Wall clock time and date at job start Sun Mar 7 2021 05:12:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42897 * 114.00266 * 2 1 4 4 H 1.09006 * 112.84814 * 18.80376 * 3 2 1 5 5 C 1.53778 * 113.61626 * 149.99468 * 3 2 1 6 6 C 1.53782 * 87.08068 * 140.06852 * 5 3 2 7 7 H 1.08995 * 113.61620 * 89.20110 * 6 5 3 8 8 C 1.52998 * 113.61625 * 220.02295 * 6 5 3 9 9 C 1.52996 * 109.47199 * 184.99725 * 8 6 5 10 10 N 1.46507 * 109.47093 * 179.97438 * 9 8 6 11 11 C 1.34778 * 119.99755 * 179.97438 * 10 9 8 12 12 O 1.21693 * 120.00315 * 0.02562 * 11 10 9 13 13 C 1.46682 * 119.99680 * 180.02562 * 11 10 9 14 14 C 1.37867 * 126.22827 * 180.02562 * 13 11 10 15 15 C 1.50700 * 126.46180 * 359.97438 * 14 13 11 16 16 C 1.39840 * 107.08428 * 179.97438 * 14 13 11 17 17 C 1.50697 * 126.06904 * 179.97438 * 16 14 13 18 18 O 1.42902 * 109.47324 * 308.96760 * 17 16 14 19 19 Si 1.86294 * 109.47014 * 68.97012 * 17 16 14 20 20 C 1.35455 * 107.86341 * 0.26559 * 16 14 13 21 21 C 1.50698 * 125.56643 * 179.73687 * 20 16 14 22 22 N 1.35534 * 108.86994 * 359.56410 * 20 16 14 23 23 C 1.53773 * 113.69478 * 247.53793 * 3 2 1 24 24 H 1.08992 * 109.46966 * 299.99911 * 1 2 3 25 25 H 1.09000 * 109.46877 * 59.99617 * 1 2 3 26 26 H 1.08998 * 109.46972 * 179.97438 * 1 2 3 27 27 H 1.09004 * 113.60817 * 25.52463 * 5 3 2 28 28 H 1.08991 * 113.69781 * 254.62700 * 5 3 2 29 29 H 1.09009 * 109.47366 * 64.99985 * 8 6 5 30 30 H 1.09000 * 109.47314 * 304.99991 * 8 6 5 31 31 H 1.09000 * 109.47236 * 60.00194 * 9 8 6 32 32 H 1.08995 * 109.47483 * 299.99954 * 9 8 6 33 33 H 0.96995 * 120.00126 * 0.02562 * 10 9 8 34 34 H 1.09001 * 109.47256 * 269.97812 * 15 14 13 35 35 H 1.08999 * 109.46729 * 29.98389 * 15 14 13 36 36 H 1.09005 * 109.47023 * 149.97952 * 15 14 13 37 37 H 1.09002 * 109.47189 * 188.96732 * 17 16 14 38 38 H 0.96695 * 113.99770 * 179.97438 * 18 17 16 39 39 H 1.48498 * 110.00313 * 293.90735 * 19 17 16 40 40 H 1.48499 * 110.00173 * 55.22701 * 19 17 16 41 41 H 1.09001 * 109.47149 * 92.83143 * 21 20 16 42 42 H 1.08993 * 109.47193 * 212.83578 * 21 20 16 43 43 H 1.09002 * 109.47069 * 332.83637 * 21 20 16 44 44 H 0.97001 * 125.68185 * 180.17173 * 22 20 16 45 45 H 1.09006 * 113.61921 * 105.45410 * 23 3 2 46 46 H 1.09003 * 113.61315 * 334.55521 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0789 0.3238 5 6 3.3755 1.3718 0.7046 6 6 3.8221 2.3199 -0.4209 7 1 3.6222 3.3707 -0.2117 8 6 5.2538 2.0713 -0.8998 9 6 5.6412 3.1388 -1.9250 10 7 7.0124 2.9011 -2.3831 11 6 7.5702 3.7222 -3.2947 12 8 6.9351 4.6613 -3.7370 13 6 8.9428 3.4839 -3.7537 14 6 9.6361 4.2385 -4.6760 15 6 9.1269 5.4585 -5.3994 16 6 10.9010 3.6584 -4.8138 17 6 12.0056 4.1428 -5.7173 18 8 11.4957 4.3200 -7.0404 19 14 12.6605 5.7669 -5.0815 20 6 10.9550 2.5800 -3.9959 21 6 12.1372 1.6592 -3.8363 22 7 9.7734 2.4665 -3.3417 23 6 2.7532 1.6511 -1.3013 24 1 -0.3633 0.5138 0.8899 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 3.9094 0.4215 0.7125 28 1 3.3396 1.8453 1.6856 29 1 5.3169 1.0853 -1.3604 30 1 5.9347 2.1195 -0.0500 31 1 5.5782 4.1247 -1.4645 32 1 4.9604 3.0906 -2.7748 33 1 7.5185 2.1523 -2.0308 34 1 8.6481 5.1553 -6.3306 35 1 8.4033 5.9778 -4.7710 36 1 9.9610 6.1247 -5.6199 37 1 12.8104 3.4079 -5.7335 38 1 12.1535 4.6315 -7.6770 39 1 11.6142 6.8148 -5.1921 40 1 13.0880 5.6233 -3.6667 41 1 12.7554 2.0021 -3.0066 42 1 11.7852 0.6479 -3.6334 43 1 12.7262 1.6619 -4.7534 44 1 9.5489 1.7802 -2.6940 45 1 2.2133 2.3504 -1.9398 46 1 3.1169 0.7771 -1.8417 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16488024_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:12:42 Heat of formation + Delta-G solvation = -55.373701 kcal Electronic energy + Delta-G solvation = -25368.357777 eV Core-core repulsion = 21646.806962 eV Total energy + Delta-G solvation = -3721.550815 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.177 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.63762 -40.74708 -40.03901 -37.59540 -37.57224 -36.00240 -33.75563 -33.26653 -31.70671 -29.22430 -28.00251 -27.39132 -26.81142 -26.46016 -25.01231 -22.74645 -22.35878 -20.82521 -20.48184 -19.94333 -19.29686 -18.18471 -17.68699 -17.05961 -16.87002 -16.71917 -16.45178 -16.15222 -16.01439 -15.53617 -15.40265 -15.09066 -14.71078 -14.59854 -14.27764 -14.01372 -13.82475 -13.70475 -13.69576 -13.48677 -13.47464 -13.21306 -13.08090 -13.02976 -12.55661 -12.50924 -12.38398 -12.34884 -11.85655 -11.64889 -11.52742 -11.37031 -10.83178 -10.50297 -10.45341 -10.18797 -9.43941 -8.98130 -4.86276 0.43262 1.24591 1.66542 1.82764 1.94423 2.07421 2.21242 2.41995 2.81624 3.35198 3.50184 3.52098 3.70425 3.73518 3.76153 3.79267 3.95882 4.01658 4.15792 4.17113 4.18434 4.30159 4.35176 4.40704 4.43329 4.48007 4.52141 4.54134 4.65661 4.72764 4.73610 4.75925 4.77270 4.85216 4.90449 4.99565 5.03037 5.14184 5.14411 5.28572 5.30953 5.35455 5.46785 5.72353 5.94501 6.24393 6.27081 6.46230 6.80206 7.18752 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.379 6.379 3 C 0.059 3.941 4 H 0.088 0.912 5 C -0.131 4.131 6 C -0.107 4.107 7 H 0.097 0.903 8 C -0.119 4.119 9 C 0.121 3.879 10 N -0.735 5.735 11 C 0.591 3.409 12 O -0.521 6.521 13 C -0.069 4.069 14 C -0.041 4.041 15 C -0.095 4.095 16 C -0.171 4.171 17 C -0.025 4.025 18 O -0.544 6.544 19 Si 0.668 3.332 20 C 0.078 3.922 21 C -0.097 4.097 22 N -0.535 5.535 23 C -0.152 4.152 24 H 0.042 0.958 25 H 0.042 0.958 26 H 0.086 0.914 27 H 0.092 0.908 28 H 0.074 0.926 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.070 0.930 32 H 0.072 0.928 33 H 0.393 0.607 34 H 0.074 0.926 35 H 0.077 0.923 36 H 0.066 0.934 37 H 0.068 0.932 38 H 0.379 0.621 39 H -0.246 1.246 40 H -0.264 1.264 41 H 0.080 0.920 42 H 0.072 0.928 43 H 0.090 0.910 44 H 0.416 0.584 45 H 0.071 0.929 46 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.630 -3.020 1.724 5.027 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.297 6.297 3 C 0.001 3.999 4 H 0.106 0.894 5 C -0.169 4.169 6 C -0.126 4.126 7 H 0.115 0.885 8 C -0.156 4.156 9 C -0.002 4.002 10 N -0.387 5.387 11 C 0.379 3.621 12 O -0.397 6.397 13 C -0.180 4.180 14 C -0.050 4.050 15 C -0.151 4.151 16 C -0.177 4.177 17 C -0.135 4.135 18 O -0.349 6.349 19 Si 0.569 3.431 20 C -0.041 4.041 21 C -0.154 4.154 22 N -0.133 5.133 23 C -0.190 4.190 24 H 0.061 0.939 25 H 0.061 0.939 26 H 0.104 0.896 27 H 0.110 0.890 28 H 0.092 0.908 29 H 0.091 0.909 30 H 0.091 0.909 31 H 0.089 0.911 32 H 0.090 0.910 33 H 0.226 0.774 34 H 0.093 0.907 35 H 0.096 0.904 36 H 0.085 0.915 37 H 0.086 0.914 38 H 0.226 0.774 39 H -0.171 1.171 40 H -0.189 1.189 41 H 0.098 0.902 42 H 0.091 0.909 43 H 0.108 0.892 44 H 0.254 0.746 45 H 0.090 0.910 46 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 2.495 -2.143 2.411 4.078 hybrid contribution -0.529 -1.095 0.749 1.428 sum 1.966 -3.238 3.160 4.932 Atomic orbital electron populations 1.22811 0.80964 1.02964 1.00027 1.87945 1.19843 1.27326 1.94587 1.23713 0.93928 0.85405 0.96852 0.89439 1.23278 0.95457 1.00214 0.97952 1.22226 0.93553 0.99674 0.97111 0.88468 1.21745 0.96538 0.98896 0.98457 1.21405 0.81792 0.99221 0.97776 1.45886 1.16418 1.31814 1.44561 1.16970 0.84126 0.82275 0.78724 1.90842 1.62111 1.29893 1.56881 1.20085 0.93141 0.96786 1.07937 1.19836 0.92461 0.97213 0.95454 1.20507 1.01187 0.93530 0.99900 1.18478 0.96074 0.98682 1.04498 1.23884 0.95678 1.08305 0.85675 1.86529 1.40298 1.90020 1.18068 0.96694 0.85070 0.77395 0.83963 1.20250 0.88372 0.98201 0.97280 1.20530 0.93587 0.97086 1.04180 1.41765 1.11712 1.24623 1.35198 1.23617 0.97347 1.00922 0.97107 0.93929 0.93940 0.89558 0.88988 0.90771 0.90894 0.90923 0.91120 0.90989 0.77376 0.90718 0.90417 0.91495 0.91388 0.77384 1.17085 1.18943 0.90169 0.90883 0.89154 0.74591 0.91041 0.89051 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.85 101.05 1.10 1.09 16 2 O -0.38 -0.81 10.72 -35.23 -0.38 -1.19 16 3 C 0.06 0.01 4.31 -25.92 -0.11 -0.11 16 4 H 0.09 -0.08 7.87 -51.93 -0.41 -0.49 16 5 C -0.13 0.12 7.47 -25.92 -0.19 -0.08 16 6 C -0.11 0.17 3.65 -89.81 -0.33 -0.16 16 7 H 0.10 -0.18 8.13 -51.93 -0.42 -0.60 16 8 C -0.12 0.24 5.16 -26.73 -0.14 0.11 16 9 C 0.12 0.01 5.67 -4.04 -0.02 -0.02 16 10 N -0.73 -0.33 5.55 -61.62 -0.34 -0.67 16 11 C 0.59 2.49 7.79 -12.85 -0.10 2.39 16 12 O -0.52 -4.02 14.80 5.20 0.08 -3.94 16 13 C -0.07 -0.25 7.06 -81.98 -0.58 -0.83 16 14 C -0.04 -0.21 5.88 -104.16 -0.61 -0.82 16 15 C -0.09 -0.52 9.14 36.01 0.33 -0.19 16 16 C -0.17 -0.54 4.43 -105.02 -0.47 -1.01 16 17 C -0.02 -0.02 2.78 36.00 0.10 0.08 16 18 O -0.54 -0.59 12.34 -35.23 -0.43 -1.02 16 19 Si 0.67 0.22 31.50 -169.99 -5.35 -5.13 16 20 C 0.08 0.08 7.13 -81.95 -0.58 -0.51 16 21 C -0.10 0.24 10.16 36.00 0.37 0.61 16 22 N -0.54 -0.19 5.99 -5.70 -0.03 -0.22 16 23 C -0.15 0.08 7.47 -25.92 -0.19 -0.12 16 24 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 25 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 26 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 27 H 0.09 -0.04 8.10 -51.93 -0.42 -0.46 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 29 H 0.07 -0.16 7.84 -51.92 -0.41 -0.57 16 30 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 31 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 32 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 33 H 0.39 -0.99 7.60 -40.82 -0.31 -1.30 16 34 H 0.07 0.42 8.14 -51.93 -0.42 -0.01 16 35 H 0.08 0.51 6.48 -51.93 -0.34 0.17 16 36 H 0.07 0.33 5.01 -51.93 -0.26 0.07 16 37 H 0.07 -0.11 6.47 -51.93 -0.34 -0.45 16 38 H 0.38 -1.52 8.74 45.56 0.40 -1.12 16 39 H -0.25 -0.90 5.76 56.52 0.33 -0.58 16 40 H -0.26 -0.89 7.11 56.52 0.40 -0.48 16 41 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 42 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 43 H 0.09 -0.28 6.87 -51.93 -0.36 -0.63 16 44 H 0.42 -1.35 8.19 -40.82 -0.33 -1.69 16 45 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 46 H 0.09 0.02 7.90 -51.93 -0.41 -0.39 16 LS Contribution 371.46 15.07 5.60 5.60 Total: 0.00 -9.96 371.46 -9.83 -19.79 By element: Atomic # 1 Polarization: -6.11 SS G_CDS: -7.53 Total: -13.64 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: -1.44 Total: 0.43 kcal Atomic # 7 Polarization: -0.52 SS G_CDS: -0.38 Total: -0.90 kcal Atomic # 8 Polarization: -5.41 SS G_CDS: -0.74 Total: -6.15 kcal Atomic # 14 Polarization: 0.22 SS G_CDS: -5.35 Total: -5.13 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -9.96 -9.83 -19.79 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16488024_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.582 kcal (2) G-P(sol) polarization free energy of solvation -9.959 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.540 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.833 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.792 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.374 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds