Wall clock time and date at job start Sun Mar 7 2021 05:14:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42905 * 113.99741 * 2 1 4 4 H 1.08996 * 112.84579 * 341.19190 * 3 2 1 5 5 C 1.53775 * 113.61522 * 112.50357 * 3 2 1 6 6 C 1.53779 * 87.08045 * 139.98140 * 5 3 2 7 7 H 1.08999 * 113.61746 * 89.11955 * 6 5 3 8 8 C 1.53005 * 113.68852 * 220.00510 * 6 5 3 9 9 C 1.53001 * 109.47247 * 272.53533 * 8 6 5 10 10 N 1.46495 * 109.47168 * 180.02562 * 9 8 6 11 11 C 1.34779 * 120.00255 * 180.02562 * 10 9 8 12 12 O 1.21583 * 119.99597 * 359.97438 * 11 10 9 13 13 C 1.47529 * 120.00055 * 179.97438 * 11 10 9 14 14 C 1.40146 * 120.19345 * 179.71840 * 13 11 10 15 15 O 1.35654 * 120.14341 * 359.97438 * 14 13 11 16 16 C 1.38705 * 119.69982 * 179.79186 * 14 13 11 17 17 C 1.38047 * 120.08787 * 0.48270 * 16 14 13 18 18 C 1.50697 * 119.80668 * 179.76653 * 17 16 14 19 19 O 1.42900 * 109.47220 * 64.98132 * 18 17 16 20 20 Si 1.86307 * 109.47294 * 184.97979 * 18 17 16 21 21 C 1.38552 * 120.38946 * 359.74962 * 17 16 14 22 22 C 1.37784 * 120.30078 * 0.02562 * 21 17 16 23 23 C 1.53779 * 87.08153 * 334.56518 * 6 5 3 24 24 H 1.08993 * 109.47162 * 60.00665 * 1 2 3 25 25 H 1.09001 * 109.46593 * 180.02562 * 1 2 3 26 26 H 1.09002 * 109.47124 * 300.00185 * 1 2 3 27 27 H 1.09007 * 113.61519 * 254.52747 * 5 3 2 28 28 H 1.08996 * 113.61809 * 25.43106 * 5 3 2 29 29 H 1.09001 * 109.46772 * 32.53494 * 8 6 5 30 30 H 1.09001 * 109.46740 * 152.53717 * 8 6 5 31 31 H 1.08993 * 109.46945 * 299.99884 * 9 8 6 32 32 H 1.08997 * 109.46862 * 59.99963 * 9 8 6 33 33 H 0.97005 * 120.00093 * 359.97438 * 10 9 8 34 34 H 0.96704 * 113.99463 * 90.00291 * 15 14 13 35 35 H 1.08007 * 119.95371 * 180.25673 * 16 14 13 36 36 H 1.08999 * 109.47212 * 304.97781 * 18 17 16 37 37 H 0.96707 * 113.99724 * 60.00291 * 19 18 17 38 38 H 1.48507 * 109.99769 * 58.68036 * 20 18 17 39 39 H 1.48492 * 109.99998 * 179.97438 * 20 18 17 40 40 H 1.08000 * 119.84954 * 180.02562 * 21 17 16 41 41 H 1.08001 * 120.04903 * 180.02562 * 22 21 17 42 42 H 1.09003 * 113.61486 * 270.88670 * 23 6 5 43 43 H 1.08993 * 113.61310 * 139.98126 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0788 -0.3238 5 6 2.7534 1.6490 1.3017 6 6 3.8226 2.3183 0.4221 7 1 3.6221 3.3694 0.2148 8 6 5.2549 2.0696 0.8992 9 6 5.6429 3.1355 1.9259 10 7 7.0145 2.8977 2.3822 11 6 7.5729 3.7176 3.2947 12 8 6.9383 4.6548 3.7388 13 6 8.9539 3.4777 3.7547 14 6 9.5406 4.3311 4.6990 15 8 8.8410 5.3825 5.1944 16 6 10.8382 4.0935 5.1275 17 6 11.5509 3.0268 4.6178 18 6 12.9622 2.7776 5.0839 19 8 12.9528 2.4412 6.4727 20 14 13.6990 1.3712 4.1093 21 6 10.9763 2.1836 3.6805 22 6 9.6868 2.4020 3.2470 23 6 3.3755 1.3720 -0.7046 24 1 -0.3633 0.5137 -0.8900 25 1 -0.3632 -1.0277 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 2.2140 2.3478 1.9411 28 1 3.1167 0.7742 1.8410 29 1 5.3188 1.0829 1.3581 30 1 5.9349 2.1196 0.0488 31 1 5.5790 4.1221 1.4671 32 1 4.9628 3.0855 2.7762 33 1 7.5206 2.1498 2.0282 34 1 8.3319 5.1762 5.9902 35 1 11.2928 4.7462 5.8582 36 1 13.5591 3.6769 4.9319 37 1 12.4391 1.6490 6.6820 38 1 13.6854 1.6955 2.6601 39 1 15.0910 1.1159 4.5590 40 1 11.5417 1.3514 3.2879 41 1 9.2427 1.7420 2.5165 42 1 3.9088 0.4214 -0.7138 43 1 3.3383 1.8471 -1.6848 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16488024_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:14:52 Heat of formation + Delta-G solvation = -102.553662 kcal Electronic energy + Delta-G solvation = -24591.152990 eV Core-core repulsion = 20797.149114 eV Total energy + Delta-G solvation = -3794.003875 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -41.61056 -40.66064 -39.83701 -38.44830 -37.52521 -37.16621 -35.83158 -33.19958 -31.42119 -31.12733 -27.96425 -27.45389 -26.77328 -25.43493 -23.96386 -23.31195 -22.63422 -21.55772 -20.57438 -19.47286 -18.69480 -18.21985 -17.64890 -17.34614 -16.80832 -16.73962 -16.49013 -16.28428 -16.04862 -16.00644 -15.73624 -15.54138 -15.28047 -14.89018 -14.70350 -14.33546 -13.87543 -13.72108 -13.51921 -13.45260 -13.24124 -13.07682 -12.93790 -12.47917 -12.36167 -12.32644 -12.17938 -11.83129 -11.69082 -11.58429 -11.34463 -10.80268 -10.54531 -10.43538 -10.20099 -10.03898 -9.80059 -5.14299 -0.41858 0.08467 1.15573 1.53547 1.77664 1.88790 2.07687 2.58586 2.83344 3.08317 3.35165 3.38179 3.41508 3.52986 3.60520 3.70340 3.73902 3.79030 3.94391 4.00672 4.16631 4.21125 4.21322 4.30552 4.37353 4.44408 4.50705 4.53877 4.58517 4.67798 4.74241 4.76192 4.77912 4.87854 4.92780 4.94283 5.01906 5.11535 5.17112 5.17908 5.33279 5.39003 5.51211 6.25961 6.43644 6.44735 6.70407 7.22816 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.378 6.378 3 C 0.058 3.942 4 H 0.087 0.913 5 C -0.152 4.152 6 C -0.107 4.107 7 H 0.096 0.904 8 C -0.119 4.119 9 C 0.120 3.880 10 N -0.730 5.730 11 C 0.557 3.443 12 O -0.518 6.518 13 C -0.164 4.164 14 C 0.173 3.827 15 O -0.476 6.476 16 C -0.129 4.129 17 C -0.077 4.077 18 C -0.074 4.074 19 O -0.536 6.536 20 Si 0.691 3.309 21 C -0.134 4.134 22 C -0.065 4.065 23 C -0.131 4.131 24 H 0.042 0.958 25 H 0.086 0.914 26 H 0.042 0.958 27 H 0.070 0.930 28 H 0.091 0.909 29 H 0.073 0.927 30 H 0.073 0.927 31 H 0.069 0.931 32 H 0.070 0.930 33 H 0.399 0.601 34 H 0.398 0.602 35 H 0.140 0.860 36 H 0.118 0.882 37 H 0.380 0.620 38 H -0.256 1.256 39 H -0.253 1.253 40 H 0.136 0.864 41 H 0.134 0.866 42 H 0.092 0.908 43 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.299 -5.463 -1.344 5.774 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.297 6.297 3 C 0.000 4.000 4 H 0.105 0.895 5 C -0.190 4.190 6 C -0.126 4.126 7 H 0.115 0.885 8 C -0.157 4.157 9 C -0.003 4.003 10 N -0.383 5.383 11 C 0.344 3.656 12 O -0.394 6.394 13 C -0.168 4.168 14 C 0.126 3.874 15 O -0.288 6.288 16 C -0.147 4.147 17 C -0.078 4.078 18 C -0.185 4.185 19 O -0.342 6.342 20 Si 0.592 3.408 21 C -0.152 4.152 22 C -0.084 4.084 23 C -0.169 4.169 24 H 0.060 0.940 25 H 0.104 0.896 26 H 0.060 0.940 27 H 0.089 0.911 28 H 0.110 0.890 29 H 0.092 0.908 30 H 0.092 0.908 31 H 0.087 0.913 32 H 0.089 0.911 33 H 0.234 0.766 34 H 0.257 0.743 35 H 0.158 0.842 36 H 0.135 0.865 37 H 0.228 0.772 38 H -0.180 1.180 39 H -0.178 1.178 40 H 0.153 0.847 41 H 0.152 0.848 42 H 0.111 0.889 43 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -0.435 -4.351 -2.005 4.811 hybrid contribution -0.350 0.328 0.211 0.524 sum -0.785 -4.024 -1.794 4.475 Atomic orbital electron populations 1.22808 0.81004 1.02945 1.00005 1.87948 1.19804 1.27347 1.94593 1.23725 0.93950 0.85380 0.96904 0.89478 1.23613 0.97349 1.00921 0.97083 1.22229 0.93636 0.99637 0.97077 0.88534 1.21745 0.96432 0.98942 0.98535 1.21389 0.81967 0.99202 0.97715 1.45930 1.16130 1.32055 1.44180 1.18036 0.85869 0.82299 0.79368 1.90838 1.63193 1.29324 1.56074 1.20439 0.95178 0.98171 1.02990 1.18519 0.90490 0.85705 0.92684 1.84763 1.64502 1.31573 1.47934 1.21349 0.94099 0.98038 1.01259 1.20443 0.96651 0.94837 0.95824 1.25189 0.95579 1.08813 0.88890 1.86542 1.75428 1.50263 1.21948 0.94777 0.82527 0.84998 0.78485 1.20926 0.95610 1.00020 0.98641 1.21153 0.93890 0.95451 0.97907 1.23281 0.95405 1.00264 0.97952 0.93950 0.89574 0.93963 0.91114 0.89010 0.90791 0.90815 0.91252 0.91146 0.76584 0.74315 0.84211 0.86485 0.77238 1.18040 1.17762 0.84661 0.84790 0.88921 0.90801 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.66 10.71 -35.23 -0.38 -1.04 16 3 C 0.06 -0.02 4.31 -25.92 -0.11 -0.13 16 4 H 0.09 -0.11 7.87 -51.93 -0.41 -0.52 16 5 C -0.15 0.16 7.47 -25.92 -0.19 -0.04 16 6 C -0.11 0.22 3.65 -89.81 -0.33 -0.11 16 7 H 0.10 -0.22 8.13 -51.93 -0.42 -0.64 16 8 C -0.12 0.32 5.17 -26.73 -0.14 0.18 16 9 C 0.12 -0.08 5.66 -4.04 -0.02 -0.10 16 10 N -0.73 0.41 5.51 -61.36 -0.34 0.07 16 11 C 0.56 1.47 7.76 -12.47 -0.10 1.38 16 12 O -0.52 -3.35 15.16 -16.59 -0.25 -3.60 16 13 C -0.16 -0.19 5.89 -104.84 -0.62 -0.81 16 14 C 0.17 0.34 6.72 -38.69 -0.26 0.08 16 15 O -0.48 -1.43 11.58 -40.54 -0.47 -1.90 16 16 C -0.13 -0.09 9.60 -39.48 -0.38 -0.47 16 17 C -0.08 0.06 5.35 -104.58 -0.56 -0.50 16 18 C -0.07 0.09 2.79 36.00 0.10 0.19 16 19 O -0.54 0.41 12.83 -35.23 -0.45 -0.04 16 20 Si 0.69 -1.54 29.78 -169.99 -5.06 -6.60 16 21 C -0.13 0.28 8.64 -39.63 -0.34 -0.07 16 22 C -0.07 0.11 9.54 -39.20 -0.37 -0.26 16 23 C -0.13 0.17 7.47 -25.92 -0.19 -0.03 16 24 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 25 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 26 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 27 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.09 -0.04 7.90 -51.93 -0.41 -0.45 16 29 H 0.07 -0.22 7.85 -51.93 -0.41 -0.62 16 30 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 31 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 32 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 33 H 0.40 -1.37 6.50 -40.82 -0.27 -1.63 16 34 H 0.40 -0.31 9.06 45.56 0.41 0.11 16 35 H 0.14 0.06 8.06 -52.48 -0.42 -0.36 16 36 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 37 H 0.38 -1.83 8.70 45.56 0.40 -1.44 16 38 H -0.26 -0.02 7.11 56.52 0.40 0.38 16 39 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 40 H 0.14 -0.60 4.88 -52.49 -0.26 -0.86 16 41 H 0.13 -0.64 6.40 -52.49 -0.34 -0.98 16 42 H 0.09 -0.08 8.10 -51.93 -0.42 -0.50 16 43 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 LS Contribution 357.20 15.07 5.38 5.38 Total: 0.00 -9.72 357.20 -9.52 -19.24 By element: Atomic # 1 Polarization: -6.38 SS G_CDS: -5.53 Total: -11.91 kcal Atomic # 6 Polarization: 2.82 SS G_CDS: -2.42 Total: 0.40 kcal Atomic # 7 Polarization: 0.41 SS G_CDS: -0.34 Total: 0.07 kcal Atomic # 8 Polarization: -5.03 SS G_CDS: -1.55 Total: -6.58 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: -5.06 Total: -6.60 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -9.72 -9.52 -19.24 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16488024_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.311 kcal (2) G-P(sol) polarization free energy of solvation -9.722 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.521 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.243 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.554 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds