 0.114 0.886 41 H 0.154 0.846 42 H 0.095 0.905 43 H 0.091 0.909 44 H 0.102 0.898 45 H 0.094 0.906 46 H 0.230 0.770 47 H -0.175 1.175 48 H -0.174 1.174 49 H 0.137 0.863 50 H 0.108 0.892 51 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -3.896 3.968 0.381 5.574 hybrid contribution -0.160 0.470 -0.701 0.859 sum -4.056 4.438 -0.321 6.021 Atomic orbital electron populations 1.21823 0.92296 1.03285 1.03661 1.23098 0.95648 0.79828 1.02781 1.86520 1.24325 1.32781 1.83656 1.23487 0.80728 0.92240 0.72180 1.90687 1.60508 1.42883 1.45059 1.22441 0.97283 0.91091 1.01278 0.84991 1.23040 0.93244 0.96454 1.00835 1.22428 0.93772 0.85521 0.92999 1.86601 1.96068 1.14476 1.36295 1.21979 0.99985 0.90010 0.89935 1.45840 1.35304 1.29577 1.27905 1.18190 0.81317 0.85052 0.80213 1.90772 1.31280 1.44647 1.72932 1.19546 0.98063 0.97829 0.99578 1.20111 0.94872 0.94406 0.91433 1.21130 0.93927 0.98144 1.04791 1.21061 0.98308 0.95181 1.00304 1.20023 0.92567 0.95880 0.93833 1.20989 1.04055 0.95178 0.98056 1.19042 0.96406 0.96551 0.97148 1.24610 0.90701 0.99749 1.02884 1.86521 1.31267 1.64829 1.52291 0.95085 0.87642 0.84164 0.75394 1.21006 0.96508 0.93915 0.98417 1.23721 0.98193 1.01031 0.95518 0.89973 0.91333 0.91386 0.91102 0.91031 0.86613 0.88615 0.77670 0.89482 0.89605 0.77292 0.90242 0.91920 0.88578 0.84641 0.90549 0.90921 0.89798 0.90608 0.76996 1.17462 1.17426 0.86295 0.89162 0.88217 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.21 10.29 37.16 0.38 0.59 16 2 C 0.06 0.04 6.19 37.16 0.23 0.27 16 3 O -0.36 -0.73 10.22 -39.26 -0.40 -1.13 16 4 C 0.47 1.11 7.49 36.01 0.27 1.38 16 5 O -0.50 -2.54 15.65 -18.75 -0.29 -2.83 16 6 C -0.10 0.02 4.19 -90.87 -0.38 -0.36 16 7 H 0.13 -0.14 8.14 -51.93 -0.42 -0.57 16 8 C -0.10 0.03 6.80 -25.92 -0.18 -0.15 16 9 C 0.09 -0.10 1.46 -89.81 -0.13 -0.23 16 10 O -0.53 0.39 13.40 -35.23 -0.47 -0.08 16 11 C 0.10 0.00 5.30 -4.04 -0.02 -0.02 16 12 N -0.73 -0.20 5.29 -61.25 -0.32 -0.52 16 13 C 0.56 1.76 7.70 -12.33 -0.09 1.67 16 14 O -0.52 -2.98 13.35 5.31 0.07 -2.91 16 15 C -0.15 -0.39 5.87 -104.97 -0.62 -1.01 16 16 C -0.01 -0.02 5.91 -104.22 -0.62 -0.63 16 17 C -0.12 -0.27 8.73 36.01 0.31 0.04 16 18 C -0.13 -0.17 9.31 -39.63 -0.37 -0.54 16 19 C -0.02 -0.02 5.89 -104.54 -0.62 -0.64 16 20 C -0.13 0.13 9.31 36.00 0.34 0.47 16 21 C -0.09 -0.11 5.29 -104.68 -0.55 -0.66 16 22 C -0.07 0.10 1.87 36.01 0.07 0.17 16 23 O -0.54 0.74 11.89 -35.23 -0.42 0.32 16 24 Si 0.68 -1.96 30.19 -169.99 -5.13 -7.09 16 25 C -0.08 -0.12 8.13 -39.19 -0.32 -0.43 16 26 C -0.15 0.19 7.03 -25.83 -0.18 0.01 16 27 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 28 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.07 0.05 8.13 -51.93 -0.42 -0.38 16 31 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 32 H 0.12 0.02 7.40 -51.93 -0.38 -0.36 16 33 H 0.10 -0.03 8.14 -51.93 -0.42 -0.46 16 34 H 0.38 -1.27 7.41 45.56 0.34 -0.93 16 35 H 0.09 0.04 7.98 -51.93 -0.41 -0.37 16 36 H 0.09 0.07 8.14 -51.93 -0.42 -0.35 16 37 H 0.39 -0.70 5.20 -40.82 -0.21 -0.91 16 38 H 0.08 0.20 8.14 -51.93 -0.42 -0.22 16 39 H 0.06 0.03 8.04 -51.93 -0.42 -0.39 16 40 H 0.10 0.36 5.87 -51.93 -0.30 0.06 16 41 H 0.14 -0.09 8.06 -52.49 -0.42 -0.51 16 42 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 43 H 0.07 -0.11 8.08 -51.93 -0.42 -0.53 16 44 H 0.08 -0.08 6.18 -51.93 -0.32 -0.41 16 45 H 0.08 -0.24 7.38 -51.93 -0.38 -0.62 16 46 H 0.38 -2.39 8.74 45.56 0.40 -1.99 16 47 H -0.25 0.21 6.74 56.52 0.38 0.59 16 48 H -0.25 0.19 7.11 56.52 0.40 0.60 16 49 H 0.12 -0.03 3.29 -52.49 -0.17 -0.20 16 50 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 51 H 0.10 -0.10 7.94 -51.93 -0.41 -0.51 16 LS Contribution 411.73 15.07 6.20 6.20 Total: 0.00 -9.59 411.73 -10.24 -19.83 By element: Atomic # 1 Polarization: -4.71 SS G_CDS: -7.00 Total: -11.70 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: -2.48 Total: -0.09 kcal Atomic # 7 Polarization: -0.20 SS G_CDS: -0.32 Total: -0.52 kcal Atomic # 8 Polarization: -5.12 SS G_CDS: -1.51 Total: -6.63 kcal Atomic # 14 Polarization: -1.96 SS G_CDS: -5.13 Total: -7.09 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -9.59 -10.24 -19.83 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_9599494.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.090 kcal (2) G-P(sol) polarization free energy of solvation -9.591 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.681 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.239 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.830 kcal (6) G-S(sol) free energy of system = (1) + (5) -145.920 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds