Wall clock time and date at job start Sun Mar 7 2021 05:12:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42906 * 113.99743 * 2 1 4 4 H 1.09004 * 112.90922 * 18.75708 * 3 2 1 5 5 C 1.53784 * 113.61258 * 149.99751 * 3 2 1 6 6 C 1.53783 * 87.07611 * 139.98546 * 5 3 2 7 7 H 1.09000 * 113.61626 * 89.20802 * 6 5 3 8 8 C 1.53008 * 113.61240 * 220.02096 * 6 5 3 9 9 C 1.53001 * 109.46875 * 183.47350 * 8 6 5 10 10 N 1.46502 * 109.46611 * 180.02562 * 9 8 6 11 11 C 1.34778 * 119.99859 * 180.02562 * 10 9 8 12 12 O 1.21286 * 119.99784 * 359.97438 * 11 10 9 13 13 C 1.50702 * 120.00453 * 179.97438 * 11 10 9 14 14 C 1.53003 * 109.47140 * 64.99473 * 13 11 10 15 15 O 1.42894 * 109.47496 * 184.99947 * 13 11 10 16 16 C 1.35895 * 117.00191 * 155.08372 * 15 13 11 17 17 C 1.38729 * 120.05698 * 5.47269 * 16 15 13 18 18 C 1.38148 * 119.94951 * 180.29716 * 17 16 15 19 19 C 1.38270 * 120.05019 * 359.46981 * 18 17 16 20 20 C 1.50697 * 119.94416 * 180.25694 * 19 18 17 21 21 O 1.42906 * 109.47049 * 245.25488 * 20 19 18 22 22 Si 1.86302 * 109.47077 * 5.25290 * 20 19 18 23 23 C 1.38264 * 120.11236 * 0.50836 * 19 18 17 24 24 C 1.38155 * 120.05514 * 359.76690 * 23 19 18 25 25 C 1.53777 * 87.17393 * 334.61009 * 6 5 3 26 26 H 1.09004 * 109.46884 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.47278 * 299.99661 * 1 2 3 28 28 H 1.09001 * 109.47664 * 59.99662 * 1 2 3 29 29 H 1.08995 * 113.61406 * 25.44184 * 5 3 2 30 30 H 1.09000 * 113.69450 * 254.53965 * 5 3 2 31 31 H 1.08998 * 109.47297 * 63.47156 * 8 6 5 32 32 H 1.09001 * 109.46765 * 303.47314 * 8 6 5 33 33 H 1.08998 * 109.47317 * 59.99818 * 9 8 6 34 34 H 1.09003 * 109.46909 * 299.99769 * 9 8 6 35 35 H 0.97001 * 120.00661 * 359.97438 * 10 9 8 36 36 H 1.09004 * 109.46474 * 305.00064 * 13 11 10 37 37 H 1.08991 * 109.46872 * 180.02562 * 14 13 11 38 38 H 1.09002 * 109.47242 * 300.00657 * 14 13 11 39 39 H 1.09001 * 109.46584 * 60.00231 * 14 13 11 40 40 H 1.08008 * 120.02497 * 0.02562 * 17 16 15 41 41 H 1.07995 * 119.97361 * 179.69912 * 18 17 16 42 42 H 1.08995 * 109.47476 * 125.25174 * 20 19 18 43 43 H 0.96700 * 113.99577 * 59.99578 * 21 20 19 44 44 H 1.48499 * 110.00222 * 58.68202 * 22 20 19 45 45 H 1.48498 * 110.00202 * 180.02562 * 22 20 19 46 46 H 1.07995 * 119.97458 * 179.74617 * 23 19 18 47 47 H 1.08004 * 120.02574 * 179.97438 * 24 23 19 48 48 H 1.09005 * 113.61154 * 139.94293 * 25 6 5 49 49 H 1.09000 * 113.61693 * 270.83894 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3142 2.0798 0.3229 5 6 3.3755 1.3720 0.7046 6 6 3.8225 2.3183 -0.4221 7 1 3.6234 3.3696 -0.2141 8 6 5.2542 2.0683 -0.9006 9 6 5.6290 3.1115 -1.9552 10 7 6.9995 2.8716 -2.4137 11 6 7.5474 3.6733 -3.3484 12 8 6.9056 4.5931 -3.8102 13 6 8.9575 3.4271 -3.8198 14 6 9.0259 2.0797 -4.5416 15 8 9.3487 4.4684 -4.7167 16 6 10.6799 4.7161 -4.8314 17 6 11.5968 3.9001 -4.1848 18 6 12.9493 4.1576 -4.2980 19 6 13.3900 5.2211 -5.0638 20 6 14.8662 5.4964 -5.1903 21 8 15.1703 6.7531 -4.5817 22 14 15.8250 4.1455 -4.3379 23 6 12.4783 6.0357 -5.7097 24 6 11.1244 5.7857 -5.5950 25 6 2.7532 1.6513 -1.3032 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 -0.3634 0.5139 -0.8899 29 1 3.9088 0.4215 0.7137 30 1 3.3397 1.8468 1.6851 31 1 5.3230 1.0711 -1.3355 32 1 5.9382 2.1440 -0.0554 33 1 5.5601 4.1087 -1.5203 34 1 4.9449 3.0357 -2.8004 35 1 7.5130 2.1363 -2.0442 36 1 9.6302 3.4143 -2.9622 37 1 10.0458 1.9015 -4.8822 38 1 8.7275 1.2854 -3.8575 39 1 8.3531 2.0925 -5.3992 40 1 11.2532 3.0667 -3.5898 41 1 13.6632 3.5255 -3.7908 42 1 15.1411 5.5273 -6.2446 43 1 14.9512 6.7977 -3.6409 44 1 15.4935 2.8294 -4.9406 45 1 17.2824 4.4055 -4.4549 46 1 12.8248 6.8682 -6.3039 47 1 10.4126 6.4225 -6.0993 48 1 2.2144 2.3516 -1.9415 49 1 3.1161 0.7772 -1.8440 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16488024_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:12:25 Heat of formation + Delta-G solvation = -98.316990 kcal Electronic energy + Delta-G solvation = -28051.272758 eV Core-core repulsion = 23946.377360 eV Total energy + Delta-G solvation = -4104.895397 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.76357 -40.79285 -40.38073 -39.04239 -37.58947 -37.14177 -35.97547 -33.67951 -32.08568 -31.70480 -31.17363 -27.81956 -26.88521 -26.73629 -26.06208 -24.89979 -23.94445 -22.73721 -22.38302 -21.39806 -20.58068 -19.53910 -18.67975 -18.10148 -17.66892 -17.11533 -17.00051 -16.80980 -16.60916 -16.43306 -16.20731 -16.04559 -15.81835 -15.67227 -15.48551 -15.12772 -14.70792 -14.64449 -14.42151 -14.09279 -13.79874 -13.75908 -13.58358 -13.47633 -13.43839 -13.40169 -13.09673 -12.92904 -12.52948 -12.38648 -12.22310 -12.07802 -12.01765 -11.85632 -11.72886 -11.60886 -11.37704 -10.79943 -10.45372 -10.41145 -10.20592 -10.04486 -9.20505 -5.06178 0.28608 0.29253 1.29111 1.46956 1.49279 1.61458 1.96448 2.45400 2.65736 2.81687 3.34892 3.37845 3.48678 3.50082 3.54880 3.66505 3.70162 3.70701 3.76639 3.81882 3.86497 3.95277 4.13816 4.16297 4.20848 4.28064 4.34955 4.40661 4.43206 4.47765 4.48574 4.51448 4.53830 4.65575 4.72548 4.73559 4.75817 4.84089 4.86976 4.90318 4.94947 4.99211 5.14034 5.16290 5.24979 5.27015 5.30721 5.50350 5.68521 6.22291 6.24353 6.37828 6.58649 7.08270 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.378 6.378 3 C 0.058 3.942 4 H 0.087 0.913 5 C -0.131 4.131 6 C -0.107 4.107 7 H 0.097 0.903 8 C -0.118 4.118 9 C 0.120 3.880 10 N -0.727 5.727 11 C 0.517 3.483 12 O -0.512 6.512 13 C 0.066 3.934 14 C -0.178 4.178 15 O -0.284 6.284 16 C 0.136 3.864 17 C -0.208 4.208 18 C -0.074 4.074 19 C -0.158 4.158 20 C -0.063 4.063 21 O -0.541 6.541 22 Si 0.684 3.316 23 C -0.050 4.050 24 C -0.146 4.146 25 C -0.153 4.153 26 H 0.086 0.914 27 H 0.042 0.958 28 H 0.042 0.958 29 H 0.092 0.908 30 H 0.074 0.926 31 H 0.074 0.926 32 H 0.074 0.926 33 H 0.070 0.930 34 H 0.071 0.929 35 H 0.402 0.598 36 H 0.101 0.899 37 H 0.078 0.922 38 H 0.080 0.920 39 H 0.077 0.923 40 H 0.133 0.867 41 H 0.130 0.870 42 H 0.112 0.888 43 H 0.379 0.621 44 H -0.258 1.258 45 H -0.255 1.255 46 H 0.134 0.866 47 H 0.135 0.865 48 H 0.070 0.930 49 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.704 -3.917 5.375 6.688 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.297 6.297 3 C 0.000 4.000 4 H 0.105 0.895 5 C -0.169 4.169 6 C -0.126 4.126 7 H 0.115 0.885 8 C -0.156 4.156 9 C -0.003 4.003 10 N -0.381 5.381 11 C 0.302 3.698 12 O -0.385 6.385 13 C 0.006 3.994 14 C -0.235 4.235 15 O -0.196 6.196 16 C 0.090 3.910 17 C -0.227 4.227 18 C -0.092 4.092 19 C -0.159 4.159 20 C -0.174 4.174 21 O -0.346 6.346 22 Si 0.586 3.414 23 C -0.069 4.069 24 C -0.165 4.165 25 C -0.190 4.190 26 H 0.104 0.896 27 H 0.061 0.939 28 H 0.061 0.939 29 H 0.111 0.889 30 H 0.092 0.908 31 H 0.092 0.908 32 H 0.093 0.907 33 H 0.089 0.911 34 H 0.089 0.911 35 H 0.236 0.764 36 H 0.119 0.881 37 H 0.097 0.903 38 H 0.099 0.901 39 H 0.096 0.904 40 H 0.151 0.849 41 H 0.147 0.853 42 H 0.130 0.870 43 H 0.226 0.774 44 H -0.183 1.183 45 H -0.180 1.180 46 H 0.152 0.848 47 H 0.153 0.847 48 H 0.089 0.911 49 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -0.454 -3.813 4.234 5.716 hybrid contribution -0.270 -0.117 -0.247 0.384 sum -0.724 -3.930 3.987 5.645 Atomic orbital electron populations 1.22811 0.80976 1.02962 1.00020 1.87947 1.19830 1.27320 1.94583 1.23755 0.93958 0.85398 0.96853 0.89464 1.23274 0.95406 1.00247 0.97938 1.22231 0.93595 0.99674 0.97097 0.88509 1.21743 0.96536 0.99066 0.98265 1.21424 0.81752 0.99446 0.97647 1.45866 1.16364 1.33627 1.42287 1.20076 0.87806 0.82462 0.79503 1.90783 1.62578 1.29917 1.55272 1.22197 0.94708 0.88482 0.93986 1.22359 1.04702 0.94155 1.02305 1.86231 1.20569 1.52621 1.60175 1.19085 0.82175 0.94280 0.95443 1.21210 0.93519 1.02475 1.05493 1.20760 0.94994 0.96295 0.97108 1.20243 0.96338 0.97818 1.01459 1.24977 0.94804 0.95146 1.02486 1.86509 1.86439 1.33405 1.28272 0.94878 0.79494 0.76518 0.90514 1.20861 0.91246 0.97985 0.96765 1.20549 0.96105 0.97682 1.02140 1.23647 0.97370 1.00934 0.97097 0.89563 0.93939 0.93946 0.88929 0.90758 0.90758 0.90735 0.91117 0.91050 0.76391 0.88148 0.90273 0.90145 0.90440 0.84891 0.85314 0.87021 0.77416 1.18305 1.17975 0.84837 0.84672 0.91076 0.89024 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.61 10.72 -35.23 -0.38 -0.99 16 3 C 0.06 -0.03 4.31 -25.83 -0.11 -0.14 16 4 H 0.09 -0.13 7.87 -51.93 -0.41 -0.54 16 5 C -0.13 0.21 7.48 -25.92 -0.19 0.02 16 6 C -0.11 0.26 3.64 -89.80 -0.33 -0.07 16 7 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 8 C -0.12 0.39 5.15 -26.73 -0.14 0.25 16 9 C 0.12 -0.17 5.67 -4.04 -0.02 -0.19 16 10 N -0.73 1.28 5.52 -60.29 -0.33 0.95 16 11 C 0.52 0.86 7.18 -10.98 -0.08 0.78 16 12 O -0.51 -3.44 16.51 -14.31 -0.24 -3.67 16 13 C 0.07 -0.02 2.63 -27.88 -0.07 -0.10 16 14 C -0.18 0.42 9.12 37.16 0.34 0.76 16 15 O -0.28 -0.86 9.34 -39.27 -0.37 -1.23 16 16 C 0.14 0.25 6.60 -39.22 -0.26 -0.01 16 17 C -0.21 0.07 8.24 -39.43 -0.32 -0.25 16 18 C -0.07 0.05 8.66 -39.60 -0.34 -0.29 16 19 C -0.16 -0.05 5.35 -104.60 -0.56 -0.61 16 20 C -0.06 0.01 2.80 36.00 0.10 0.11 16 21 O -0.54 -0.23 12.83 -35.23 -0.45 -0.68 16 22 Si 0.68 -0.78 29.80 -169.99 -5.07 -5.85 16 23 C -0.05 -0.05 9.68 -39.60 -0.38 -0.44 16 24 C -0.15 -0.28 9.99 -39.43 -0.39 -0.67 16 25 C -0.15 0.19 7.48 -25.83 -0.19 0.00 16 26 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 27 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 28 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 29 H 0.09 -0.11 8.10 -51.93 -0.42 -0.53 16 30 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 31 H 0.07 -0.26 7.87 -51.93 -0.41 -0.67 16 32 H 0.07 -0.29 8.14 -51.93 -0.42 -0.72 16 33 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 35 H 0.40 -1.99 8.26 -40.82 -0.34 -2.32 16 36 H 0.10 -0.30 6.32 -51.93 -0.33 -0.63 16 37 H 0.08 -0.21 6.90 -51.93 -0.36 -0.57 16 38 H 0.08 -0.39 7.93 -51.93 -0.41 -0.80 16 39 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.13 -0.39 5.43 -52.48 -0.28 -0.67 16 41 H 0.13 -0.38 4.91 -52.49 -0.26 -0.64 16 42 H 0.11 0.04 7.96 -51.93 -0.41 -0.38 16 43 H 0.38 -1.29 8.70 45.56 0.40 -0.89 16 44 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 45 H -0.25 -0.57 7.11 56.52 0.40 -0.16 16 46 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 47 H 0.14 0.21 8.06 -52.48 -0.42 -0.21 16 48 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 49 H 0.09 -0.06 7.92 -51.93 -0.41 -0.47 16 LS Contribution 399.44 15.07 6.02 6.02 Total: 0.00 -9.75 399.44 -10.59 -20.34 By element: Atomic # 1 Polarization: -7.20 SS G_CDS: -7.91 Total: -15.11 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -1.87 Total: 0.22 kcal Atomic # 7 Polarization: 1.28 SS G_CDS: -0.33 Total: 0.95 kcal Atomic # 8 Polarization: -5.14 SS G_CDS: -1.43 Total: -6.57 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.07 Total: -5.85 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -9.75 -10.59 -20.34 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16488024_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.980 kcal (2) G-P(sol) polarization free energy of solvation -9.746 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.726 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.591 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.337 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.317 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds