Wall clock time and date at job start Sun Mar 7 2021 07:07:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45206 * 109.46777 * 2 1 4 4 C 1.34224 * 117.00077 * 179.97438 * 3 2 1 5 5 O 1.20833 * 120.00103 * 359.97438 * 4 3 2 6 6 C 1.50696 * 120.00302 * 180.02562 * 4 3 2 7 7 H 1.09004 * 112.85403 * 50.32645 * 6 4 3 8 8 C 1.53777 * 113.61736 * 181.52975 * 6 4 3 9 9 C 1.53781 * 87.08386 * 139.97799 * 8 6 4 10 10 O 1.42900 * 113.61478 * 89.20161 * 9 8 6 11 11 C 1.53004 * 113.61611 * 220.01877 * 9 8 6 12 12 N 1.46493 * 109.47506 * 179.97438 * 11 9 8 13 13 C 1.34771 * 120.00186 * 180.02562 * 12 11 9 14 14 O 1.21624 * 120.00244 * 359.97438 * 13 12 11 15 15 C 1.47266 * 120.00020 * 179.97438 * 13 12 11 16 16 C 1.36769 * 126.94463 * 179.97438 * 15 13 12 17 17 C 1.50699 * 125.80013 * 359.97438 * 16 15 13 18 18 N 1.34655 * 108.39947 * 180.02562 * 16 15 13 19 19 C 1.36452 * 110.29892 * 359.97438 * 18 16 15 20 20 C 1.50700 * 125.57162 * 179.97438 * 19 18 16 21 21 O 1.42903 * 109.46743 * 65.00608 * 20 19 18 22 22 Si 1.86303 * 109.46759 * 185.00326 * 20 19 18 23 23 C 1.34492 * 108.85194 * 359.71471 * 19 18 16 24 24 C 1.53790 * 113.61063 * 279.13608 * 6 4 3 25 25 H 1.09001 * 109.47362 * 60.00671 * 1 2 3 26 26 H 1.09002 * 109.46716 * 180.02562 * 1 2 3 27 27 H 1.09000 * 109.47486 * 299.99948 * 1 2 3 28 28 H 1.09000 * 109.47486 * 240.00051 * 2 1 3 29 29 H 1.09001 * 109.47362 * 119.99329 * 2 1 3 30 30 H 1.09002 * 113.61542 * 254.52757 * 8 6 4 31 31 H 1.09000 * 113.61623 * 25.34459 * 8 6 4 32 32 H 0.96701 * 113.99940 * 180.02562 * 10 9 8 33 33 H 1.09001 * 109.47196 * 300.00003 * 11 9 8 34 34 H 1.09003 * 109.46987 * 59.99231 * 11 9 8 35 35 H 0.97008 * 119.99895 * 359.97438 * 12 11 9 36 36 H 1.09001 * 109.46963 * 89.99751 * 17 16 15 37 37 H 1.09003 * 109.47457 * 209.99861 * 17 16 15 38 38 H 1.08998 * 109.47096 * 330.00127 * 17 16 15 39 39 H 0.97000 * 124.85096 * 179.97438 * 18 16 15 40 40 H 1.09000 * 109.47326 * 305.00085 * 20 19 18 41 41 H 0.96696 * 114.00139 * 59.99810 * 21 20 19 42 42 H 1.48492 * 110.00091 * 58.68368 * 22 20 19 43 43 H 1.48503 * 109.99602 * 180.02562 * 22 20 19 44 44 H 1.08000 * 126.82996 * 180.26744 * 23 19 18 45 45 H 1.08995 * 113.61221 * 334.55991 * 24 6 4 46 46 H 1.08992 * 113.61243 * 105.47010 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5450 0.0005 5 8 4.0807 0.5868 0.0015 6 6 3.9205 2.9376 0.0012 7 1 3.4895 3.5736 0.7743 8 6 5.4575 2.9685 -0.0359 9 6 5.3319 4.1532 -1.0084 10 8 5.2746 5.4242 -0.3579 11 6 6.3467 4.1168 -2.1530 12 7 6.1466 5.2804 -3.0202 13 6 6.9316 5.4581 -4.1012 14 8 7.8064 4.6527 -4.3565 15 6 6.7300 6.6275 -4.9733 16 6 7.4394 6.9459 -6.0985 17 6 8.5830 6.1509 -6.6739 18 7 6.9430 8.0910 -6.6040 19 6 5.9117 8.5413 -5.8323 20 6 5.1104 9.7927 -6.0834 21 8 4.3821 9.6548 -7.3051 22 14 3.9186 10.0595 -4.6765 23 6 5.7236 7.6828 -4.8143 24 6 3.9497 3.5927 -1.3899 25 1 -0.3634 0.5137 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 1.8934 -0.5138 -0.8900 29 1 1.8934 -0.5137 0.8900 30 1 5.9121 3.2336 0.9187 31 1 5.9016 2.0795 -0.4837 32 1 5.1952 6.1732 -0.9644 33 1 7.3568 4.1375 -1.7439 34 1 6.2081 3.2040 -2.7324 35 1 5.4485 5.9226 -2.8168 36 1 8.1961 5.4191 -7.3831 37 1 9.2720 6.8232 -7.1851 38 1 9.1079 5.6352 -5.8698 39 1 7.2717 8.5326 -7.4027 40 1 5.7837 10.6468 -6.1560 41 1 3.7621 8.9128 -7.3118 42 1 4.6616 10.1725 -3.3959 43 1 3.1218 11.2903 -4.9124 44 1 4.9813 7.7573 -4.0334 45 1 3.9807 2.8752 -2.2098 46 1 3.1887 4.3608 -1.5268 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_9865296.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:07:39 Heat of formation + Delta-G solvation = -133.467868 kcal Electronic energy + Delta-G solvation = -29492.363818 eV Core-core repulsion = 25157.373680 eV Total energy + Delta-G solvation = -4334.990138 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.161 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.54060 -42.02167 -40.69338 -39.65754 -37.86711 -37.59306 -35.98564 -35.25880 -32.95225 -32.69766 -32.30199 -29.74797 -28.94061 -27.07702 -26.47591 -25.35965 -23.88176 -23.01678 -21.87669 -21.51497 -20.88936 -20.78931 -19.26333 -18.75973 -18.05045 -17.65922 -17.34489 -17.32588 -16.93343 -16.66538 -16.57566 -16.17403 -16.01920 -15.47013 -15.36829 -15.03134 -14.91462 -14.79601 -14.58997 -14.23477 -14.15428 -14.06406 -13.89795 -13.82474 -13.56286 -13.44224 -13.21478 -13.00900 -12.93665 -12.74174 -12.58502 -12.31554 -12.23669 -12.13558 -11.70740 -11.49322 -11.38748 -10.95209 -10.81001 -10.77142 -10.16638 -9.92443 -9.22767 -5.16412 0.72727 1.05392 1.12308 1.20675 1.54065 1.66448 1.78061 2.00943 2.37010 2.56727 2.74885 3.08521 3.27156 3.34194 3.41706 3.45131 3.47790 3.79453 3.89901 3.96372 4.00186 4.02681 4.10256 4.14162 4.25381 4.30447 4.36941 4.40039 4.52042 4.56385 4.61817 4.65167 4.71369 4.73588 4.79078 4.81187 4.87961 4.90190 5.02643 5.05759 5.14223 5.37963 5.49925 5.60153 5.80537 6.30652 6.34745 6.35550 6.52972 6.78995 7.35758 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.505 6.505 6 C -0.103 4.103 7 H 0.132 0.868 8 C -0.101 4.101 9 C 0.098 3.902 10 O -0.531 6.531 11 C 0.106 3.894 12 N -0.730 5.730 13 C 0.596 3.404 14 O -0.542 6.542 15 C -0.238 4.238 16 C 0.123 3.877 17 C -0.100 4.100 18 N -0.535 5.535 19 C -0.012 4.012 20 C -0.052 4.052 21 O -0.544 6.544 22 Si 0.716 3.284 23 C -0.159 4.159 24 C -0.144 4.144 25 H 0.067 0.933 26 H 0.081 0.919 27 H 0.067 0.933 28 H 0.071 0.929 29 H 0.071 0.929 30 H 0.093 0.907 31 H 0.114 0.886 32 H 0.378 0.622 33 H 0.081 0.919 34 H 0.083 0.917 35 H 0.395 0.605 36 H 0.081 0.919 37 H 0.066 0.934 38 H 0.104 0.896 39 H 0.419 0.581 40 H 0.113 0.887 41 H 0.382 0.618 42 H -0.251 1.251 43 H -0.253 1.253 44 H 0.150 0.850 45 H 0.098 0.902 46 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.656 2.012 -1.257 5.226 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.392 6.392 6 C -0.122 4.122 7 H 0.150 0.850 8 C -0.138 4.138 9 C 0.056 3.944 10 O -0.337 6.337 11 C -0.018 4.018 12 N -0.383 5.383 13 C 0.386 3.614 14 O -0.421 6.421 15 C -0.247 4.247 16 C 0.003 3.997 17 C -0.157 4.157 18 N -0.131 5.131 19 C -0.122 4.122 20 C -0.162 4.162 21 O -0.349 6.349 22 Si 0.616 3.384 23 C -0.183 4.183 24 C -0.182 4.182 25 H 0.086 0.914 26 H 0.100 0.900 27 H 0.086 0.914 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.112 0.888 31 H 0.132 0.868 32 H 0.227 0.773 33 H 0.100 0.900 34 H 0.102 0.898 35 H 0.230 0.770 36 H 0.100 0.900 37 H 0.085 0.915 38 H 0.122 0.878 39 H 0.257 0.743 40 H 0.130 0.870 41 H 0.230 0.770 42 H -0.176 1.176 43 H -0.178 1.178 44 H 0.167 0.833 45 H 0.117 0.883 46 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -3.668 1.877 -0.510 4.152 hybrid contribution 0.281 0.806 -1.035 1.341 sum -3.388 2.682 -1.545 4.589 Atomic orbital electron populations 1.21820 0.92345 1.03242 1.03651 1.23088 0.95604 0.79910 1.02751 1.86518 1.24395 1.32688 1.83686 1.23549 0.80677 0.92335 0.72126 1.90689 1.60511 1.42942 1.45103 1.22426 0.97272 0.90896 1.01569 0.85041 1.23051 0.93263 0.96577 1.00951 1.22412 0.93849 0.85520 0.92627 1.86592 1.96190 1.14460 1.36424 1.21893 0.99884 0.89590 0.90388 1.45622 1.37534 1.27379 1.27782 1.17259 0.80493 0.84139 0.79522 1.90779 1.33277 1.45430 1.72597 1.19932 1.04111 1.00016 1.00657 1.20458 0.97124 0.87888 0.94198 1.20653 0.93710 0.98674 1.02672 1.41603 1.27207 1.20103 1.24165 1.20798 0.95303 1.00018 0.96083 1.24902 0.98688 0.94811 0.97818 1.86507 1.57861 1.54931 1.35617 0.94295 0.82502 0.86378 0.75228 1.21718 1.01430 0.95196 0.99992 1.23703 0.98296 1.00901 0.95302 0.91364 0.90039 0.91365 0.91108 0.91095 0.88803 0.86766 0.77344 0.90038 0.89840 0.76980 0.89996 0.91525 0.87794 0.74342 0.86959 0.76964 1.17554 1.17756 0.83290 0.88332 0.88977 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.26 10.29 37.16 0.38 0.64 16 2 C 0.06 0.02 6.19 37.16 0.23 0.25 16 3 O -0.36 -0.56 10.22 -39.24 -0.40 -0.96 16 4 C 0.47 0.88 7.48 36.00 0.27 1.15 16 5 O -0.51 -2.37 15.66 -18.76 -0.29 -2.67 16 6 C -0.10 0.08 4.19 -90.96 -0.38 -0.30 16 7 H 0.13 -0.21 8.14 -51.93 -0.42 -0.64 16 8 C -0.10 0.07 6.79 -25.92 -0.18 -0.10 16 9 C 0.10 -0.19 1.49 -89.71 -0.13 -0.32 16 10 O -0.53 0.95 13.41 -35.23 -0.47 0.48 16 11 C 0.11 -0.09 5.33 -4.04 -0.02 -0.11 16 12 N -0.73 0.89 5.33 -61.44 -0.33 0.56 16 13 C 0.60 1.22 7.81 -12.59 -0.10 1.12 16 14 O -0.54 -2.95 14.81 5.26 0.08 -2.87 16 15 C -0.24 -0.22 6.29 -103.35 -0.65 -0.87 16 16 C 0.12 0.07 7.17 -81.89 -0.59 -0.52 16 17 C -0.10 0.02 9.88 36.01 0.36 0.37 16 18 N -0.54 0.55 5.90 -5.42 -0.03 0.52 16 19 C -0.01 0.02 6.47 -81.86 -0.53 -0.51 16 20 C -0.05 0.11 3.08 36.01 0.11 0.22 16 21 O -0.54 0.85 12.88 -35.23 -0.45 0.40 16 22 Si 0.72 -2.29 30.58 -169.99 -5.20 -7.49 16 23 C -0.16 0.24 9.03 -37.50 -0.34 -0.10 16 24 C -0.14 0.35 7.03 -25.82 -0.18 0.17 16 25 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 26 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 27 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 28 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 29 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 30 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.11 -0.01 7.41 -51.93 -0.38 -0.40 16 32 H 0.38 -1.89 7.30 45.56 0.33 -1.56 16 33 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.08 -0.01 7.95 -51.93 -0.41 -0.43 16 35 H 0.40 -1.64 6.16 -40.82 -0.25 -1.89 16 36 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 37 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.10 0.18 6.47 -51.93 -0.34 -0.15 16 39 H 0.42 -1.16 8.96 -40.82 -0.37 -1.53 16 40 H 0.11 -0.20 7.96 -51.93 -0.41 -0.61 16 41 H 0.38 -1.96 8.70 45.56 0.40 -1.57 16 42 H -0.25 0.26 7.11 56.52 0.40 0.66 16 43 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 44 H 0.15 -0.69 5.88 -52.49 -0.31 -0.99 16 45 H 0.10 -0.21 7.92 -51.93 -0.41 -0.62 16 46 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 LS Contribution 385.79 15.07 5.81 5.81 Total: 0.00 -10.64 385.79 -9.04 -19.67 By element: Atomic # 1 Polarization: -8.56 SS G_CDS: -6.00 Total: -14.56 kcal Atomic # 6 Polarization: 2.85 SS G_CDS: -1.75 Total: 1.10 kcal Atomic # 7 Polarization: 1.44 SS G_CDS: -0.36 Total: 1.08 kcal Atomic # 8 Polarization: -4.08 SS G_CDS: -1.54 Total: -5.62 kcal Atomic # 14 Polarization: -2.29 SS G_CDS: -5.20 Total: -7.49 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -10.64 -9.04 -19.67 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_9865296.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.794 kcal (2) G-P(sol) polarization free energy of solvation -10.635 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.039 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.674 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.468 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds