Wall clock time and date at job start Sun Mar 7 2021 05:14:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42902 * 114.00495 * 2 1 4 4 H 1.09005 * 112.84349 * 18.79837 * 3 2 1 5 5 C 1.53774 * 113.61866 * 149.99701 * 3 2 1 6 6 C 1.53781 * 87.08145 * 139.98212 * 5 3 2 7 7 H 1.09001 * 113.61304 * 89.19794 * 6 5 3 8 8 C 1.53004 * 113.61616 * 220.02004 * 6 5 3 9 9 C 1.53003 * 109.46976 * 184.99764 * 8 6 5 10 10 N 1.46496 * 109.46732 * 179.97438 * 9 8 6 11 11 C 1.34781 * 120.00019 * 180.02562 * 10 9 8 12 12 O 1.21586 * 119.99625 * 0.02562 * 11 10 9 13 13 C 1.47649 * 120.00408 * 180.02562 * 11 10 9 14 14 C 1.40166 * 119.97038 * 359.97438 * 13 11 10 15 15 C 1.36357 * 120.66946 * 180.02562 * 14 13 11 16 16 C 1.39336 * 120.23409 * 359.67228 * 15 14 13 17 17 N 1.37394 * 133.24548 * 179.60018 * 16 15 14 18 18 C 1.36866 * 109.97890 * 180.50887 * 17 16 15 19 19 C 1.34196 * 109.96795 * 0.27239 * 18 17 16 20 20 C 1.50696 * 126.53915 * 179.97438 * 19 18 17 21 21 O 1.42903 * 109.47281 * 255.02169 * 20 19 18 22 22 Si 1.86299 * 109.47332 * 15.02422 * 20 19 18 23 23 C 1.40910 * 119.63865 * 0.62655 * 16 15 14 24 24 C 1.39187 * 119.97654 * 180.02562 * 13 11 10 25 25 C 1.53775 * 113.61559 * 247.50149 * 3 2 1 26 26 H 1.09000 * 109.47197 * 180.02562 * 1 2 3 27 27 H 1.08998 * 109.47276 * 300.00236 * 1 2 3 28 28 H 1.08998 * 109.47071 * 60.00075 * 1 2 3 29 29 H 1.09001 * 113.61385 * 25.43771 * 5 3 2 30 30 H 1.08997 * 113.69393 * 254.54604 * 5 3 2 31 31 H 1.09002 * 109.46852 * 65.00183 * 8 6 5 32 32 H 1.08997 * 109.47080 * 304.99809 * 8 6 5 33 33 H 1.09001 * 109.46501 * 60.00303 * 9 8 6 34 34 H 1.08997 * 109.47252 * 299.99939 * 9 8 6 35 35 H 0.96999 * 120.00172 * 0.02562 * 10 9 8 36 36 H 1.08002 * 119.67044 * 0.02562 * 14 13 11 37 37 H 1.08001 * 119.88369 * 180.02562 * 15 14 13 38 38 H 0.97001 * 125.01333 * 0.78402 * 17 16 15 39 39 H 1.08001 * 125.01438 * 180.22937 * 18 17 16 40 40 H 1.09004 * 109.46871 * 135.02320 * 20 19 18 41 41 H 0.96699 * 114.00001 * 180.02562 * 21 20 19 42 42 H 1.48501 * 110.00196 * 299.99777 * 22 20 19 43 43 H 1.48503 * 110.00098 * 61.31480 * 22 20 19 44 44 H 1.08003 * 120.30024 * 359.97438 * 24 13 11 45 45 H 1.08998 * 113.61868 * 105.46146 * 25 3 2 46 46 H 1.09006 * 113.61545 * 334.56380 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3137 2.0789 0.3237 5 6 3.3755 1.3719 0.7045 6 6 3.8228 2.3181 -0.4222 7 1 3.6235 3.3694 -0.2144 8 6 5.2544 2.0679 -0.9007 9 6 5.6426 3.1338 -1.9274 10 7 7.0135 2.8945 -2.3850 11 6 7.5723 3.7147 -3.2969 12 8 6.9388 4.6533 -3.7394 13 6 8.9539 3.4733 -3.7586 14 6 9.6839 2.3913 -3.2477 15 6 10.9609 2.1555 -3.6636 16 6 11.5552 2.9870 -4.6107 17 7 12.7951 3.0044 -5.2023 18 6 12.8823 4.0555 -6.0745 19 6 11.7317 4.7460 -6.0765 20 6 11.4219 5.9710 -6.8978 21 8 11.4578 7.1280 -6.0598 22 14 12.6879 6.1465 -8.2532 23 6 10.8340 4.0818 -5.1272 24 6 9.5306 4.3209 -4.7000 25 6 2.7534 1.6488 -1.3017 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 3.9088 0.4213 0.7138 30 1 3.3398 1.8466 1.6850 31 1 5.3167 1.0813 -1.3599 32 1 5.9352 2.1168 -0.0509 33 1 5.5801 4.1203 -1.4680 34 1 4.9617 3.0848 -2.7771 35 1 7.5191 2.1459 -2.0316 36 1 9.2305 1.7378 -2.5171 37 1 11.5117 1.3178 -3.2618 38 1 13.5028 2.3637 -5.0304 39 1 13.7495 4.2943 -6.6724 40 1 10.4297 5.8718 -7.3381 41 1 11.2668 7.9551 -6.5229 42 1 14.0451 6.2825 -7.6661 43 1 12.6389 4.9640 -9.1503 44 1 8.9719 5.1560 -5.0961 45 1 2.2141 2.3476 -1.9412 46 1 3.1166 0.7739 -1.8411 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16488024_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:14:23 Heat of formation + Delta-G solvation = -28.033030 kcal Electronic energy + Delta-G solvation = -26945.913213 eV Core-core repulsion = 22996.407176 eV Total energy + Delta-G solvation = -3949.506037 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.47880 -40.81250 -40.34518 -37.87694 -37.55582 -37.32702 -35.82990 -33.37463 -32.10770 -30.75225 -30.26552 -27.73759 -26.75534 -26.42111 -25.85993 -24.07990 -23.48642 -22.57577 -21.46896 -20.65551 -20.39970 -19.08315 -18.42600 -18.28185 -17.60560 -17.46583 -16.90784 -16.65652 -16.44903 -16.00204 -15.72706 -15.65543 -15.41513 -15.31668 -15.03008 -14.76658 -14.76457 -14.63204 -14.14338 -13.82204 -13.69077 -13.44490 -13.41705 -13.39904 -13.01528 -12.67778 -12.58318 -12.37310 -12.30051 -12.00661 -11.84764 -11.78164 -11.54130 -11.29378 -10.78537 -10.76542 -10.39872 -10.18387 -10.00193 -9.31842 -8.83253 -5.01683 -0.03885 0.19482 1.29446 1.42477 1.66266 1.93676 1.96241 2.03862 2.23283 2.87244 2.98964 3.43887 3.54091 3.57471 3.59891 3.68039 3.77957 3.82511 3.85867 3.95542 4.05271 4.13552 4.22953 4.26887 4.28297 4.39644 4.41384 4.47423 4.48519 4.56095 4.58841 4.64776 4.77404 4.79085 4.80833 4.82574 4.94075 5.00552 5.02699 5.09314 5.21761 5.26507 5.37991 5.39129 5.46545 5.55559 5.59485 5.97755 6.29612 6.34488 6.59643 6.75186 7.36761 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.379 6.379 3 C 0.058 3.942 4 H 0.087 0.913 5 C -0.132 4.132 6 C -0.106 4.106 7 H 0.097 0.903 8 C -0.119 4.119 9 C 0.120 3.880 10 N -0.730 5.730 11 C 0.564 3.436 12 O -0.538 6.538 13 C -0.168 4.168 14 C -0.066 4.066 15 C -0.133 4.133 16 C 0.119 3.881 17 N -0.584 5.584 18 C 0.056 3.944 19 C -0.144 4.144 20 C -0.039 4.039 21 O -0.546 6.546 22 Si 0.687 3.313 23 C -0.101 4.101 24 C 0.009 3.991 25 C -0.152 4.152 26 H 0.085 0.915 27 H 0.042 0.958 28 H 0.042 0.958 29 H 0.092 0.908 30 H 0.073 0.927 31 H 0.073 0.927 32 H 0.073 0.927 33 H 0.069 0.931 34 H 0.070 0.930 35 H 0.399 0.601 36 H 0.129 0.871 37 H 0.129 0.871 38 H 0.422 0.578 39 H 0.170 0.830 40 H 0.072 0.928 41 H 0.380 0.620 42 H -0.253 1.253 43 H -0.256 1.256 44 H 0.139 0.861 45 H 0.070 0.930 46 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.468 -1.277 -0.438 1.994 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.297 6.297 3 C 0.000 4.000 4 H 0.105 0.895 5 C -0.169 4.169 6 C -0.125 4.125 7 H 0.115 0.885 8 C -0.157 4.157 9 C -0.003 4.003 10 N -0.382 5.382 11 C 0.353 3.647 12 O -0.416 6.416 13 C -0.173 4.173 14 C -0.086 4.086 15 C -0.154 4.154 16 C 0.010 3.990 17 N -0.187 5.187 18 C -0.071 4.071 19 C -0.151 4.151 20 C -0.150 4.150 21 O -0.352 6.352 22 Si 0.588 3.412 23 C -0.106 4.106 24 C -0.010 4.010 25 C -0.190 4.190 26 H 0.104 0.896 27 H 0.060 0.940 28 H 0.060 0.940 29 H 0.110 0.890 30 H 0.092 0.908 31 H 0.091 0.909 32 H 0.092 0.908 33 H 0.087 0.913 34 H 0.088 0.912 35 H 0.235 0.765 36 H 0.147 0.853 37 H 0.146 0.854 38 H 0.259 0.741 39 H 0.187 0.813 40 H 0.090 0.910 41 H 0.227 0.773 42 H -0.178 1.178 43 H -0.180 1.180 44 H 0.157 0.843 45 H 0.089 0.911 46 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 2.079 -1.632 -0.675 2.728 hybrid contribution 0.159 -0.852 0.645 1.080 sum 2.238 -2.484 -0.030 3.344 Atomic orbital electron populations 1.22804 0.81033 1.02919 0.99998 1.87946 1.19782 1.27391 1.94595 1.23729 0.93940 0.85346 0.96942 0.89475 1.23280 0.95394 1.00284 0.97958 1.22230 0.93692 0.99615 0.97008 0.88505 1.21747 0.96374 0.98992 0.98563 1.21381 0.82202 0.99102 0.97639 1.45897 1.16058 1.32064 1.44227 1.18151 0.86046 0.81896 0.78657 1.90793 1.63728 1.30200 1.56899 1.19552 0.94791 0.99656 1.03276 1.20595 0.93406 0.96102 0.98477 1.19666 0.95924 1.00702 0.99081 1.18441 0.85790 0.97606 0.97151 1.41684 1.13210 1.26978 1.36791 1.21580 0.98972 0.90341 0.96191 1.19640 0.93899 0.98809 1.02774 1.24003 1.07725 0.84551 0.98717 1.86536 1.94295 1.16013 1.38352 0.94991 0.78418 0.88276 0.79492 1.18897 0.94635 0.96609 1.00445 1.20671 0.91850 0.96515 0.91960 1.23614 0.97361 1.00937 0.97064 0.89601 0.93967 0.93959 0.88965 0.90806 0.90853 0.90831 0.91267 0.91202 0.76543 0.85304 0.85359 0.74074 0.81329 0.90963 0.77252 1.17785 1.18028 0.84296 0.91098 0.89028 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.85 101.05 1.10 1.09 16 2 O -0.38 -0.85 10.71 -35.23 -0.38 -1.23 16 3 C 0.06 0.01 4.31 -25.93 -0.11 -0.10 16 4 H 0.09 -0.07 7.87 -51.93 -0.41 -0.48 16 5 C -0.13 0.09 7.47 -25.92 -0.19 -0.10 16 6 C -0.11 0.15 3.65 -89.81 -0.33 -0.18 16 7 H 0.10 -0.16 8.13 -51.93 -0.42 -0.59 16 8 C -0.12 0.21 5.17 -26.73 -0.14 0.08 16 9 C 0.12 0.04 5.66 -4.04 -0.02 0.01 16 10 N -0.73 -0.53 5.51 -61.31 -0.34 -0.87 16 11 C 0.56 2.31 7.76 -12.42 -0.10 2.22 16 12 O -0.54 -4.23 16.33 5.29 0.09 -4.14 16 13 C -0.17 -0.53 5.87 -104.98 -0.62 -1.14 16 14 C -0.07 -0.03 9.46 -39.54 -0.37 -0.41 16 15 C -0.13 -0.06 10.00 -39.85 -0.40 -0.46 16 16 C 0.12 0.26 7.27 -83.95 -0.61 -0.35 16 17 N -0.58 -0.17 6.05 -10.61 -0.06 -0.24 16 18 C 0.06 0.08 10.43 -16.73 -0.17 -0.10 16 19 C -0.14 -0.44 5.61 -102.69 -0.58 -1.02 16 20 C -0.04 -0.04 3.05 36.00 0.11 0.07 16 21 O -0.55 -0.80 12.86 -35.23 -0.45 -1.26 16 22 Si 0.69 -0.83 30.80 -169.99 -5.24 -6.06 16 23 C -0.10 -0.40 6.34 -105.16 -0.67 -1.07 16 24 C 0.01 0.04 9.64 -38.86 -0.37 -0.33 16 25 C -0.15 0.06 7.46 -25.92 -0.19 -0.14 16 26 H 0.09 -0.08 8.14 -51.93 -0.42 -0.51 16 27 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 28 H 0.04 -0.03 8.14 -51.93 -0.42 -0.46 16 29 H 0.09 -0.02 8.10 -51.93 -0.42 -0.44 16 30 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.07 -0.14 7.84 -51.93 -0.41 -0.55 16 32 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 33 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 34 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 35 H 0.40 -0.81 6.47 -40.82 -0.26 -1.08 16 36 H 0.13 -0.35 6.36 -52.49 -0.33 -0.68 16 37 H 0.13 -0.28 8.06 -52.49 -0.42 -0.70 16 38 H 0.42 -1.27 8.96 -40.82 -0.37 -1.64 16 39 H 0.17 -0.11 6.30 -52.49 -0.33 -0.44 16 40 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 41 H 0.38 -1.39 8.74 45.56 0.40 -0.99 16 42 H -0.25 -0.30 7.04 56.52 0.40 0.10 16 43 H -0.26 -0.32 7.11 56.52 0.40 0.09 16 44 H 0.14 0.67 7.64 -52.48 -0.40 0.27 16 45 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 46 H 0.09 0.03 7.90 -51.93 -0.41 -0.38 16 LS Contribution 381.90 15.07 5.76 5.76 Total: 0.00 -10.48 381.90 -11.08 -21.57 By element: Atomic # 1 Polarization: -4.81 SS G_CDS: -6.79 Total: -11.59 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: -3.67 Total: -1.93 kcal Atomic # 7 Polarization: -0.71 SS G_CDS: -0.40 Total: -1.11 kcal Atomic # 8 Polarization: -5.89 SS G_CDS: -0.74 Total: -6.63 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.24 Total: -6.06 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -10.48 -11.08 -21.57 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16488024_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.467 kcal (2) G-P(sol) polarization free energy of solvation -10.485 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.952 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.081 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.566 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.033 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds