Wall clock time and date at job start Sun Mar 7 2021 05:15:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42887 * 1 3 3 C 1.42902 * 113.99899 * 2 1 4 4 H 1.08995 * 112.84975 * 18.80598 * 3 2 1 5 5 C 1.53787 * 113.61602 * 149.99904 * 3 2 1 6 6 C 1.53783 * 87.08033 * 139.98010 * 5 3 2 7 7 H 1.08998 * 113.60890 * 89.20615 * 6 5 3 8 8 C 1.53000 * 113.61092 * 220.01630 * 6 5 3 9 9 C 1.53008 * 109.46587 * 185.00211 * 8 6 5 10 10 N 1.46501 * 109.46912 * 180.02562 * 9 8 6 11 11 C 1.34773 * 119.99897 * 180.02562 * 10 9 8 12 12 O 1.21653 * 120.00360 * 359.97438 * 11 10 9 13 13 C 1.47046 * 119.99942 * 179.97438 * 11 10 9 14 14 C 1.36222 * 123.49447 * 179.97438 * 13 11 10 15 15 Cl 1.73599 * 124.60550 * 0.03322 * 14 13 11 16 16 S 1.70446 * 110.79233 * 180.02562 * 14 13 11 17 17 C 1.75490 * 92.46461 * 359.97438 * 16 14 13 18 18 C 1.50706 * 124.68715 * 180.02562 * 17 16 14 19 19 O 1.42895 * 109.46938 * 120.02431 * 18 17 16 20 20 Si 1.86299 * 109.46748 * 0.02596 * 18 17 16 21 21 C 1.32695 * 110.63069 * 0.27047 * 17 16 14 22 22 C 1.53782 * 87.08372 * 334.56923 * 6 5 3 23 23 H 1.09004 * 109.47397 * 60.00254 * 1 2 3 24 24 H 1.09000 * 109.47344 * 179.97438 * 1 2 3 25 25 H 1.09008 * 109.47599 * 299.99942 * 1 2 3 26 26 H 1.09007 * 113.61343 * 25.43473 * 5 3 2 27 27 H 1.08997 * 113.69019 * 254.54436 * 5 3 2 28 28 H 1.09004 * 109.47092 * 65.01123 * 8 6 5 29 29 H 1.08996 * 109.47718 * 305.00238 * 8 6 5 30 30 H 1.08997 * 109.47295 * 60.00568 * 9 8 6 31 31 H 1.08996 * 109.47113 * 300.00397 * 9 8 6 32 32 H 0.97003 * 120.00037 * 359.97438 * 10 9 8 33 33 H 1.09000 * 109.47161 * 240.02697 * 18 17 16 34 34 H 0.96709 * 113.99981 * 180.02562 * 19 18 17 35 35 H 1.48498 * 110.00336 * 298.68292 * 20 18 17 36 36 H 1.48504 * 109.99873 * 60.00145 * 20 18 17 37 37 H 1.08004 * 123.45173 * 179.69923 * 21 17 16 38 38 H 1.08997 * 113.61416 * 139.97730 * 22 6 5 39 39 H 1.08998 * 113.60855 * 270.88641 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 1 1.3136 2.0788 0.3238 5 6 3.3754 1.3720 0.7046 6 6 3.8226 2.3182 -0.4222 7 1 3.6234 3.3695 -0.2142 8 6 5.2542 2.0681 -0.9006 9 6 5.6424 3.1341 -1.9272 10 7 7.0130 2.8943 -2.3857 11 6 7.5716 3.7143 -3.2978 12 8 6.9376 4.6534 -3.7406 13 6 8.9475 3.4740 -3.7576 14 6 9.5808 4.2562 -4.6756 15 17 8.8758 5.6458 -5.4409 16 16 11.1594 3.6854 -4.9707 17 6 10.9744 2.3607 -3.8346 18 6 12.0386 1.3385 -3.5283 19 8 12.3642 1.3920 -2.1380 20 14 13.5610 1.7057 -4.5373 21 6 9.7661 2.3803 -3.2864 22 6 2.7533 1.6489 -1.3018 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3634 -1.0277 -0.0005 25 1 -0.3634 0.5138 0.8900 26 1 3.9088 0.4214 0.7138 27 1 3.3396 1.8468 1.6850 28 1 5.3166 1.0815 -1.3599 29 1 5.9351 2.1170 -0.0508 30 1 5.5800 4.1206 -1.4680 31 1 4.9615 3.0852 -2.7769 32 1 7.5186 2.1457 -2.0324 33 1 11.6691 0.3437 -3.7769 34 1 13.0447 0.7598 -1.8687 35 1 13.2430 1.6221 -5.9854 36 1 14.0746 3.0595 -4.2075 37 1 9.4298 1.6545 -2.5607 38 1 2.2139 2.3477 -1.9411 39 1 3.1166 0.7741 -1.8409 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16488024_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:15:08 Heat of formation + Delta-G solvation = -58.461012 kcal Electronic energy + Delta-G solvation = -23097.088360 eV Core-core repulsion = 19353.031131 eV Total energy + Delta-G solvation = -3744.057228 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.068 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.01000 -40.48863 -38.86182 -37.93785 -37.51018 -37.04413 -35.84726 -32.10366 -31.52311 -27.85476 -27.02945 -26.78760 -26.37902 -24.38940 -22.60624 -22.01923 -20.82342 -20.39321 -19.22315 -18.60503 -17.97127 -17.63969 -16.91522 -16.72251 -16.59707 -16.28191 -16.05173 -15.69268 -15.64375 -15.17844 -14.96767 -14.54904 -14.44315 -14.22567 -14.14216 -13.69607 -13.42704 -13.42372 -13.03852 -13.01794 -12.48125 -12.43735 -12.41936 -12.32749 -12.19631 -11.93497 -11.80432 -11.54896 -11.31432 -10.75616 -10.60207 -10.41393 -10.09631 -9.85851 -9.65958 -5.41604 -0.57964 -0.15292 0.44308 0.71236 1.00655 1.11469 1.42944 1.73782 2.20764 2.32324 2.85693 3.07506 3.41559 3.48248 3.55874 3.75807 3.81566 3.85560 3.88646 4.02707 4.14359 4.19942 4.24884 4.38897 4.42386 4.46098 4.53845 4.61581 4.69046 4.76101 4.78888 4.80549 4.90524 4.91811 4.98059 5.06732 5.19747 5.36243 5.42960 6.28131 6.37421 6.47746 7.24256 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.378 6.378 3 C 0.058 3.942 4 H 0.087 0.913 5 C -0.131 4.131 6 C -0.106 4.106 7 H 0.097 0.903 8 C -0.119 4.119 9 C 0.121 3.879 10 N -0.725 5.725 11 C 0.576 3.424 12 O -0.518 6.518 13 C -0.158 4.158 14 C -0.111 4.111 15 Cl 0.027 6.973 16 S 0.214 5.786 17 C -0.190 4.190 18 C -0.034 4.034 19 O -0.542 6.542 20 Si 0.670 3.330 21 C -0.066 4.066 22 C -0.152 4.152 23 H 0.042 0.958 24 H 0.086 0.914 25 H 0.042 0.958 26 H 0.092 0.908 27 H 0.073 0.927 28 H 0.073 0.927 29 H 0.074 0.926 30 H 0.070 0.930 31 H 0.071 0.929 32 H 0.400 0.600 33 H 0.089 0.911 34 H 0.387 0.613 35 H -0.235 1.235 36 H -0.232 1.232 37 H 0.159 0.841 38 H 0.070 0.930 39 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.279 -5.828 2.270 7.062 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.297 6.297 3 C 0.001 3.999 4 H 0.105 0.895 5 C -0.169 4.169 6 C -0.125 4.125 7 H 0.115 0.885 8 C -0.157 4.157 9 C -0.002 4.002 10 N -0.377 5.377 11 C 0.361 3.639 12 O -0.395 6.395 13 C -0.177 4.177 14 C -0.258 4.258 15 Cl 0.056 6.944 16 S 0.478 5.522 17 C -0.307 4.307 18 C -0.147 4.147 19 O -0.349 6.349 20 Si 0.568 3.432 21 C -0.095 4.095 22 C -0.190 4.190 23 H 0.060 0.940 24 H 0.104 0.896 25 H 0.060 0.940 26 H 0.111 0.889 27 H 0.092 0.908 28 H 0.092 0.908 29 H 0.092 0.908 30 H 0.088 0.912 31 H 0.089 0.911 32 H 0.235 0.765 33 H 0.107 0.893 34 H 0.236 0.764 35 H -0.158 1.158 36 H -0.155 1.155 37 H 0.176 0.824 38 H 0.089 0.911 39 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 3.922 -3.682 0.324 5.389 hybrid contribution -1.774 -0.472 1.146 2.164 sum 2.148 -4.153 1.470 4.902 Atomic orbital electron populations 1.22805 0.81029 1.02929 0.99995 1.87945 1.19784 1.27363 1.94590 1.23728 0.93946 0.85361 0.96911 0.89482 1.23281 0.95382 1.00277 0.97944 1.22227 0.93640 0.99626 0.97051 0.88522 1.21746 0.96420 0.98942 0.98547 1.21402 0.81886 0.99216 0.97705 1.45822 1.16180 1.31856 1.43862 1.17356 0.84835 0.82443 0.79278 1.90879 1.62913 1.29483 1.56205 1.20230 0.96899 0.98451 1.02120 1.25551 1.00787 0.97518 1.01908 1.98436 1.82376 1.35525 1.78042 1.83423 1.07695 1.20646 1.40462 1.23382 0.99084 1.02516 1.05700 1.23960 1.02786 0.98101 0.89841 1.86503 1.62601 1.63891 1.21889 0.94683 0.82674 0.86124 0.79689 1.20983 0.91754 0.97213 0.99569 1.23616 0.97361 1.00927 0.97078 0.93979 0.89587 0.93955 0.88936 0.90792 0.90811 0.90769 0.91174 0.91104 0.76499 0.89318 0.76443 1.15849 1.15498 0.82357 0.91121 0.89020 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.85 101.05 1.10 1.09 16 2 O -0.38 -0.81 10.71 -35.23 -0.38 -1.19 16 3 C 0.06 0.01 4.31 -25.91 -0.11 -0.10 16 4 H 0.09 -0.08 7.87 -51.93 -0.41 -0.49 16 5 C -0.13 0.11 7.47 -25.91 -0.19 -0.09 16 6 C -0.11 0.16 3.65 -89.81 -0.33 -0.17 16 7 H 0.10 -0.17 8.13 -51.93 -0.42 -0.59 16 8 C -0.12 0.23 5.17 -26.73 -0.14 0.09 16 9 C 0.12 0.01 5.67 -4.04 -0.02 -0.01 16 10 N -0.72 -0.43 5.53 -61.50 -0.34 -0.77 16 11 C 0.58 2.27 7.79 -12.69 -0.10 2.17 16 12 O -0.52 -3.78 14.91 5.23 0.08 -3.71 16 13 C -0.16 -0.48 5.98 -104.58 -0.63 -1.11 16 14 C -0.11 -0.41 6.87 30.01 0.21 -0.21 16 15 Cl 0.03 0.13 27.20 -51.86 -1.41 -1.28 16 16 S 0.21 0.40 20.17 -107.50 -2.17 -1.76 16 17 C -0.19 -0.14 5.71 -36.19 -0.21 -0.34 16 18 C -0.03 0.07 2.94 36.01 0.11 0.18 16 19 O -0.54 1.10 12.83 -35.23 -0.45 0.65 16 20 Si 0.67 -1.72 30.90 -169.99 -5.25 -6.98 16 21 C -0.07 -0.04 9.71 -39.00 -0.38 -0.42 16 22 C -0.15 0.07 7.46 -25.92 -0.19 -0.12 16 23 H 0.04 -0.03 8.14 -51.93 -0.42 -0.46 16 24 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 25 H 0.04 -0.04 8.14 -51.92 -0.42 -0.47 16 26 H 0.09 -0.03 8.10 -51.93 -0.42 -0.45 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.07 -0.16 7.84 -51.93 -0.41 -0.56 16 29 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 30 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 31 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 32 H 0.40 -0.81 7.02 -40.82 -0.29 -1.10 16 33 H 0.09 -0.37 7.96 -51.93 -0.41 -0.79 16 34 H 0.39 -2.72 8.74 45.56 0.40 -2.32 16 35 H -0.23 0.10 7.11 56.52 0.40 0.51 16 36 H -0.23 -0.12 7.11 56.52 0.40 0.28 16 37 H 0.16 -0.32 7.10 -52.48 -0.37 -0.70 16 38 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 39 H 0.09 0.01 7.90 -51.93 -0.41 -0.40 16 LS Contribution 355.84 15.07 5.36 5.36 Total: 0.00 -8.27 355.84 -10.77 -19.05 By element: Atomic # 1 Polarization: -5.01 SS G_CDS: -5.32 Total: -10.34 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: -0.89 Total: 0.97 kcal Atomic # 7 Polarization: -0.43 SS G_CDS: -0.34 Total: -0.77 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.75 Total: -4.24 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.25 Total: -6.98 kcal Atomic # 16 Polarization: 0.40 SS G_CDS: -2.17 Total: -1.76 kcal Atomic # 17 Polarization: 0.13 SS G_CDS: -1.41 Total: -1.28 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -8.27 -10.77 -19.05 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16488024_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.416 kcal (2) G-P(sol) polarization free energy of solvation -8.272 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.773 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.045 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.461 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds