Wall clock time and date at job start Sun Mar 7 2021 05:12:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42897 * 113.99803 * 2 1 4 4 H 1.09000 * 112.85304 * 18.79869 * 3 2 1 5 5 C 1.53780 * 113.61175 * 149.99829 * 3 2 1 6 6 C 1.53783 * 87.08108 * 140.06065 * 5 3 2 7 7 H 1.09007 * 113.61480 * 89.19826 * 6 5 3 8 8 C 1.52994 * 113.61695 * 220.01433 * 6 5 3 9 9 C 1.53006 * 109.47336 * 183.46915 * 8 6 5 10 10 N 1.46500 * 109.46916 * 179.97438 * 9 8 6 11 11 C 1.34776 * 119.99510 * 180.02562 * 10 9 8 12 12 O 1.21693 * 120.00537 * 5.06298 * 11 10 9 13 13 C 1.46686 * 119.99903 * 184.79257 * 11 10 9 14 14 C 1.37870 * 126.22949 * 354.90580 * 13 11 10 15 15 C 1.39834 * 107.08410 * 179.97438 * 14 13 11 16 16 C 1.35454 * 107.86489 * 0.02562 * 15 14 13 17 17 C 1.50699 * 125.56676 * 179.97438 * 16 15 14 18 18 O 1.42897 * 109.47374 * 150.02230 * 17 16 15 19 19 Si 1.86300 * 109.46961 * 30.02363 * 17 16 15 20 20 N 1.35536 * 108.87235 * 359.76768 * 16 15 14 21 21 C 1.46500 * 125.68319 * 180.23227 * 20 16 15 22 22 C 1.53777 * 87.17358 * 334.60992 * 6 5 3 23 23 H 1.08997 * 109.47410 * 179.97438 * 1 2 3 24 24 H 1.09000 * 109.47374 * 300.00177 * 1 2 3 25 25 H 1.09007 * 109.46993 * 60.00490 * 1 2 3 26 26 H 1.09000 * 113.61556 * 25.51438 * 5 3 2 27 27 H 1.09003 * 113.61631 * 254.61181 * 5 3 2 28 28 H 1.09004 * 109.46673 * 63.47505 * 8 6 5 29 29 H 1.09000 * 109.47592 * 303.47752 * 8 6 5 30 30 H 1.09004 * 109.46758 * 60.00641 * 9 8 6 31 31 H 1.08994 * 109.47205 * 300.00525 * 9 8 6 32 32 H 0.97002 * 120.00378 * 0.02562 * 10 9 8 33 33 H 1.08004 * 126.46114 * 0.02562 * 14 13 11 34 34 H 1.08001 * 126.06786 * 179.97438 * 15 14 13 35 35 H 1.08998 * 109.46962 * 270.02424 * 17 16 15 36 36 H 0.96696 * 114.00413 * 300.00257 * 18 17 16 37 37 H 1.48502 * 110.00176 * 58.68119 * 19 17 16 38 38 H 1.48507 * 109.99794 * 180.02562 * 19 17 16 39 39 H 1.08997 * 109.46941 * 276.02169 * 21 20 16 40 40 H 1.09005 * 109.46683 * 36.01482 * 21 20 16 41 41 H 1.08991 * 109.47188 * 156.01886 * 21 20 16 42 42 H 1.09001 * 113.61712 * 139.94005 * 22 6 5 43 43 H 1.08999 * 113.61501 * 270.83847 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0789 0.3237 5 6 3.3755 1.3719 0.7046 6 6 3.8220 2.3198 -0.4210 7 1 3.6222 3.3708 -0.2118 8 6 5.2537 2.0713 -0.8998 9 6 5.6279 3.1160 -1.9531 10 7 6.9991 2.8783 -2.4110 11 6 7.5464 3.6815 -3.3446 12 8 6.9373 4.6580 -3.7401 13 6 8.8790 3.3821 -3.8798 14 6 9.7216 2.3777 -3.4532 15 6 10.8791 2.4532 -4.2340 16 6 10.7270 3.4800 -5.1043 17 6 11.7394 3.9149 -6.1325 18 8 11.0632 4.4785 -7.2581 19 14 12.7384 2.4416 -6.6820 20 7 9.5138 4.0496 -4.9026 21 6 8.9699 5.1881 -5.6471 22 6 2.7531 1.6532 -1.3029 23 1 -0.3634 -1.0276 -0.0005 24 1 -0.3634 0.5138 0.8899 25 1 -0.3633 0.5138 -0.8901 26 1 3.9094 0.4216 0.7126 27 1 3.3381 1.8458 1.6855 28 1 5.3231 1.0747 -1.3358 29 1 5.9378 2.1464 -0.0545 30 1 5.5585 4.1126 -1.5171 31 1 4.9439 3.0408 -2.7984 32 1 7.5130 2.1428 -2.0423 33 1 9.5244 1.6660 -2.6650 34 1 11.7417 1.8080 -4.1564 35 1 12.4028 4.6614 -5.6960 36 1 10.4545 3.8687 -7.6971 37 1 11.8417 1.4030 -7.2500 38 1 13.7409 2.8573 -7.6957 39 1 9.3393 6.1166 -5.2120 40 1 9.2845 5.1246 -6.6888 41 1 7.8814 5.1699 -5.5945 42 1 2.2138 2.3539 -1.9404 43 1 3.1164 0.7800 -1.8447 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16488024_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:12:34 Heat of formation + Delta-G solvation = -39.603638 kcal Electronic energy + Delta-G solvation = -23392.576993 eV Core-core repulsion = 19827.247638 eV Total energy + Delta-G solvation = -3565.329355 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.55465 -40.70946 -40.03019 -37.97482 -37.53961 -35.97011 -33.79999 -32.29574 -30.89822 -27.88377 -27.46731 -27.00953 -26.70416 -25.12105 -23.05271 -22.65302 -21.40972 -20.67539 -20.35121 -18.85702 -18.19670 -17.64132 -17.04383 -17.00191 -16.64450 -16.43451 -16.21429 -15.96488 -15.78780 -15.36558 -15.24325 -14.84823 -14.70209 -14.31127 -14.26306 -13.82516 -13.70349 -13.49753 -13.44081 -13.16037 -13.03034 -12.91809 -12.48591 -12.35746 -12.31774 -11.94201 -11.81838 -11.58474 -11.33907 -11.12127 -10.73538 -10.42640 -10.12881 -9.71174 -9.06401 -4.98891 0.44222 1.10198 1.55987 1.67394 1.73187 1.96953 2.39614 2.43672 2.84695 3.06210 3.39565 3.53998 3.54574 3.73662 3.75645 3.80692 4.00500 4.01922 4.19496 4.21748 4.34940 4.38135 4.40082 4.44699 4.44999 4.51786 4.53129 4.58504 4.74829 4.77511 4.78599 4.82124 4.88697 4.94632 5.01445 5.03707 5.15668 5.18224 5.34589 5.39406 5.70963 5.99635 6.14068 6.21142 6.26954 6.48875 7.20884 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.378 6.378 3 C 0.058 3.942 4 H 0.087 0.913 5 C -0.131 4.131 6 C -0.106 4.106 7 H 0.096 0.904 8 C -0.119 4.119 9 C 0.123 3.877 10 N -0.720 5.720 11 C 0.589 3.411 12 O -0.547 6.547 13 C -0.053 4.053 14 C -0.136 4.136 15 C -0.197 4.197 16 C 0.012 3.988 17 C -0.056 4.056 18 O -0.532 6.532 19 Si 0.719 3.281 20 N -0.392 5.392 21 C 0.054 3.946 22 C -0.153 4.153 23 H 0.086 0.914 24 H 0.042 0.958 25 H 0.041 0.959 26 H 0.093 0.907 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.075 0.925 30 H 0.070 0.930 31 H 0.069 0.931 32 H 0.404 0.596 33 H 0.147 0.853 34 H 0.154 0.846 35 H 0.124 0.876 36 H 0.378 0.622 37 H -0.257 1.257 38 H -0.255 1.255 39 H 0.075 0.925 40 H 0.099 0.901 41 H 0.100 0.900 42 H 0.070 0.930 43 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.725 -2.812 2.547 3.862 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.297 6.297 3 C 0.000 4.000 4 H 0.105 0.895 5 C -0.169 4.169 6 C -0.125 4.125 7 H 0.115 0.885 8 C -0.157 4.157 9 C -0.001 4.001 10 N -0.372 5.372 11 C 0.377 3.623 12 O -0.426 6.426 13 C -0.167 4.167 14 C -0.162 4.162 15 C -0.221 4.221 16 C -0.106 4.106 17 C -0.165 4.165 18 O -0.339 6.339 19 Si 0.617 3.383 20 N -0.065 5.065 21 C -0.086 4.086 22 C -0.190 4.190 23 H 0.104 0.896 24 H 0.061 0.939 25 H 0.060 0.940 26 H 0.111 0.889 27 H 0.092 0.908 28 H 0.093 0.907 29 H 0.093 0.907 30 H 0.088 0.912 31 H 0.088 0.912 32 H 0.239 0.761 33 H 0.165 0.835 34 H 0.171 0.829 35 H 0.141 0.859 36 H 0.226 0.774 37 H -0.181 1.181 38 H -0.179 1.179 39 H 0.093 0.907 40 H 0.117 0.883 41 H 0.119 0.881 42 H 0.089 0.911 43 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 0.758 -1.946 1.550 2.601 hybrid contribution -1.073 0.262 -0.341 1.156 sum -0.314 -1.685 1.209 2.097 Atomic orbital electron populations 1.22808 0.81016 1.02945 0.99991 1.87947 1.19790 1.27342 1.94579 1.23756 0.93963 0.85361 0.96879 0.89510 1.23275 0.95365 1.00274 0.97938 1.22224 0.93630 0.99624 0.97069 0.88547 1.21744 0.96469 0.99108 0.98340 1.21396 0.81634 0.99449 0.97578 1.45627 1.16022 1.33534 1.41990 1.16985 0.83826 0.82343 0.79099 1.90800 1.63819 1.27626 1.60388 1.20064 0.96597 1.01199 0.98831 1.21296 0.94138 0.98815 1.01989 1.20545 1.00530 1.00959 1.00079 1.21081 0.88409 0.98385 1.02743 1.24939 0.96574 1.09860 0.85130 1.86591 1.60754 1.42063 1.44447 0.94382 0.81430 0.75698 0.86745 1.43763 1.12704 1.24431 1.25567 1.22578 1.01932 0.86700 0.97418 1.23647 0.97378 1.00930 0.97083 0.89574 0.93944 0.93986 0.88885 0.90769 0.90725 0.90676 0.91150 0.91233 0.76114 0.83534 0.82886 0.85856 0.77398 1.18122 1.17935 0.90669 0.88271 0.88107 0.91140 0.89014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.74 10.72 -35.23 -0.38 -1.12 16 3 C 0.06 -0.01 4.31 -25.83 -0.11 -0.12 16 4 H 0.09 -0.10 7.87 -51.93 -0.41 -0.51 16 5 C -0.13 0.15 7.47 -25.92 -0.19 -0.05 16 6 C -0.11 0.20 3.64 -89.81 -0.33 -0.13 16 7 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 8 C -0.12 0.29 5.15 -26.73 -0.14 0.15 16 9 C 0.12 -0.06 5.68 -4.04 -0.02 -0.08 16 10 N -0.72 -0.02 5.54 -61.61 -0.34 -0.36 16 11 C 0.59 1.93 7.77 -12.85 -0.10 1.83 16 12 O -0.55 -3.54 14.63 5.20 0.08 -3.46 16 13 C -0.05 -0.13 6.88 -81.98 -0.56 -0.70 16 14 C -0.14 -0.04 10.35 -39.12 -0.41 -0.45 16 15 C -0.20 0.03 9.37 -39.98 -0.37 -0.35 16 16 C 0.01 0.01 6.15 -81.95 -0.50 -0.49 16 17 C -0.06 0.03 2.99 36.01 0.11 0.14 16 18 O -0.53 -0.15 10.12 -35.23 -0.36 -0.51 16 19 Si 0.72 -1.24 31.10 -169.99 -5.29 -6.53 16 20 N -0.39 -0.97 3.16 -115.62 -0.37 -1.34 16 21 C 0.05 0.10 10.21 59.85 0.61 0.71 16 22 C -0.15 0.12 7.48 -25.83 -0.19 -0.07 16 23 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 24 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 25 H 0.04 -0.04 8.14 -51.92 -0.42 -0.47 16 26 H 0.09 -0.06 8.10 -51.93 -0.42 -0.48 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.07 -0.19 7.88 -51.93 -0.41 -0.60 16 29 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 30 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 31 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 32 H 0.40 -1.02 7.37 -40.82 -0.30 -1.32 16 33 H 0.15 -0.38 7.45 -52.48 -0.39 -0.77 16 34 H 0.15 -0.47 6.85 -52.49 -0.36 -0.83 16 35 H 0.12 -0.16 7.96 -51.93 -0.41 -0.57 16 36 H 0.38 -0.79 8.29 45.56 0.38 -0.41 16 37 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 38 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 39 H 0.07 0.15 8.14 -51.93 -0.42 -0.28 16 40 H 0.10 0.03 5.25 -51.93 -0.27 -0.25 16 41 H 0.10 0.32 6.12 -51.93 -0.32 0.00 16 42 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 43 H 0.09 -0.01 7.92 -51.93 -0.41 -0.42 16 LS Contribution 350.25 15.07 5.28 5.28 Total: 0.00 -8.06 350.25 -9.24 -17.30 By element: Atomic # 1 Polarization: -4.00 SS G_CDS: -6.75 Total: -10.75 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: -1.12 Total: 1.48 kcal Atomic # 7 Polarization: -0.99 SS G_CDS: -0.71 Total: -1.70 kcal Atomic # 8 Polarization: -4.43 SS G_CDS: -0.66 Total: -5.08 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: -5.29 Total: -6.53 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -8.06 -9.24 -17.30 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16488024_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.303 kcal (2) G-P(sol) polarization free energy of solvation -8.057 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.360 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.244 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.301 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.604 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds