Wall clock time and date at job start Sun Mar 7 2021 07:07:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45206 * 109.47213 * 2 1 4 4 C 1.34228 * 117.00159 * 179.97438 * 3 2 1 5 5 O 1.20826 * 119.99868 * 0.02562 * 4 3 2 6 6 C 1.50700 * 119.99900 * 180.02562 * 4 3 2 7 7 H 1.08990 * 112.90740 * 48.75446 * 6 4 3 8 8 C 1.53787 * 113.61012 * 180.02562 * 6 4 3 9 9 C 1.53780 * 87.07950 * 139.97954 * 8 6 4 10 10 O 1.42908 * 113.61263 * 89.19658 * 9 8 6 11 11 C 1.52999 * 113.61445 * 220.01626 * 9 8 6 12 12 N 1.46503 * 109.46849 * 180.02562 * 11 9 8 13 13 C 1.34780 * 119.99796 * 180.02562 * 12 11 9 14 14 O 1.21281 * 119.99991 * 359.97438 * 13 12 11 15 15 C 1.50697 * 119.99892 * 179.97438 * 13 12 11 16 16 N 1.46500 * 109.47103 * 180.02562 * 15 13 12 17 17 C 1.36839 * 125.06001 * 265.02571 * 16 15 13 18 18 C 1.34237 * 109.93653 * 179.97438 * 17 16 15 19 19 C 1.50695 * 126.49829 * 179.97438 * 18 17 16 20 20 O 1.42900 * 109.47325 * 255.02441 * 19 18 17 21 21 Si 1.86300 * 109.47389 * 15.02997 * 19 18 17 22 22 C 1.46494 * 107.00005 * 0.24448 * 18 17 16 23 23 C 1.39587 * 134.03798 * 180.47251 * 22 18 17 24 24 C 1.36655 * 119.76770 * 179.63852 * 23 22 18 25 25 C 1.38792 * 120.52772 * 359.67692 * 24 23 22 26 26 C 1.37787 * 120.66349 * 0.02572 * 25 24 23 27 27 C 1.37689 * 125.06528 * 85.02343 * 16 15 13 28 28 C 1.53777 * 113.61258 * 277.49743 * 6 4 3 29 29 H 1.09000 * 109.46986 * 59.99523 * 1 2 3 30 30 H 1.08997 * 109.47031 * 180.02562 * 1 2 3 31 31 H 1.08995 * 109.47007 * 299.99939 * 1 2 3 32 32 H 1.09003 * 109.47373 * 240.00056 * 2 1 3 33 33 H 1.08999 * 109.47281 * 119.99755 * 2 1 3 34 34 H 1.08995 * 113.61435 * 25.43293 * 8 6 4 35 35 H 1.08999 * 113.68886 * 254.54192 * 8 6 4 36 36 H 0.96703 * 113.99846 * 181.52832 * 10 9 8 37 37 H 1.08994 * 109.47006 * 60.00644 * 11 9 8 38 38 H 1.09004 * 109.47095 * 299.99710 * 11 9 8 39 39 H 0.97001 * 120.00480 * 359.97438 * 12 11 9 40 40 H 1.09002 * 109.47234 * 59.99843 * 15 13 12 41 41 H 1.09005 * 109.47430 * 299.99671 * 15 13 12 42 42 H 1.07991 * 125.03147 * 359.97438 * 17 16 15 43 43 H 1.09004 * 109.46897 * 135.02953 * 19 18 17 44 44 H 0.96706 * 114.00057 * 179.97438 * 20 19 18 45 45 H 1.48495 * 109.99824 * 299.99970 * 21 19 18 46 46 H 1.48498 * 109.99663 * 61.31609 * 21 19 18 47 47 H 1.08006 * 120.11453 * 359.34376 * 23 22 18 48 48 H 1.08007 * 119.73844 * 179.70110 * 24 23 22 49 49 H 1.08003 * 119.66609 * 180.02562 * 25 24 23 50 50 H 1.08000 * 120.10824 * 180.02562 * 26 25 24 51 51 H 1.09005 * 113.60982 * 105.47493 * 28 6 4 52 52 H 1.09004 * 113.61750 * 334.57158 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3448 1.5449 0.0005 5 8 4.0808 0.5867 0.0005 6 6 3.9207 2.9375 0.0012 7 1 3.4709 3.5823 0.7560 8 6 5.4583 2.9681 0.0011 9 6 5.3565 4.1429 -0.9860 10 8 5.2836 5.4205 -0.3497 11 6 6.3986 4.0951 -2.1051 12 7 6.2205 5.2507 -2.9879 13 6 7.0317 5.4179 -4.0512 14 8 7.9093 4.6119 -4.2769 15 6 6.8481 6.6062 -4.9595 16 7 7.8452 6.5599 -6.0318 17 6 9.0500 7.2085 -6.0134 18 6 9.7228 6.9566 -7.1473 19 6 11.0862 7.4820 -7.5161 20 8 10.9500 8.5156 -8.4934 21 14 11.9188 8.1688 -5.9976 22 6 8.8777 6.0792 -7.9609 23 6 9.0242 5.4783 -9.2122 24 6 8.0261 4.6858 -9.7054 25 6 6.8700 4.4680 -8.9691 26 6 6.7071 5.0464 -7.7291 27 6 7.7098 5.8573 -7.2081 28 6 3.9867 3.5774 -1.3956 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0276 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 1.8934 -0.5138 -0.8900 33 1 1.8934 -0.5138 0.8900 34 1 5.9127 2.0753 -0.4282 35 1 5.8909 3.2424 0.9632 36 1 5.1959 6.1616 -0.9646 37 1 6.2739 3.1768 -2.6787 38 1 7.3985 4.1201 -1.6719 39 1 5.5183 5.8952 -2.8075 40 1 6.9731 7.5247 -4.3860 41 1 5.8480 6.5816 -5.3926 42 1 9.4067 7.8309 -5.2061 43 1 11.6892 6.6717 -7.9260 44 1 11.7900 8.9012 -8.7779 45 1 11.1066 9.2744 -5.4292 46 1 12.0951 7.0960 -4.9861 47 1 9.9214 5.6429 -9.7907 48 1 8.1380 4.2249 -10.6758 49 1 6.0901 3.8388 -9.3721 50 1 5.8040 4.8705 -7.1637 51 1 3.2297 4.3440 -1.5608 52 1 4.0391 2.8510 -2.2067 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_9818708.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:07:33 Heat of formation + Delta-G solvation = -100.008779 kcal Electronic energy + Delta-G solvation = -35789.195355 eV Core-core repulsion = 30915.440072 eV Total energy + Delta-G solvation = -4873.755283 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.176 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -42.66371 -42.18923 -41.05140 -40.14137 -38.12724 -37.82934 -37.60908 -36.11902 -35.48739 -34.29012 -32.72462 -31.70323 -30.40516 -30.19638 -28.65144 -27.07433 -26.45148 -25.46776 -23.93700 -23.72753 -22.79980 -22.00162 -21.85731 -20.85128 -20.64394 -19.37952 -18.76262 -18.36216 -18.27474 -17.85527 -17.82227 -17.52164 -17.43828 -16.87693 -16.67241 -16.52326 -16.21965 -15.78840 -15.53999 -15.32784 -15.07840 -14.98037 -14.87034 -14.84837 -14.63915 -14.51171 -14.25373 -14.19419 -13.85497 -13.64220 -13.57906 -13.46356 -13.26662 -13.02617 -12.83809 -12.76459 -12.65217 -12.61357 -12.49475 -12.34889 -12.07603 -11.83245 -11.82471 -11.62543 -11.55545 -11.30069 -11.00198 -10.65334 -10.42203 -10.19207 -9.26684 -8.74607 -4.98635 0.03879 0.55886 0.98850 1.26514 1.28712 1.31522 1.47745 1.56756 1.68183 1.96124 1.99578 2.77461 2.87740 3.03147 3.26600 3.35030 3.38818 3.45444 3.48834 3.59977 3.65815 3.79284 3.84485 3.91523 3.96601 3.99034 4.01300 4.14373 4.17631 4.21553 4.22819 4.26640 4.35082 4.50983 4.51034 4.55304 4.60249 4.60680 4.70501 4.74896 4.80159 4.82797 4.83025 4.84918 5.03785 5.06342 5.07332 5.08851 5.36887 5.43451 5.57617 5.64238 5.65421 6.01017 6.13246 6.25780 6.57054 6.58274 6.94920 6.98559 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.101 4.101 7 H 0.146 0.854 8 C -0.111 4.111 9 C 0.117 3.883 10 O -0.537 6.537 11 C 0.109 3.891 12 N -0.707 5.707 13 C 0.493 3.507 14 O -0.570 6.570 15 C 0.087 3.913 16 N -0.468 5.468 17 C 0.054 3.946 18 C -0.181 4.181 19 C -0.047 4.047 20 O -0.565 6.565 21 Si 0.784 3.216 22 C -0.120 4.120 23 C -0.083 4.083 24 C -0.151 4.151 25 C -0.103 4.103 26 C -0.136 4.136 27 C 0.090 3.910 28 C -0.134 4.134 29 H 0.070 0.930 30 H 0.096 0.904 31 H 0.069 0.931 32 H 0.067 0.933 33 H 0.066 0.934 34 H 0.101 0.899 35 H 0.092 0.908 36 H 0.394 0.606 37 H 0.072 0.928 38 H 0.064 0.936 39 H 0.420 0.580 40 H 0.159 0.841 41 H 0.152 0.848 42 H 0.176 0.824 43 H 0.073 0.927 44 H 0.399 0.601 45 H -0.279 1.279 46 H -0.302 1.302 47 H 0.127 0.873 48 H 0.143 0.857 49 H 0.150 0.850 50 H 0.136 0.864 51 H 0.116 0.884 52 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.539 5.276 0.688 6.994 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.314 3.686 5 O -0.430 6.430 6 C -0.120 4.120 7 H 0.164 0.836 8 C -0.148 4.148 9 C 0.075 3.925 10 O -0.345 6.345 11 C -0.015 4.015 12 N -0.363 5.363 13 C 0.279 3.721 14 O -0.448 6.448 15 C -0.038 4.038 16 N -0.150 5.150 17 C -0.072 4.072 18 C -0.188 4.188 19 C -0.156 4.156 20 O -0.374 6.374 21 Si 0.689 3.311 22 C -0.124 4.124 23 C -0.101 4.101 24 C -0.170 4.170 25 C -0.122 4.122 26 C -0.156 4.156 27 C -0.015 4.015 28 C -0.172 4.172 29 H 0.089 0.911 30 H 0.114 0.886 31 H 0.088 0.912 32 H 0.086 0.914 33 H 0.085 0.915 34 H 0.119 0.881 35 H 0.111 0.889 36 H 0.246 0.754 37 H 0.091 0.909 38 H 0.083 0.917 39 H 0.259 0.741 40 H 0.177 0.823 41 H 0.170 0.830 42 H 0.193 0.807 43 H 0.091 0.909 44 H 0.249 0.751 45 H -0.205 1.205 46 H -0.230 1.230 47 H 0.145 0.855 48 H 0.161 0.839 49 H 0.168 0.832 50 H 0.154 0.846 51 H 0.134 0.866 52 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -4.602 4.072 2.255 6.546 hybrid contribution -0.492 -0.492 -0.338 0.773 sum -5.094 3.580 1.917 6.514 Atomic orbital electron populations 1.21824 0.90551 1.04295 1.03814 1.23268 0.97038 0.79362 1.02428 1.86526 1.24204 1.33462 1.83360 1.24090 0.80572 0.92995 0.70983 1.90676 1.61204 1.44279 1.46828 1.22531 0.96747 0.89690 1.02988 0.83610 1.23074 0.93545 0.96994 1.01216 1.22037 0.93367 0.85419 0.91635 1.86610 1.95989 1.14737 1.37172 1.21820 0.99558 0.89563 0.90604 1.45607 1.35805 1.27880 1.27021 1.21430 0.81229 0.87590 0.81855 1.90821 1.34793 1.46294 1.72898 1.22021 0.94646 0.98847 0.88258 1.43378 1.15779 1.41440 1.14444 1.21724 0.86121 0.99615 0.99716 1.20061 0.97645 1.05294 0.95837 1.24225 0.95041 0.93482 1.02861 1.86481 1.37166 1.53142 1.60648 0.94229 0.85566 0.77721 0.73595 1.19354 0.94835 1.01827 0.96356 1.20496 0.99785 0.96215 0.93611 1.20982 0.94143 1.00450 1.01444 1.21202 0.98360 0.99114 0.93488 1.20270 0.98228 0.99561 0.97534 1.18478 0.97454 0.98272 0.87295 1.23651 0.98315 1.01137 0.94066 0.91098 0.88584 0.91215 0.91433 0.91536 0.88081 0.88917 0.75439 0.90930 0.91742 0.74138 0.82309 0.83022 0.80725 0.90865 0.75055 1.20519 1.22966 0.85486 0.83902 0.83224 0.84637 0.86602 0.88783 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.57 10.29 71.98 0.74 1.31 16 2 C 0.05 0.05 6.19 71.98 0.45 0.50 16 3 O -0.36 -1.15 10.22 -51.40 -0.53 -1.68 16 4 C 0.47 1.95 7.48 71.24 0.53 2.48 16 5 O -0.54 -5.85 15.65 21.96 0.34 -5.50 16 6 C -0.10 0.25 4.20 -11.01 -0.05 0.21 16 7 H 0.15 -0.74 8.14 -2.39 -0.02 -0.76 16 8 C -0.11 0.17 6.80 31.12 0.21 0.38 16 9 C 0.12 -0.70 1.48 -10.28 -0.02 -0.72 16 10 O -0.54 3.93 13.40 -148.98 -2.00 1.94 16 11 C 0.11 -0.33 5.32 86.38 0.46 0.13 16 12 N -0.71 5.25 5.35 -463.06 -2.48 2.77 16 13 C 0.49 0.11 7.90 87.66 0.69 0.80 16 14 O -0.57 -7.39 16.42 -3.03 -0.05 -7.44 16 15 C 0.09 -0.43 6.48 85.63 0.55 0.13 16 16 N -0.47 -2.68 2.27 -520.00 -1.18 -3.86 16 17 C 0.05 0.42 9.89 83.00 0.82 1.25 16 18 C -0.18 -1.92 5.61 -18.63 -0.10 -2.03 16 19 C -0.05 -0.21 3.05 71.23 0.22 0.01 16 20 O -0.57 -2.13 12.86 -148.98 -1.92 -4.05 16 21 Si 0.78 0.22 30.79 68.60 2.11 2.33 16 22 C -0.12 -1.50 6.35 -20.20 -0.13 -1.63 16 23 C -0.08 -0.82 10.05 22.23 0.22 -0.60 16 24 C -0.15 -0.97 9.97 22.03 0.22 -0.75 16 25 C -0.10 -0.52 10.01 22.30 0.22 -0.29 16 26 C -0.14 -0.85 10.00 22.36 0.22 -0.62 16 27 C 0.09 0.89 6.80 39.03 0.27 1.15 16 28 C -0.13 0.94 7.01 31.11 0.22 1.16 16 29 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 30 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 31 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 32 H 0.07 0.10 8.13 -2.39 -0.02 0.08 16 33 H 0.07 0.12 8.13 -2.39 -0.02 0.10 16 34 H 0.10 0.14 7.39 -2.39 -0.02 0.12 16 35 H 0.09 -0.11 8.14 -2.39 -0.02 -0.13 16 36 H 0.39 -6.17 7.33 -74.06 -0.54 -6.72 16 37 H 0.07 0.01 7.94 -2.39 -0.02 -0.01 16 38 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 39 H 0.42 -6.86 7.03 -92.71 -0.65 -7.52 16 40 H 0.16 -1.98 8.12 -2.39 -0.02 -2.00 16 41 H 0.15 -1.71 8.14 -2.38 -0.02 -1.73 16 42 H 0.18 0.63 6.30 -2.91 -0.02 0.62 16 43 H 0.07 0.21 7.96 -2.38 -0.02 0.19 16 44 H 0.40 -2.94 8.74 -74.05 -0.65 -3.59 16 45 H -0.28 -1.14 7.04 99.48 0.70 -0.44 16 46 H -0.30 -2.36 7.11 99.48 0.71 -1.66 16 47 H 0.13 0.93 8.06 -2.91 -0.02 0.91 16 48 H 0.14 0.21 8.06 -2.91 -0.02 0.18 16 49 H 0.15 -0.11 8.06 -2.91 -0.02 -0.13 16 50 H 0.14 0.11 8.06 -2.91 -0.02 0.08 16 51 H 0.12 -1.32 8.14 -2.38 -0.02 -1.34 16 52 H 0.09 -0.51 7.91 -2.38 -0.02 -0.53 16 Total: 0.00 -37.30 438.36 -0.77 -38.07 By element: Atomic # 1 Polarization: -24.62 SS G_CDS: -0.84 Total: -25.46 kcal Atomic # 6 Polarization: -2.88 SS G_CDS: 5.76 Total: 2.88 kcal Atomic # 7 Polarization: 2.57 SS G_CDS: -3.66 Total: -1.09 kcal Atomic # 8 Polarization: -12.59 SS G_CDS: -4.14 Total: -16.73 kcal Atomic # 14 Polarization: 0.22 SS G_CDS: 2.11 Total: 2.33 kcal Total: -37.30 -0.77 -38.07 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_9818708.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.942 kcal (2) G-P(sol) polarization free energy of solvation -37.298 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.241 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.768 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.066 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.009 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds