Wall clock time and date at job start Sun Mar 7 2021 05:12:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35658 * 116.99829 * 2 1 4 4 C 1.38405 * 120.12017 * 0.23770 * 3 2 1 5 5 C 1.38728 * 120.03144 * 180.26951 * 4 3 2 6 6 O 1.35716 * 119.86246 * 179.76207 * 5 4 3 7 7 C 1.42894 * 117.00140 * 359.97438 * 6 5 4 8 8 C 1.39140 * 120.27411 * 359.74982 * 5 4 3 9 9 C 1.50701 * 119.88223 * 180.02562 * 8 5 4 10 10 O 1.42900 * 109.46941 * 284.97463 * 9 8 5 11 11 Si 1.86302 * 109.47143 * 164.97534 * 9 8 5 12 12 C 1.37591 * 120.23951 * 359.97438 * 8 5 4 13 13 C 1.39819 * 119.96294 * 0.02562 * 12 8 5 14 14 C 1.47301 * 120.13232 * 179.97438 * 13 12 8 15 15 O 1.21623 * 119.99651 * 179.97438 * 14 13 12 16 16 N 1.34769 * 120.00363 * 359.97438 * 14 13 12 17 17 C 1.46500 * 120.00241 * 180.02562 * 16 14 13 18 18 C 1.53006 * 109.46998 * 180.02562 * 17 16 14 19 19 C 1.52999 * 109.46626 * 179.97438 * 18 17 16 20 20 H 1.08995 * 112.85123 * 43.81036 * 19 18 17 21 21 C 1.53778 * 113.61751 * 272.49599 * 19 18 17 22 22 C 1.53781 * 87.08330 * 220.02338 * 21 19 18 23 23 H 1.09005 * 113.61497 * 270.88623 * 22 21 19 24 24 O 1.42900 * 113.69268 * 139.99446 * 22 21 19 25 25 C 1.42895 * 113.99990 * 112.46387 * 24 22 21 26 26 C 1.53780 * 87.08114 * 25.43117 * 22 21 19 27 27 H 1.08995 * 109.47176 * 299.99559 * 1 2 3 28 28 H 1.09009 * 109.47237 * 59.99734 * 1 2 3 29 29 H 1.08996 * 109.47027 * 179.97438 * 1 2 3 30 30 H 1.07998 * 119.98516 * 359.97438 * 4 3 2 31 31 H 1.08996 * 109.47500 * 299.99980 * 7 6 5 32 32 H 1.09001 * 109.47113 * 59.99896 * 7 6 5 33 33 H 1.09006 * 109.47498 * 179.97438 * 7 6 5 34 34 H 1.08993 * 109.47196 * 44.97158 * 9 8 5 35 35 H 0.96705 * 114.00273 * 59.99615 * 10 9 8 36 36 H 1.48502 * 109.99821 * 178.67848 * 11 9 8 37 37 H 1.48497 * 109.99621 * 299.99638 * 11 9 8 38 38 H 1.08001 * 120.01391 * 179.97438 * 12 8 5 39 39 H 0.97010 * 119.99849 * 0.02562 * 16 14 13 40 40 H 1.09000 * 109.47175 * 60.00333 * 17 16 14 41 41 H 1.09001 * 109.47297 * 299.99840 * 17 16 14 42 42 H 1.08993 * 109.46955 * 300.00226 * 18 17 16 43 43 H 1.09000 * 109.47050 * 60.00054 * 18 17 16 44 44 H 1.09000 * 113.61358 * 334.57094 * 21 19 18 45 45 H 1.09001 * 113.61211 * 105.47347 * 21 19 18 46 46 H 1.09002 * 109.47171 * 60.00586 * 25 24 22 47 47 H 1.09003 * 109.46819 * 180.02562 * 25 24 22 48 48 H 1.08999 * 109.47213 * 299.99477 * 25 24 22 49 49 H 1.08999 * 113.61462 * 220.01794 * 26 22 21 50 50 H 1.09003 * 113.68916 * 89.13137 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2935 2.3711 0.0050 5 6 1.9251 3.6062 -0.0007 6 8 1.1849 4.7437 -0.0007 7 6 -0.2360 4.5931 0.0047 8 6 3.3143 3.6835 -0.0061 9 6 3.9913 5.0299 -0.0117 10 8 3.8893 5.6090 -1.3141 11 14 5.7876 4.8237 0.4373 12 6 4.0723 2.5352 -0.0054 13 6 3.4461 1.2851 0.0003 14 6 4.2539 0.0534 0.0005 15 8 3.7066 -1.0327 0.0059 16 7 5.5994 0.1299 -0.0053 17 6 6.4028 -1.0952 -0.0056 18 6 7.8888 -0.7305 -0.0120 19 6 8.7277 -2.0100 -0.0117 20 1 8.3511 -2.7632 -0.7037 21 6 9.0194 -2.5551 1.3963 22 6 10.4362 -2.8773 0.8926 23 1 10.5269 -3.8688 0.4488 24 8 11.4620 -2.6012 1.8483 25 6 12.1228 -3.7669 2.3449 26 6 10.2389 -1.7557 -0.1408 27 1 -0.3633 0.5137 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 0.2149 2.3165 0.0084 31 1 -0.5464 4.0418 -0.8828 32 1 -0.5400 4.0459 0.8971 33 1 -0.7057 5.5768 0.0046 34 1 3.5078 5.6827 0.7150 35 1 2.9801 5.7455 -1.6138 36 1 6.4738 6.1402 0.4043 37 1 5.9072 4.2224 1.7899 38 1 5.1504 2.5995 -0.0100 39 1 6.0359 0.9962 -0.0092 40 1 6.1687 -1.6829 -0.8932 41 1 6.1761 -1.6786 0.8868 42 1 8.1157 -0.1469 -0.9041 43 1 8.1225 -0.1430 0.8758 44 1 8.9956 -1.7915 2.1737 45 1 8.4353 -3.4392 1.6519 46 1 12.5898 -4.3003 1.5169 47 1 12.8864 -3.4727 3.0649 48 1 11.3959 -4.4168 2.8321 49 1 10.6393 -1.9944 -1.1261 50 1 10.5483 -0.7730 0.2151 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16488024_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:12:46 Heat of formation + Delta-G solvation = -132.749937 kcal Electronic energy + Delta-G solvation = -31504.339011 eV Core-core repulsion = 27079.268297 eV Total energy + Delta-G solvation = -4425.070714 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.181 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -42.07792 -40.70382 -40.36285 -39.73348 -38.38067 -37.47326 -36.92429 -35.72426 -32.46639 -32.19083 -30.99656 -29.13934 -28.33508 -27.67676 -26.71433 -26.08893 -25.65962 -24.18588 -22.90362 -22.39195 -21.36442 -20.47715 -20.05044 -18.65580 -18.52629 -17.79312 -17.56834 -17.30188 -17.14683 -16.74420 -16.68953 -16.46258 -16.31632 -16.15297 -15.93396 -15.82704 -15.54116 -15.46278 -15.04468 -14.69731 -14.27145 -14.17663 -14.02817 -13.68808 -13.56846 -13.47766 -13.37146 -13.27935 -12.95016 -12.85817 -12.67542 -12.55954 -12.37528 -12.27213 -12.11047 -11.74974 -11.66878 -11.50954 -11.31223 -11.25504 -11.15915 -10.61678 -10.37064 -9.98138 -9.89350 -9.13594 -4.95894 -0.22096 0.12113 1.38106 1.61054 1.88337 1.93862 2.00362 2.14036 2.24013 2.73435 2.89867 3.42337 3.48331 3.51187 3.61633 3.70267 3.73179 3.81257 3.87064 3.90591 3.94622 3.98680 4.07934 4.09144 4.12031 4.12453 4.21285 4.26973 4.32768 4.34671 4.41455 4.44290 4.49303 4.51774 4.59917 4.68464 4.78003 4.79543 4.84449 4.85578 4.90184 4.98149 5.02110 5.06230 5.14867 5.25903 5.27477 5.42382 5.55688 5.91552 6.26402 6.32200 6.59567 6.62683 7.42865 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.273 6.273 3 C 0.231 3.769 4 C -0.309 4.309 5 C 0.206 3.794 6 O -0.309 6.309 7 C 0.023 3.977 8 C -0.190 4.190 9 C -0.065 4.065 10 O -0.536 6.536 11 Si 0.734 3.266 12 C 0.000 4.000 13 C -0.205 4.205 14 C 0.565 3.435 15 O -0.519 6.519 16 N -0.733 5.733 17 C 0.122 3.878 18 C -0.121 4.121 19 C -0.106 4.106 20 H 0.096 0.904 21 C -0.152 4.152 22 C 0.058 3.942 23 H 0.087 0.913 24 O -0.378 6.378 25 C 0.029 3.971 26 C -0.131 4.131 27 H 0.057 0.943 28 H 0.057 0.943 29 H 0.107 0.893 30 H 0.145 0.855 31 H 0.061 0.939 32 H 0.060 0.940 33 H 0.107 0.893 34 H 0.075 0.925 35 H 0.366 0.634 36 H -0.252 1.252 37 H -0.246 1.246 38 H 0.141 0.859 39 H 0.397 0.603 40 H 0.069 0.931 41 H 0.069 0.931 42 H 0.076 0.924 43 H 0.074 0.926 44 H 0.091 0.909 45 H 0.069 0.931 46 H 0.042 0.958 47 H 0.085 0.915 48 H 0.041 0.959 49 H 0.073 0.927 50 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.446 0.405 -0.822 1.711 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.183 6.183 3 C 0.182 3.818 4 C -0.328 4.328 5 C 0.159 3.841 6 O -0.221 6.221 7 C -0.072 4.072 8 C -0.191 4.191 9 C -0.174 4.174 10 O -0.341 6.341 11 Si 0.632 3.368 12 C -0.018 4.018 13 C -0.209 4.209 14 C 0.352 3.648 15 O -0.395 6.395 16 N -0.387 5.387 17 C -0.001 4.001 18 C -0.159 4.159 19 C -0.125 4.125 20 H 0.115 0.885 21 C -0.190 4.190 22 C 0.000 4.000 23 H 0.105 0.895 24 O -0.297 6.297 25 C -0.067 4.067 26 C -0.169 4.169 27 H 0.075 0.925 28 H 0.076 0.924 29 H 0.126 0.874 30 H 0.162 0.838 31 H 0.080 0.920 32 H 0.078 0.922 33 H 0.126 0.874 34 H 0.092 0.908 35 H 0.214 0.786 36 H -0.176 1.176 37 H -0.171 1.171 38 H 0.158 0.842 39 H 0.232 0.768 40 H 0.088 0.912 41 H 0.087 0.913 42 H 0.094 0.906 43 H 0.092 0.908 44 H 0.110 0.890 45 H 0.088 0.912 46 H 0.060 0.940 47 H 0.104 0.896 48 H 0.060 0.940 49 H 0.092 0.908 50 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -0.397 -0.031 -0.156 0.428 hybrid contribution -2.163 0.676 0.318 2.288 sum -2.560 0.645 0.162 2.645 Atomic orbital electron populations 1.23242 0.78261 1.04881 1.01274 1.86410 1.21139 1.24971 1.85812 1.18712 0.90650 0.84414 0.88056 1.21272 1.01084 0.91464 1.19020 1.18740 0.90350 0.84792 0.90228 1.86032 1.19910 1.28929 1.87263 1.23213 0.77383 1.04714 1.01865 1.19438 0.90447 0.96793 1.12454 1.25260 1.13211 0.90488 0.88405 1.86723 1.32117 1.83581 1.31669 0.93366 0.75411 0.85533 0.82480 1.20682 0.98640 0.89853 0.92624 1.19116 0.90713 0.93702 1.17337 1.17762 0.81799 0.88490 0.76701 1.90851 1.71441 1.28665 1.48534 1.45897 1.05979 1.09968 1.76822 1.21365 0.89480 0.86577 1.02708 1.21768 0.93063 0.97738 1.03289 1.22222 0.94768 0.97587 0.97919 0.88543 1.23618 0.96243 1.01941 0.97207 1.23736 0.87303 0.98617 0.90355 0.89547 1.87947 1.51143 1.31199 1.59391 1.22800 0.96808 0.88442 0.98695 1.23281 0.94986 0.99872 0.98733 0.92454 0.92398 0.87434 0.83754 0.92034 0.92174 0.87429 0.90783 0.78620 1.17621 1.17072 0.84195 0.76770 0.91248 0.91284 0.90564 0.90753 0.89013 0.91176 0.93974 0.89627 0.94003 0.90821 0.88872 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.27 -1.02 8.56 -40.60 -0.35 -1.36 16 3 C 0.23 0.66 6.70 -38.73 -0.26 0.41 16 4 C -0.31 -0.23 8.01 -39.34 -0.31 -0.55 16 5 C 0.21 0.20 6.62 -39.07 -0.26 -0.06 16 6 O -0.31 0.02 9.36 -18.85 -0.18 -0.16 16 7 C 0.02 -0.07 9.80 101.05 0.99 0.92 16 8 C -0.19 -0.19 5.28 -104.52 -0.55 -0.75 16 9 C -0.07 -0.05 2.32 36.01 0.08 0.03 16 10 O -0.54 -0.77 12.65 -35.23 -0.45 -1.21 16 11 Si 0.73 -0.32 30.16 -169.99 -5.13 -5.44 16 12 C 0.00 0.00 8.14 -39.23 -0.32 -0.32 16 13 C -0.20 -0.54 5.89 -104.84 -0.62 -1.16 16 14 C 0.56 2.16 7.76 -12.58 -0.10 2.06 16 15 O -0.52 -3.97 15.15 -16.67 -0.25 -4.22 16 16 N -0.73 -0.28 5.50 -61.42 -0.34 -0.62 16 17 C 0.12 -0.01 5.66 -4.04 -0.02 -0.04 16 18 C -0.12 0.27 5.17 -26.73 -0.14 0.13 16 19 C -0.11 0.18 3.65 -89.81 -0.33 -0.15 16 20 H 0.10 -0.19 8.13 -51.93 -0.42 -0.62 16 21 C -0.15 0.09 7.47 -25.92 -0.19 -0.11 16 22 C 0.06 0.00 4.31 -25.92 -0.11 -0.11 16 23 H 0.09 -0.08 7.87 -51.93 -0.41 -0.49 16 24 O -0.38 -0.80 10.72 -35.23 -0.38 -1.18 16 25 C 0.03 -0.01 10.85 101.05 1.10 1.09 16 26 C -0.13 0.13 7.47 -25.92 -0.19 -0.06 16 27 H 0.06 -0.12 7.65 -51.93 -0.40 -0.52 16 28 H 0.06 -0.13 7.67 -51.92 -0.40 -0.53 16 29 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 30 H 0.14 -0.23 4.50 -52.49 -0.24 -0.47 16 31 H 0.06 -0.24 7.65 -51.93 -0.40 -0.64 16 32 H 0.06 -0.22 7.65 -51.93 -0.40 -0.62 16 33 H 0.11 -0.50 8.14 -51.93 -0.42 -0.92 16 34 H 0.07 0.07 7.82 -51.93 -0.41 -0.33 16 35 H 0.37 -0.19 8.59 45.56 0.39 0.20 16 36 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 37 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 38 H 0.14 -0.35 3.43 -52.49 -0.18 -0.53 16 39 H 0.40 -1.00 6.49 -40.82 -0.26 -1.27 16 40 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 41 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 42 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 43 H 0.07 -0.18 7.84 -51.93 -0.41 -0.59 16 44 H 0.09 0.01 7.89 -51.93 -0.41 -0.40 16 45 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 46 H 0.04 -0.04 8.14 -51.93 -0.42 -0.47 16 47 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 48 H 0.04 -0.03 8.14 -51.93 -0.42 -0.46 16 49 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 50 H 0.09 -0.05 8.10 -51.93 -0.42 -0.48 16 LS Contribution 403.90 15.07 6.09 6.09 Total: 0.00 -9.40 403.90 -9.00 -18.40 By element: Atomic # 1 Polarization: -4.83 SS G_CDS: -7.78 Total: -12.61 kcal Atomic # 6 Polarization: 2.57 SS G_CDS: -0.24 Total: 2.33 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -0.34 Total: -0.62 kcal Atomic # 8 Polarization: -6.54 SS G_CDS: -1.60 Total: -8.14 kcal Atomic # 14 Polarization: -0.32 SS G_CDS: -5.13 Total: -5.44 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -9.40 -9.00 -18.40 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16488024_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.351 kcal (2) G-P(sol) polarization free energy of solvation -9.398 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.749 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.001 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.398 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.750 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds