Wall clock time and date at job start Sun Mar 7 2021 05:16:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42899 * 113.99778 * 2 1 4 4 H 1.08995 * 112.84990 * 341.19195 * 3 2 1 5 5 C 1.53778 * 113.61691 * 112.50136 * 3 2 1 6 6 C 1.53780 * 87.08421 * 139.97596 * 5 3 2 7 7 H 1.08999 * 113.60911 * 89.11584 * 6 5 3 8 8 C 1.52993 * 113.61595 * 220.01793 * 6 5 3 9 9 C 1.53006 * 109.47407 * 272.49654 * 8 6 5 10 10 N 1.46500 * 109.47233 * 180.02562 * 9 8 6 11 11 C 1.34773 * 119.99769 * 180.02562 * 10 9 8 12 12 O 1.21276 * 119.99878 * 359.97438 * 11 10 9 13 13 C 1.50701 * 119.99720 * 180.02562 * 11 10 9 14 14 F 1.39904 * 109.46903 * 299.99738 * 13 11 10 15 15 F 1.39898 * 109.47416 * 59.99673 * 13 11 10 16 16 O 1.42901 * 109.47070 * 179.97438 * 13 11 10 17 17 C 1.35903 * 117.00023 * 179.97438 * 16 13 11 18 18 C 1.38729 * 120.05269 * 359.72668 * 17 16 13 19 19 C 1.38150 * 119.94127 * 179.74548 * 18 17 16 20 20 C 1.38271 * 120.05193 * 0.50663 * 19 18 17 21 21 C 1.50705 * 119.94270 * 179.74615 * 20 19 18 22 22 O 1.42894 * 109.46942 * 245.02541 * 21 20 19 23 23 Si 1.86305 * 109.47025 * 5.02381 * 21 20 19 24 24 C 1.38262 * 120.11584 * 359.76923 * 20 19 18 25 25 C 1.38155 * 120.05280 * 359.97438 * 24 20 19 26 26 C 1.53783 * 113.61104 * 209.99900 * 3 2 1 27 27 H 1.09001 * 109.46558 * 60.00281 * 1 2 3 28 28 H 1.09001 * 109.47103 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47187 * 300.00233 * 1 2 3 30 30 H 1.09003 * 113.61548 * 254.53075 * 5 3 2 31 31 H 1.09011 * 113.61419 * 25.43051 * 5 3 2 32 32 H 1.08994 * 109.47417 * 32.50216 * 8 6 5 33 33 H 1.08999 * 109.46972 * 152.50001 * 8 6 5 34 34 H 1.08998 * 109.46838 * 300.00477 * 9 8 6 35 35 H 1.08999 * 109.46771 * 60.00224 * 9 8 6 36 36 H 0.96998 * 119.99652 * 0.02562 * 10 9 8 37 37 H 1.07996 * 120.03108 * 359.97438 * 18 17 16 38 38 H 1.07996 * 119.97532 * 180.23465 * 19 18 17 39 39 H 1.08990 * 109.46922 * 125.02268 * 21 20 19 40 40 H 0.96703 * 113.99961 * 180.02562 * 22 21 20 41 41 H 1.48498 * 109.99850 * 300.00132 * 23 21 20 42 42 H 1.48500 * 109.99994 * 61.31528 * 23 21 20 43 43 H 1.07993 * 119.97511 * 179.97438 * 24 20 19 44 44 H 1.08001 * 120.02445 * 179.97438 * 25 24 20 45 45 H 1.08998 * 113.61221 * 334.56248 * 26 3 2 46 46 H 1.08998 * 113.61591 * 105.38742 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0788 -0.3238 5 6 2.7534 1.6490 1.3017 6 6 3.8227 2.3182 0.4222 7 1 3.6222 3.3693 0.2149 8 6 5.2542 2.0680 0.9007 9 6 5.6425 3.1341 1.9273 10 7 7.0134 2.8949 2.3850 11 6 7.5718 3.7146 3.2976 12 8 6.9395 4.6503 3.7395 13 6 8.9823 3.4689 3.7681 14 9 9.0635 2.2023 4.3567 15 9 9.8556 3.5329 2.6770 16 8 9.3448 4.4644 4.7269 17 6 10.5946 4.3863 5.2550 18 6 11.4523 3.3690 4.8626 19 6 12.7241 3.2948 5.3969 20 6 13.1387 4.2274 6.3299 21 6 14.5246 4.1408 6.9154 22 8 14.4341 3.8647 8.3145 23 14 15.4706 2.7748 6.0727 24 6 12.2838 5.2389 6.7268 25 6 11.0128 5.3205 6.1915 26 6 3.3756 1.3719 -0.7045 27 1 -0.3632 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5139 0.8900 30 1 2.2140 2.3478 1.9411 31 1 3.1166 0.7741 1.8411 32 1 5.3167 1.0816 1.3600 33 1 5.9351 2.1170 0.0510 34 1 5.5800 4.1206 1.4680 35 1 4.9616 3.0852 2.7771 36 1 7.5192 2.1467 2.0313 37 1 11.1273 2.6377 4.1373 38 1 13.3935 2.5053 5.0890 39 1 15.0425 5.0879 6.7647 40 1 15.2907 3.7956 8.7580 41 1 14.7746 1.4780 6.2708 42 1 15.5990 3.0658 4.6222 43 1 12.6098 5.9658 7.4559 44 1 10.3452 6.1106 6.5022 45 1 3.9088 0.4213 -0.7136 46 1 3.3382 1.8457 -1.6854 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16488024_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:16:15 Heat of formation + Delta-G solvation = -187.339696 kcal Electronic energy + Delta-G solvation = -31429.525579 eV Core-core repulsion = 26537.399535 eV Total energy + Delta-G solvation = -4892.126044 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.147 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -50.80420 -48.78131 -41.35847 -41.07746 -40.54695 -39.15061 -37.69428 -37.29422 -36.29481 -32.54685 -32.28426 -31.98477 -29.05618 -27.74920 -26.85682 -26.36803 -25.43545 -24.32866 -22.86833 -22.61459 -22.20168 -20.76137 -20.45876 -19.80893 -19.60174 -18.44072 -18.07439 -17.69825 -17.33795 -17.01228 -16.92275 -16.65729 -16.45142 -16.25097 -16.10516 -15.90662 -15.66142 -15.59687 -15.33212 -15.22576 -15.03122 -14.92547 -14.73527 -14.44184 -14.24172 -13.88325 -13.84245 -13.65141 -13.63590 -13.50749 -13.21115 -13.06770 -12.61233 -12.46675 -12.43411 -12.06769 -11.95303 -11.90949 -11.76553 -11.47076 -11.34431 -10.58056 -10.47452 -10.36781 -10.14841 -9.50777 -5.01409 0.07729 0.18572 0.53110 0.74815 1.23965 1.60460 1.77855 1.93164 2.05848 2.47249 2.72959 2.83296 3.27080 3.30639 3.34808 3.44492 3.54584 3.64305 3.68169 3.71691 3.85395 3.86668 4.02344 4.06302 4.08640 4.19062 4.29897 4.31098 4.39920 4.41487 4.43323 4.50968 4.65784 4.68436 4.72829 4.75232 4.76699 4.80292 4.89138 4.93696 4.96027 5.07232 5.09279 5.25909 5.37648 5.40945 5.77898 5.88817 6.22439 6.42472 6.58797 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.378 6.378 3 C 0.059 3.941 4 H 0.088 0.912 5 C -0.154 4.154 6 C -0.107 4.107 7 H 0.098 0.902 8 C -0.120 4.120 9 C 0.118 3.882 10 N -0.704 5.704 11 C 0.515 3.485 12 O -0.468 6.468 13 C 0.431 3.569 14 F -0.175 7.175 15 F -0.175 7.175 16 O -0.285 6.285 17 C 0.107 3.893 18 C -0.185 4.185 19 C -0.084 4.084 20 C -0.097 4.097 21 C -0.068 4.068 22 O -0.545 6.545 23 Si 0.681 3.319 24 C -0.053 4.053 25 C -0.124 4.124 26 C -0.131 4.131 27 H 0.042 0.958 28 H 0.086 0.914 29 H 0.042 0.958 30 H 0.071 0.929 31 H 0.092 0.908 32 H 0.077 0.923 33 H 0.077 0.923 34 H 0.080 0.920 35 H 0.080 0.920 36 H 0.410 0.590 37 H 0.136 0.864 38 H 0.126 0.874 39 H 0.076 0.924 40 H 0.383 0.617 41 H -0.250 1.250 42 H -0.254 1.254 43 H 0.142 0.858 44 H 0.144 0.856 45 H 0.093 0.907 46 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.731 -0.791 -1.937 2.715 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.297 6.297 3 C 0.001 3.999 4 H 0.106 0.894 5 C -0.191 4.191 6 C -0.126 4.126 7 H 0.117 0.883 8 C -0.158 4.158 9 C -0.004 4.004 10 N -0.358 5.358 11 C 0.293 3.707 12 O -0.338 6.338 13 C 0.353 3.647 14 F -0.156 7.156 15 F -0.157 7.157 16 O -0.201 6.201 17 C 0.064 3.936 18 C -0.203 4.203 19 C -0.101 4.101 20 C -0.098 4.098 21 C -0.179 4.179 22 O -0.352 6.352 23 Si 0.583 3.417 24 C -0.071 4.071 25 C -0.143 4.143 26 C -0.169 4.169 27 H 0.061 0.939 28 H 0.105 0.895 29 H 0.061 0.939 30 H 0.090 0.910 31 H 0.111 0.889 32 H 0.096 0.904 33 H 0.096 0.904 34 H 0.098 0.902 35 H 0.098 0.902 36 H 0.246 0.754 37 H 0.153 0.847 38 H 0.143 0.857 39 H 0.094 0.906 40 H 0.231 0.769 41 H -0.175 1.175 42 H -0.179 1.179 43 H 0.160 0.840 44 H 0.161 0.839 45 H 0.111 0.889 46 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 0.564 -0.769 -2.342 2.529 hybrid contribution -0.161 -0.110 -0.335 0.388 sum 0.402 -0.879 -2.677 2.846 Atomic orbital electron populations 1.22815 0.80939 1.02994 1.00022 1.87951 1.19861 1.27277 1.94580 1.23714 0.93960 0.85467 0.96804 0.89407 1.23639 0.97334 1.00986 0.97157 1.22225 0.93268 0.99813 0.97269 0.88349 1.21774 0.96825 0.98803 0.98419 1.21654 0.80160 1.00146 0.98436 1.45830 1.16964 1.31043 1.41966 1.19272 0.85272 0.84536 0.81629 1.90877 1.60519 1.28250 1.54179 1.21872 0.89058 0.75912 0.77860 1.93196 1.96658 1.41588 1.84186 1.93191 1.71783 1.95681 1.55022 1.86670 1.30985 1.48347 1.54122 1.18949 0.82703 0.96431 0.95519 1.21410 0.95180 0.99641 1.04080 1.20681 0.95222 0.97629 0.96581 1.19367 0.95582 0.96615 0.98208 1.24624 0.97562 1.08246 0.87479 1.86497 1.34835 1.94581 1.19249 0.95322 0.87690 0.78190 0.80541 1.20886 0.91601 0.97254 0.97332 1.20547 0.97179 0.99431 0.97113 1.23281 0.95428 1.00248 0.97916 0.93925 0.89542 0.93933 0.91007 0.88935 0.90422 0.90402 0.90213 0.90155 0.75429 0.84653 0.85703 0.90563 0.76929 1.17500 1.17884 0.84045 0.83867 0.88867 0.90681 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.61 10.71 -35.23 -0.38 -0.99 16 3 C 0.06 -0.04 4.31 -25.92 -0.11 -0.15 16 4 H 0.09 -0.15 7.87 -51.93 -0.41 -0.55 16 5 C -0.15 0.23 7.46 -25.92 -0.19 0.03 16 6 C -0.11 0.29 3.65 -89.81 -0.33 -0.04 16 7 H 0.10 -0.32 8.13 -51.93 -0.42 -0.74 16 8 C -0.12 0.40 5.17 -26.73 -0.14 0.27 16 9 C 0.12 -0.21 5.67 -4.04 -0.02 -0.24 16 10 N -0.70 0.66 5.56 -60.29 -0.33 0.32 16 11 C 0.52 1.31 7.34 -10.99 -0.08 1.23 16 12 O -0.47 -2.71 16.50 -14.35 -0.24 -2.95 16 13 C 0.43 1.22 2.05 36.01 0.07 1.29 16 14 F -0.17 -0.42 15.27 2.25 0.03 -0.38 16 15 F -0.18 -0.38 15.31 2.25 0.03 -0.34 16 16 O -0.28 -1.36 9.60 -39.34 -0.38 -1.74 16 17 C 0.11 0.46 6.48 -39.22 -0.25 0.20 16 18 C -0.18 -0.69 8.26 -39.43 -0.33 -1.02 16 19 C -0.08 -0.28 8.66 -39.60 -0.34 -0.62 16 20 C -0.10 -0.26 5.39 -104.60 -0.56 -0.83 16 21 C -0.07 0.00 2.79 36.01 0.10 0.10 16 22 O -0.55 -0.12 12.81 -35.23 -0.45 -0.57 16 23 Si 0.68 -0.60 29.85 -169.99 -5.07 -5.67 16 24 C -0.05 -0.12 9.68 -39.60 -0.38 -0.50 16 25 C -0.12 -0.36 9.99 -39.43 -0.39 -0.76 16 26 C -0.13 0.22 7.47 -25.92 -0.19 0.02 16 27 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 28 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 30 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 31 H 0.09 -0.07 7.90 -51.92 -0.41 -0.48 16 32 H 0.08 -0.26 7.84 -51.93 -0.41 -0.67 16 33 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 34 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 35 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 36 H 0.41 -1.35 8.47 -40.82 -0.35 -1.69 16 37 H 0.14 0.38 5.10 -52.49 -0.27 0.11 16 38 H 0.13 0.31 4.86 -52.49 -0.26 0.05 16 39 H 0.08 -0.14 7.96 -51.93 -0.41 -0.55 16 40 H 0.38 -1.87 8.74 45.56 0.40 -1.47 16 41 H -0.25 -0.58 7.05 56.52 0.40 -0.18 16 42 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 43 H 0.14 0.03 8.06 -52.49 -0.42 -0.40 16 44 H 0.14 0.18 8.06 -52.49 -0.42 -0.24 16 45 H 0.09 -0.10 8.10 -51.93 -0.42 -0.52 16 46 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 LS Contribution 391.20 15.07 5.90 5.90 Total: 0.00 -8.78 391.20 -9.33 -18.11 By element: Atomic # 1 Polarization: -5.37 SS G_CDS: -6.38 Total: -11.75 kcal Atomic # 6 Polarization: 2.14 SS G_CDS: -2.06 Total: 0.08 kcal Atomic # 7 Polarization: 0.66 SS G_CDS: -0.33 Total: 0.32 kcal Atomic # 8 Polarization: -4.80 SS G_CDS: -1.44 Total: -6.25 kcal Atomic # 9 Polarization: -0.80 SS G_CDS: 0.07 Total: -0.73 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -5.07 Total: -5.67 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -8.78 -9.33 -18.11 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16488024_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -169.234 kcal (2) G-P(sol) polarization free energy of solvation -8.776 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -178.010 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.330 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.106 kcal (6) G-S(sol) free energy of system = (1) + (5) -187.340 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds