Wall clock time and date at job start Sun Mar 7 2021 07:07:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45207 * 109.46696 * 2 1 4 4 C 1.34230 * 116.99531 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00301 * 359.97438 * 4 3 2 6 6 C 1.50700 * 119.99957 * 180.02562 * 4 3 2 7 7 H 1.09003 * 112.85007 * 48.79842 * 6 4 3 8 8 C 1.53783 * 113.61670 * 180.02562 * 6 4 3 9 9 C 1.53784 * 87.07911 * 140.06135 * 8 6 4 10 10 O 1.42904 * 113.61445 * 89.20257 * 9 8 6 11 11 C 1.53001 * 113.60943 * 220.01456 * 9 8 6 12 12 N 1.46505 * 109.46789 * 178.47246 * 11 9 8 13 13 C 1.34777 * 119.99909 * 180.02562 * 12 11 9 14 14 O 1.21561 * 119.99939 * 359.97438 * 13 12 11 15 15 C 1.47838 * 120.00000 * 180.27934 * 13 12 11 16 16 C 1.39558 * 120.14375 * 173.20803 * 15 13 12 17 17 C 1.50699 * 120.07682 * 359.97438 * 16 15 13 18 18 C 1.37983 * 119.85302 * 179.71923 * 16 15 13 19 19 C 1.38346 * 120.13989 * 0.53047 * 18 16 15 20 20 C 1.50697 * 119.84910 * 179.74222 * 19 18 16 21 21 C 1.38369 * 120.29328 * 359.76439 * 19 18 16 22 22 C 1.50700 * 119.92549 * 179.97438 * 21 19 18 23 23 O 1.42898 * 109.47298 * 74.98001 * 22 21 19 24 24 Si 1.86307 * 109.47235 * 194.97533 * 22 21 19 25 25 C 1.37939 * 120.14883 * 359.95653 * 21 19 18 26 26 C 1.53777 * 87.17443 * 334.60765 * 9 8 6 27 27 H 1.08998 * 109.46997 * 179.97438 * 1 2 3 28 28 H 1.09005 * 109.47463 * 300.00100 * 1 2 3 29 29 H 1.09007 * 109.47277 * 60.00191 * 1 2 3 30 30 H 1.08998 * 109.47177 * 240.00167 * 2 1 3 31 31 H 1.08994 * 109.47189 * 119.99505 * 2 1 3 32 32 H 1.08999 * 113.61214 * 25.51285 * 8 6 4 33 33 H 1.08998 * 113.60915 * 254.61382 * 8 6 4 34 34 H 0.96698 * 113.99741 * 181.52406 * 10 9 8 35 35 H 1.09004 * 109.47018 * 58.47721 * 11 9 8 36 36 H 1.08994 * 109.47405 * 298.47292 * 11 9 8 37 37 H 0.96999 * 120.00275 * 0.02562 * 12 11 9 38 38 H 1.09000 * 109.46966 * 83.41138 * 17 16 15 39 39 H 1.08993 * 109.47677 * 203.41215 * 17 16 15 40 40 H 1.09003 * 109.47000 * 323.41563 * 17 16 15 41 41 H 1.07992 * 119.93219 * 180.24600 * 18 16 15 42 42 H 1.09001 * 109.47374 * 270.02184 * 20 19 18 43 43 H 1.09002 * 109.47340 * 30.02427 * 20 19 18 44 44 H 1.08999 * 109.46788 * 150.01987 * 20 19 18 45 45 H 1.08997 * 109.47275 * 314.97843 * 22 21 19 46 46 H 0.96708 * 114.00457 * 179.97438 * 23 22 21 47 47 H 1.48494 * 110.00136 * 300.00121 * 24 22 21 48 48 H 1.48499 * 109.99733 * 61.32001 * 24 22 21 49 49 H 1.08000 * 120.07358 * 180.02562 * 25 21 19 50 50 H 1.08996 * 113.61184 * 139.94050 * 26 9 8 51 51 H 1.08998 * 113.61395 * 270.84182 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3691 0.0000 4 6 3.3446 1.5449 0.0005 5 8 4.0807 0.5868 0.0015 6 6 3.9206 2.9375 0.0012 7 1 3.4707 3.5813 0.7570 8 6 5.4581 2.9682 0.0011 9 6 5.3562 4.1445 -0.9843 10 8 5.2833 5.4211 -0.3463 11 6 6.3984 4.0983 -2.1035 12 7 6.1967 5.2349 -3.0057 13 6 7.0037 5.3999 -4.0725 14 8 7.8992 4.6060 -4.2858 15 6 6.8041 6.5503 -4.9794 16 6 7.7206 6.8049 -6.0006 17 6 8.9177 5.9077 -6.1820 18 6 7.5254 7.8768 -6.8472 19 6 6.4299 8.7047 -6.6785 20 6 6.2262 9.8770 -7.6033 21 6 5.5208 8.4614 -5.6641 22 6 4.3307 9.3690 -5.4875 23 8 3.3668 9.0941 -6.5059 24 14 3.5673 9.0734 -3.8139 25 6 5.7012 7.3899 -4.8144 26 6 3.9853 3.5821 -1.3955 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5137 0.8900 32 1 5.9126 2.0760 -0.4295 33 1 5.8893 3.2415 0.9641 34 1 5.1956 6.1631 -0.9601 35 1 6.2913 3.1681 -2.6616 36 1 7.3978 4.1500 -1.6718 37 1 5.4824 5.8686 -2.8353 38 1 8.6313 5.0333 -6.7664 39 1 9.7041 6.4522 -6.7046 40 1 9.2837 5.5884 -5.2061 41 1 8.2316 8.0726 -7.6404 42 1 6.7249 10.7548 -7.1926 43 1 6.6463 9.6450 -8.5820 44 1 5.1598 10.0789 -7.7044 45 1 4.6518 10.4079 -5.5620 46 1 2.5719 9.6426 -6.4536 47 1 3.1253 7.6604 -3.6997 48 1 4.5497 9.3863 -2.7452 49 1 4.9906 7.2009 -4.0233 50 1 3.2293 4.3502 -1.5583 51 1 4.0365 2.8580 -2.2086 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_9599494.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:07:28 Heat of formation + Delta-G solvation = -146.337621 kcal Electronic energy + Delta-G solvation = -33371.028285 eV Core-core repulsion = 28817.142224 eV Total energy + Delta-G solvation = -4553.886061 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.28202 -41.75744 -40.68130 -39.85986 -37.84495 -37.59091 -36.23478 -35.68545 -34.51665 -33.56676 -32.71723 -30.35112 -29.17231 -28.40007 -27.11285 -26.33468 -25.46142 -23.92275 -23.74112 -22.54784 -22.00134 -21.19133 -20.89057 -19.30877 -18.80486 -18.36598 -18.00215 -17.82353 -17.47277 -17.28724 -16.87329 -16.75775 -16.50208 -16.19419 -16.00873 -15.39207 -15.09116 -15.01844 -14.93703 -14.87633 -14.73583 -14.44450 -14.31557 -13.98296 -13.92720 -13.85619 -13.61921 -13.49231 -13.35888 -13.12107 -13.02599 -12.91467 -12.84335 -12.74141 -12.64102 -12.62024 -12.39301 -12.04647 -11.90851 -11.81655 -11.62449 -11.54898 -11.08901 -10.90985 -10.48130 -10.25182 -10.02580 -9.72677 -4.91914 -0.39600 0.03541 0.97474 1.29945 1.52924 1.54849 1.67933 1.77404 1.93765 2.48274 2.69053 2.99854 3.20652 3.26047 3.31182 3.36771 3.44791 3.48487 3.71693 3.81084 3.89171 3.91774 3.99063 4.03544 4.09885 4.11747 4.20015 4.26715 4.37845 4.45765 4.47247 4.48376 4.50983 4.56314 4.61197 4.67693 4.70984 4.76696 4.77348 4.80655 4.81808 4.84833 4.93371 4.99721 5.00889 5.08260 5.14010 5.23585 5.36180 5.36595 5.39874 5.70398 6.09569 6.38416 6.57257 6.87845 6.93552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.471 3.529 5 O -0.537 6.537 6 C -0.099 4.099 7 H 0.146 0.854 8 C -0.102 4.102 9 C 0.108 3.892 10 O -0.536 6.536 11 C 0.107 3.893 12 N -0.719 5.719 13 C 0.559 3.441 14 O -0.554 6.554 15 C -0.164 4.164 16 C -0.026 4.026 17 C -0.118 4.118 18 C -0.135 4.135 19 C -0.030 4.030 20 C -0.124 4.124 21 C -0.105 4.105 22 C -0.079 4.079 23 O -0.560 6.560 24 Si 0.754 3.246 25 C -0.087 4.087 26 C -0.140 4.140 27 H 0.096 0.904 28 H 0.069 0.931 29 H 0.069 0.931 30 H 0.067 0.933 31 H 0.068 0.932 32 H 0.107 0.893 33 H 0.097 0.903 34 H 0.387 0.613 35 H 0.081 0.919 36 H 0.076 0.924 37 H 0.403 0.597 38 H 0.070 0.930 39 H 0.079 0.921 40 H 0.077 0.923 41 H 0.152 0.848 42 H 0.090 0.910 43 H 0.077 0.923 44 H 0.086 0.914 45 H 0.095 0.905 46 H 0.403 0.597 47 H -0.277 1.277 48 H -0.279 1.279 49 H 0.131 0.869 50 H 0.106 0.894 51 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.819 8.017 -0.847 10.559 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.315 3.685 5 O -0.427 6.427 6 C -0.118 4.118 7 H 0.164 0.836 8 C -0.140 4.140 9 C 0.066 3.934 10 O -0.343 6.343 11 C -0.017 4.017 12 N -0.373 5.373 13 C 0.348 3.652 14 O -0.433 6.433 15 C -0.167 4.167 16 C -0.027 4.027 17 C -0.174 4.174 18 C -0.153 4.153 19 C -0.031 4.031 20 C -0.180 4.180 21 C -0.105 4.105 22 C -0.188 4.188 23 O -0.370 6.370 24 Si 0.658 3.342 25 C -0.105 4.105 26 C -0.178 4.178 27 H 0.115 0.885 28 H 0.088 0.912 29 H 0.088 0.912 30 H 0.086 0.914 31 H 0.086 0.914 32 H 0.125 0.875 33 H 0.115 0.885 34 H 0.237 0.763 35 H 0.099 0.901 36 H 0.095 0.905 37 H 0.240 0.760 38 H 0.088 0.912 39 H 0.097 0.903 40 H 0.095 0.905 41 H 0.170 0.830 42 H 0.108 0.892 43 H 0.096 0.904 44 H 0.104 0.896 45 H 0.113 0.887 46 H 0.254 0.746 47 H -0.204 1.204 48 H -0.205 1.205 49 H 0.148 0.852 50 H 0.125 0.875 51 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -5.476 5.886 0.135 8.040 hybrid contribution 0.287 -0.099 -0.632 0.701 sum -5.189 5.786 -0.497 7.788 Atomic orbital electron populations 1.21828 0.90571 1.04316 1.03786 1.23278 0.97037 0.79292 1.02498 1.86528 1.24163 1.33560 1.83354 1.23980 0.80616 0.92824 0.71061 1.90670 1.61141 1.44125 1.46716 1.22532 0.97012 0.89857 1.02355 0.83612 1.23043 0.93370 0.96503 1.01064 1.22214 0.93547 0.85475 0.92181 1.86581 1.96035 1.14788 1.36939 1.21951 0.99992 0.89655 0.90063 1.45726 1.34919 1.29630 1.27040 1.18405 0.81129 0.84947 0.80697 1.90753 1.32795 1.45883 1.73907 1.19634 0.98927 0.98149 0.99973 1.20270 0.95139 0.95171 0.92164 1.21025 0.94519 0.98088 1.03741 1.21289 0.98884 0.94721 1.00381 1.20374 0.92243 0.96347 0.94088 1.21027 1.04415 0.94718 0.97863 1.19487 0.97467 0.96722 0.96826 1.24795 0.90131 1.00095 1.03822 1.86467 1.32349 1.65841 1.52381 0.94227 0.85486 0.81815 0.72691 1.21186 0.96315 0.93967 0.99044 1.23711 0.98237 1.01130 0.94733 0.88507 0.91163 0.91223 0.91437 0.91361 0.87458 0.88454 0.76312 0.90057 0.90546 0.75990 0.91162 0.90255 0.90457 0.83005 0.89201 0.90387 0.89563 0.88745 0.74565 1.20411 1.20502 0.85158 0.87515 0.88544 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.44 10.29 71.98 0.74 1.18 16 2 C 0.05 0.10 6.19 71.98 0.45 0.55 16 3 O -0.36 -1.63 10.22 -51.42 -0.53 -2.15 16 4 C 0.47 2.60 7.49 71.24 0.53 3.13 16 5 O -0.54 -6.22 15.65 21.98 0.34 -5.87 16 6 C -0.10 0.03 4.19 -10.95 -0.05 -0.02 16 7 H 0.15 -0.43 8.14 -2.39 -0.02 -0.44 16 8 C -0.10 -0.02 6.80 31.12 0.21 0.19 16 9 C 0.11 -0.19 1.46 -10.27 -0.01 -0.20 16 10 O -0.54 1.07 13.40 -148.98 -2.00 -0.93 16 11 C 0.11 0.13 5.30 86.38 0.46 0.59 16 12 N -0.72 -1.11 5.29 -465.96 -2.47 -3.57 16 13 C 0.56 4.48 7.70 86.78 0.67 5.15 16 14 O -0.55 -7.78 13.35 -3.91 -0.05 -7.83 16 15 C -0.16 -1.09 5.87 -20.09 -0.12 -1.21 16 16 C -0.03 -0.17 5.91 -19.61 -0.12 -0.29 16 17 C -0.12 -0.74 8.73 71.24 0.62 -0.12 16 18 C -0.14 -0.38 9.31 22.23 0.21 -0.17 16 19 C -0.03 -0.05 5.89 -19.81 -0.12 -0.17 16 20 C -0.12 0.42 9.31 71.23 0.66 1.08 16 21 C -0.10 -0.20 5.29 -19.90 -0.11 -0.31 16 22 C -0.08 0.34 1.87 71.24 0.13 0.48 16 23 O -0.56 2.36 11.89 -148.98 -1.77 0.59 16 24 Si 0.75 -5.23 30.19 68.60 2.07 -3.16 16 25 C -0.09 -0.28 8.13 22.53 0.18 -0.10 16 26 C -0.14 0.38 7.03 31.18 0.22 0.60 16 27 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 28 H 0.07 -0.22 8.14 -2.38 -0.02 -0.23 16 29 H 0.07 -0.21 8.14 -2.38 -0.02 -0.23 16 30 H 0.07 0.16 8.13 -2.39 -0.02 0.14 16 31 H 0.07 0.16 8.13 -2.39 -0.02 0.14 16 32 H 0.11 0.22 7.40 -2.39 -0.02 0.21 16 33 H 0.10 -0.01 8.14 -2.39 -0.02 -0.03 16 34 H 0.39 -2.89 7.41 -74.06 -0.55 -3.44 16 35 H 0.08 0.22 7.98 -2.39 -0.02 0.20 16 36 H 0.08 0.27 8.14 -2.39 -0.02 0.25 16 37 H 0.40 -1.34 5.20 -92.71 -0.48 -1.82 16 38 H 0.07 0.52 8.14 -2.39 -0.02 0.51 16 39 H 0.08 0.15 8.04 -2.39 -0.02 0.13 16 40 H 0.08 0.79 5.87 -2.39 -0.01 0.78 16 41 H 0.15 -0.24 8.06 -2.91 -0.02 -0.26 16 42 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 43 H 0.08 -0.34 8.08 -2.39 -0.02 -0.36 16 44 H 0.09 -0.31 6.18 -2.39 -0.01 -0.32 16 45 H 0.09 -0.78 7.38 -2.39 -0.02 -0.80 16 46 H 0.40 -5.81 8.74 -74.05 -0.65 -6.46 16 47 H -0.28 0.69 6.74 99.48 0.67 1.36 16 48 H -0.28 0.62 7.11 99.48 0.71 1.32 16 49 H 0.13 -0.07 3.29 -2.91 -0.01 -0.08 16 50 H 0.11 -0.61 8.14 -2.39 -0.02 -0.63 16 51 H 0.10 -0.16 7.94 -2.39 -0.02 -0.18 16 Total: 0.00 -23.43 411.73 -0.52 -23.94 By element: Atomic # 1 Polarization: -10.70 SS G_CDS: -0.69 Total: -11.39 kcal Atomic # 6 Polarization: 5.80 SS G_CDS: 4.57 Total: 10.37 kcal Atomic # 7 Polarization: -1.11 SS G_CDS: -2.47 Total: -3.57 kcal Atomic # 8 Polarization: -12.19 SS G_CDS: -4.00 Total: -16.20 kcal Atomic # 14 Polarization: -5.23 SS G_CDS: 2.07 Total: -3.16 kcal Total: -23.43 -0.52 -23.94 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_9599494.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.394 kcal (2) G-P(sol) polarization free energy of solvation -23.427 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.821 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.517 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.943 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.338 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds