Wall clock time and date at job start Sun Mar 7 2021 05:12:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42905 * 113.99778 * 2 1 4 4 H 1.08997 * 112.84647 * 20.33846 * 3 2 1 5 5 C 1.53781 * 113.61225 * 151.53125 * 3 2 1 6 6 C 1.53776 * 87.07929 * 139.98120 * 5 3 2 7 7 H 1.09008 * 113.61247 * 89.12053 * 6 5 3 8 8 C 1.53008 * 113.61404 * 219.93191 * 6 5 3 9 9 C 1.52998 * 109.47186 * 185.00104 * 8 6 5 10 10 N 1.46500 * 109.47205 * 180.02562 * 9 8 6 11 11 C 1.34769 * 119.99816 * 180.02562 * 10 9 8 12 12 O 1.21694 * 120.00246 * 359.97438 * 11 10 9 13 13 C 1.46684 * 119.99645 * 180.02562 * 11 10 9 14 14 C 1.37871 * 126.22848 * 179.71375 * 13 11 10 15 15 C 1.39840 * 107.08253 * 179.84782 * 14 13 11 16 16 C 1.50698 * 126.06909 * 180.13972 * 15 14 13 17 17 O 1.42896 * 109.47605 * 65.30220 * 16 15 14 18 18 Si 1.86307 * 109.47313 * 185.30632 * 16 15 14 19 19 C 1.35451 * 107.86471 * 0.41820 * 15 14 13 20 20 N 1.35536 * 108.86863 * 359.73929 * 19 15 14 21 21 C 1.53781 * 113.61516 * 249.13657 * 3 2 1 22 22 H 1.08997 * 109.47442 * 59.99964 * 1 2 3 23 23 H 1.08999 * 109.46926 * 179.97438 * 1 2 3 24 24 H 1.08997 * 109.47171 * 299.99768 * 1 2 3 25 25 H 1.08998 * 113.61583 * 254.53131 * 5 3 2 26 26 H 1.08999 * 113.61636 * 25.43307 * 5 3 2 27 27 H 1.08994 * 109.46961 * 305.00239 * 8 6 5 28 28 H 1.08997 * 109.47103 * 65.00208 * 8 6 5 29 29 H 1.09000 * 109.47217 * 300.00396 * 9 8 6 30 30 H 1.09005 * 109.47276 * 60.00238 * 9 8 6 31 31 H 0.97000 * 119.99837 * 359.97438 * 10 9 8 32 32 H 1.07993 * 126.46340 * 359.96327 * 14 13 11 33 33 H 1.09003 * 109.47117 * 305.30110 * 16 15 14 34 34 H 0.96707 * 113.99661 * 59.99626 * 17 16 15 35 35 H 1.48499 * 110.00161 * 180.02562 * 18 16 15 36 36 H 1.48502 * 109.99545 * 301.31762 * 18 16 15 37 37 H 1.07997 * 125.56765 * 179.70065 * 19 15 14 38 38 H 0.97003 * 125.67571 * 179.97438 * 20 19 15 39 39 H 1.08999 * 113.61449 * 334.57015 * 21 3 2 40 40 H 1.09003 * 113.60980 * 105.47166 * 21 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3219 2.0752 0.3491 5 6 3.3923 1.3645 0.6717 6 6 3.8119 2.3230 -0.4553 7 1 3.6167 3.3718 -0.2316 8 6 5.2322 2.0796 -0.9698 9 6 5.5951 3.1567 -1.9940 10 7 6.9548 2.9233 -2.4871 11 6 7.4910 3.7535 -3.4033 12 8 6.8456 4.6967 -3.8214 13 6 8.8521 3.5195 -3.8975 14 6 9.5214 4.2798 -4.8328 15 6 10.7844 3.7039 -5.0027 16 6 11.8673 4.1972 -5.9273 17 8 12.3182 5.4810 -5.4909 18 14 13.2935 2.9986 -5.9085 19 6 10.8593 2.6205 -4.1932 20 7 9.6916 2.4975 -3.5163 21 6 2.7192 1.6642 -1.3166 22 1 -0.3634 0.5138 -0.8899 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 3.3792 1.8289 1.6577 26 1 3.9256 0.4139 0.6576 27 1 5.9327 2.1205 -0.1358 28 1 5.2848 1.0980 -1.4407 29 1 4.8945 3.1158 -2.8280 30 1 5.5426 4.1384 -1.5231 31 1 7.4693 2.1717 -2.1536 32 1 9.1426 5.1561 -5.3376 33 1 11.4722 4.2758 -6.9402 34 1 12.6833 5.4861 -4.5955 35 1 14.3685 3.4740 -6.8161 36 1 13.8207 2.8583 -4.5273 37 1 11.7103 1.9618 -4.1025 38 1 9.4822 1.8043 -2.8708 39 1 3.0680 0.7958 -1.8754 40 1 2.1633 2.3704 -1.9335 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16488024_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:12:28 Heat of formation + Delta-G solvation = -45.820714 kcal Electronic energy + Delta-G solvation = -21145.173600 eV Core-core repulsion = 17735.112271 eV Total energy + Delta-G solvation = -3410.061328 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.47907 -40.74492 -40.04604 -37.74384 -37.57775 -35.98399 -32.82620 -31.88625 -30.50526 -27.83219 -26.89323 -26.63227 -25.59939 -23.61523 -22.71073 -21.22169 -20.86424 -20.53755 -19.98085 -17.74200 -17.59563 -17.07954 -16.87873 -16.83684 -16.45000 -16.23367 -15.98159 -15.70999 -15.53617 -15.12349 -14.75867 -14.42105 -14.38334 -13.82549 -13.75972 -13.50318 -13.48588 -13.42025 -13.09866 -12.52055 -12.40360 -12.38946 -11.86251 -11.79912 -11.65794 -11.38814 -11.09538 -10.47116 -10.45782 -10.23264 -9.97496 -9.31528 -4.95043 0.41485 1.32834 1.53634 1.59596 1.91640 2.01619 2.05265 2.39028 2.80991 3.34115 3.48716 3.52143 3.69496 3.72963 3.76248 3.87673 3.96204 4.03074 4.13759 4.15973 4.34462 4.35753 4.42979 4.47168 4.53153 4.71977 4.72835 4.73654 4.75467 4.83809 4.87314 4.92694 4.99161 5.05673 5.13196 5.26765 5.30084 5.58909 5.79472 6.19335 6.23807 6.40582 6.55275 7.12884 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.379 6.379 3 C 0.059 3.941 4 H 0.087 0.913 5 C -0.131 4.131 6 C -0.107 4.107 7 H 0.097 0.903 8 C -0.118 4.118 9 C 0.120 3.880 10 N -0.734 5.734 11 C 0.589 3.411 12 O -0.524 6.524 13 C -0.058 4.058 14 C -0.075 4.075 15 C -0.209 4.209 16 C -0.040 4.040 17 O -0.530 6.530 18 Si 0.684 3.316 19 C 0.035 3.965 20 N -0.535 5.535 21 C -0.153 4.153 22 H 0.042 0.958 23 H 0.086 0.914 24 H 0.042 0.958 25 H 0.074 0.926 26 H 0.092 0.908 27 H 0.073 0.927 28 H 0.073 0.927 29 H 0.072 0.928 30 H 0.071 0.929 31 H 0.394 0.606 32 H 0.150 0.850 33 H 0.115 0.885 34 H 0.374 0.626 35 H -0.258 1.258 36 H -0.261 1.261 37 H 0.176 0.824 38 H 0.418 0.582 39 H 0.091 0.909 40 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.170 -5.655 3.120 6.461 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.297 6.297 3 C 0.001 3.999 4 H 0.105 0.895 5 C -0.168 4.168 6 C -0.126 4.126 7 H 0.115 0.885 8 C -0.156 4.156 9 C -0.003 4.003 10 N -0.385 5.385 11 C 0.376 3.624 12 O -0.399 6.399 13 C -0.170 4.170 14 C -0.102 4.102 15 C -0.216 4.216 16 C -0.151 4.151 17 O -0.336 6.336 18 Si 0.585 3.415 19 C -0.102 4.102 20 N -0.131 5.131 21 C -0.191 4.191 22 H 0.061 0.939 23 H 0.104 0.896 24 H 0.061 0.939 25 H 0.092 0.908 26 H 0.110 0.890 27 H 0.091 0.909 28 H 0.091 0.909 29 H 0.091 0.909 30 H 0.089 0.911 31 H 0.227 0.773 32 H 0.168 0.832 33 H 0.133 0.867 34 H 0.221 0.779 35 H -0.183 1.183 36 H -0.186 1.186 37 H 0.193 0.807 38 H 0.255 0.745 39 H 0.110 0.890 40 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -0.006 -5.168 2.515 5.748 hybrid contribution -0.023 0.369 1.334 1.384 sum -0.029 -4.799 3.849 6.152 Atomic orbital electron populations 1.22806 0.80966 1.02960 1.00030 1.87946 1.19841 1.27329 1.94601 1.23721 0.93973 0.85393 0.96845 0.89470 1.23264 0.95337 1.00171 0.98053 1.22259 0.93588 0.99668 0.97059 0.88479 1.21741 0.96700 0.98822 0.98363 1.21421 0.82174 0.99250 0.97452 1.45889 1.17355 1.31222 1.44082 1.17048 0.84224 0.82307 0.78773 1.90884 1.61160 1.29889 1.57996 1.20424 0.93199 0.96217 1.07208 1.21235 0.92639 0.99483 0.96805 1.19841 0.97753 0.99356 1.04604 1.24335 1.00797 0.90941 0.99042 1.86613 1.81789 1.28871 1.36360 0.95389 0.78271 0.86376 0.81477 1.21896 0.90289 1.00714 0.97282 1.41925 1.12707 1.23805 1.34711 1.23654 0.97350 1.00935 0.97130 0.93941 0.89562 0.93936 0.90757 0.88960 0.90884 0.90853 0.90948 0.91065 0.77270 0.83180 0.86676 0.77876 1.18310 1.18577 0.80745 0.74452 0.89037 0.91037 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.64 10.71 -35.23 -0.38 -1.02 16 3 C 0.06 -0.02 4.30 -25.92 -0.11 -0.13 16 4 H 0.09 -0.12 7.88 -51.93 -0.41 -0.53 16 5 C -0.13 0.19 7.47 -25.92 -0.19 -0.01 16 6 C -0.11 0.24 3.65 -89.72 -0.33 -0.09 16 7 H 0.10 -0.24 8.13 -51.92 -0.42 -0.66 16 8 C -0.12 0.35 5.17 -26.73 -0.14 0.21 16 9 C 0.12 -0.11 5.66 -4.04 -0.02 -0.14 16 10 N -0.73 0.72 5.55 -61.62 -0.34 0.38 16 11 C 0.59 1.52 7.79 -12.85 -0.10 1.42 16 12 O -0.52 -3.59 16.88 5.19 0.09 -3.50 16 13 C -0.06 -0.07 7.06 -81.98 -0.58 -0.65 16 14 C -0.08 -0.18 10.59 -39.12 -0.41 -0.59 16 15 C -0.21 -0.06 5.43 -105.02 -0.57 -0.63 16 16 C -0.04 0.00 3.02 36.00 0.11 0.11 16 17 O -0.53 -1.05 12.88 -35.23 -0.45 -1.51 16 18 Si 0.68 -1.08 30.60 -169.99 -5.20 -6.28 16 19 C 0.03 -0.07 10.45 -16.91 -0.18 -0.25 16 20 N -0.54 1.27 5.99 -9.39 -0.06 1.22 16 21 C -0.15 0.17 7.48 -25.83 -0.19 -0.02 16 22 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 23 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 24 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 25 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 26 H 0.09 -0.09 8.10 -51.93 -0.42 -0.51 16 27 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 28 H 0.07 -0.23 7.86 -51.93 -0.41 -0.64 16 29 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 31 H 0.39 -1.62 7.60 -40.82 -0.31 -1.93 16 32 H 0.15 0.51 8.06 -52.49 -0.42 0.09 16 33 H 0.12 -0.02 7.96 -51.93 -0.41 -0.43 16 34 H 0.37 -0.37 8.70 45.56 0.40 0.03 16 35 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 36 H -0.26 0.03 7.11 56.52 0.40 0.43 16 37 H 0.18 -0.85 6.21 -52.49 -0.33 -1.18 16 38 H 0.42 -2.42 8.19 -40.82 -0.33 -2.76 16 39 H 0.09 -0.05 7.91 -51.93 -0.41 -0.46 16 40 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 LS Contribution 337.48 15.07 5.09 5.09 Total: 0.00 -9.19 337.48 -8.94 -18.13 By element: Atomic # 1 Polarization: -6.74 SS G_CDS: -6.06 Total: -12.81 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: -1.62 Total: 0.31 kcal Atomic # 7 Polarization: 1.99 SS G_CDS: -0.40 Total: 1.59 kcal Atomic # 8 Polarization: -5.29 SS G_CDS: -0.74 Total: -6.03 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.20 Total: -6.28 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -9.19 -8.94 -18.13 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16488024_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.693 kcal (2) G-P(sol) polarization free energy of solvation -9.188 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.881 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.128 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.821 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds