Wall clock time and date at job start Sun Mar 7 2021 05:16:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42899 * 113.99778 * 2 1 4 4 H 1.08995 * 112.84990 * 341.19195 * 3 2 1 5 5 C 1.53778 * 113.61691 * 112.50136 * 3 2 1 6 6 C 1.53780 * 87.08421 * 139.97596 * 5 3 2 7 7 H 1.08999 * 113.60911 * 89.11584 * 6 5 3 8 8 C 1.52993 * 113.61595 * 220.01793 * 6 5 3 9 9 C 1.53006 * 109.47407 * 272.49654 * 8 6 5 10 10 N 1.46500 * 109.47233 * 180.02562 * 9 8 6 11 11 C 1.34773 * 119.99769 * 180.02562 * 10 9 8 12 12 O 1.21276 * 119.99878 * 359.97438 * 11 10 9 13 13 C 1.50701 * 119.99720 * 180.02562 * 11 10 9 14 14 F 1.39904 * 109.46903 * 299.99738 * 13 11 10 15 15 F 1.39898 * 109.47416 * 59.99673 * 13 11 10 16 16 O 1.42901 * 109.47070 * 179.97438 * 13 11 10 17 17 C 1.35903 * 117.00023 * 179.97438 * 16 13 11 18 18 C 1.38729 * 120.05269 * 359.72668 * 17 16 13 19 19 C 1.38150 * 119.94127 * 179.74548 * 18 17 16 20 20 C 1.38271 * 120.05193 * 0.50663 * 19 18 17 21 21 C 1.50705 * 119.94270 * 179.74615 * 20 19 18 22 22 O 1.42894 * 109.46942 * 245.02541 * 21 20 19 23 23 Si 1.86305 * 109.47025 * 5.02381 * 21 20 19 24 24 C 1.38262 * 120.11584 * 359.76923 * 20 19 18 25 25 C 1.38155 * 120.05280 * 359.97438 * 24 20 19 26 26 C 1.53783 * 113.61104 * 209.99900 * 3 2 1 27 27 H 1.09001 * 109.46558 * 60.00281 * 1 2 3 28 28 H 1.09001 * 109.47103 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47187 * 300.00233 * 1 2 3 30 30 H 1.09003 * 113.61548 * 254.53075 * 5 3 2 31 31 H 1.09011 * 113.61419 * 25.43051 * 5 3 2 32 32 H 1.08994 * 109.47417 * 32.50216 * 8 6 5 33 33 H 1.08999 * 109.46972 * 152.50001 * 8 6 5 34 34 H 1.08998 * 109.46838 * 300.00477 * 9 8 6 35 35 H 1.08999 * 109.46771 * 60.00224 * 9 8 6 36 36 H 0.96998 * 119.99652 * 0.02562 * 10 9 8 37 37 H 1.07996 * 120.03108 * 359.97438 * 18 17 16 38 38 H 1.07996 * 119.97532 * 180.23465 * 19 18 17 39 39 H 1.08990 * 109.46922 * 125.02268 * 21 20 19 40 40 H 0.96703 * 113.99961 * 180.02562 * 22 21 20 41 41 H 1.48498 * 109.99850 * 300.00132 * 23 21 20 42 42 H 1.48500 * 109.99994 * 61.31528 * 23 21 20 43 43 H 1.07993 * 119.97511 * 179.97438 * 24 20 19 44 44 H 1.08001 * 120.02445 * 179.97438 * 25 24 20 45 45 H 1.08998 * 113.61221 * 334.56248 * 26 3 2 46 46 H 1.08998 * 113.61591 * 105.38742 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0788 -0.3238 5 6 2.7534 1.6490 1.3017 6 6 3.8227 2.3182 0.4222 7 1 3.6222 3.3693 0.2149 8 6 5.2542 2.0680 0.9007 9 6 5.6425 3.1341 1.9273 10 7 7.0134 2.8949 2.3850 11 6 7.5718 3.7146 3.2976 12 8 6.9395 4.6503 3.7395 13 6 8.9823 3.4689 3.7681 14 9 9.0635 2.2023 4.3567 15 9 9.8556 3.5329 2.6770 16 8 9.3448 4.4644 4.7269 17 6 10.5946 4.3863 5.2550 18 6 11.4523 3.3690 4.8626 19 6 12.7241 3.2948 5.3969 20 6 13.1387 4.2274 6.3299 21 6 14.5246 4.1408 6.9154 22 8 14.4341 3.8647 8.3145 23 14 15.4706 2.7748 6.0727 24 6 12.2838 5.2389 6.7268 25 6 11.0128 5.3205 6.1915 26 6 3.3756 1.3719 -0.7045 27 1 -0.3632 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5139 0.8900 30 1 2.2140 2.3478 1.9411 31 1 3.1166 0.7741 1.8411 32 1 5.3167 1.0816 1.3600 33 1 5.9351 2.1170 0.0510 34 1 5.5800 4.1206 1.4680 35 1 4.9616 3.0852 2.7771 36 1 7.5192 2.1467 2.0313 37 1 11.1273 2.6377 4.1373 38 1 13.3935 2.5053 5.0890 39 1 15.0425 5.0879 6.7647 40 1 15.2907 3.7956 8.7580 41 1 14.7746 1.4780 6.2708 42 1 15.5990 3.0658 4.6222 43 1 12.6098 5.9658 7.4559 44 1 10.3452 6.1106 6.5022 45 1 3.9088 0.4213 -0.7136 46 1 3.3382 1.8457 -1.6854 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16488024_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:16:14 Heat of formation + Delta-G solvation = -186.593158 kcal Electronic energy + Delta-G solvation = -31429.493207 eV Core-core repulsion = 26537.399535 eV Total energy + Delta-G solvation = -4892.093671 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.147 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -51.01328 -48.98657 -41.56001 -41.20494 -40.49802 -39.31258 -37.67349 -37.30802 -36.35272 -32.68553 -32.36727 -32.06170 -29.17451 -27.69938 -26.74051 -26.41906 -25.45478 -24.47477 -22.79732 -22.71922 -22.35536 -20.80196 -20.48711 -19.95209 -19.81757 -18.39786 -18.22470 -17.69503 -17.42302 -17.12413 -16.92375 -16.66768 -16.55349 -16.29676 -16.17491 -15.98752 -15.84016 -15.61677 -15.50289 -15.34956 -15.23678 -14.96599 -14.84777 -14.54676 -14.42868 -14.02994 -13.74349 -13.72317 -13.54049 -13.39350 -13.26140 -13.09432 -12.60558 -12.48481 -12.32137 -12.22005 -12.01456 -11.87333 -11.75397 -11.41688 -11.25642 -10.61534 -10.42228 -10.36592 -10.31877 -9.70693 -4.97306 -0.12911 -0.02014 0.37138 0.55082 1.27889 1.56468 1.61888 1.90562 1.94614 2.29291 2.68108 2.89406 3.10955 3.27222 3.40784 3.42550 3.50810 3.59796 3.78041 3.82753 3.86465 3.92725 3.99612 4.08003 4.16475 4.21023 4.23855 4.42927 4.45179 4.51263 4.53693 4.57559 4.66634 4.72877 4.76933 4.81365 4.82385 4.86675 4.87189 4.92211 5.01684 5.09726 5.19778 5.23275 5.25068 5.43108 5.67763 5.76150 6.29387 6.36804 6.91426 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.404 6.404 3 C 0.047 3.953 4 H 0.097 0.903 5 C -0.155 4.155 6 C -0.097 4.097 7 H 0.108 0.892 8 C -0.112 4.112 9 C 0.117 3.883 10 N -0.685 5.685 11 C 0.516 3.484 12 O -0.507 6.507 13 C 0.431 3.569 14 F -0.174 7.174 15 F -0.172 7.172 16 O -0.301 6.301 17 C 0.086 3.914 18 C -0.194 4.194 19 C -0.100 4.100 20 C -0.109 4.109 21 C -0.073 4.073 22 O -0.563 6.563 23 Si 0.770 3.230 24 C -0.053 4.053 25 C -0.130 4.130 26 C -0.130 4.130 27 H 0.050 0.950 28 H 0.090 0.910 29 H 0.047 0.953 30 H 0.073 0.927 31 H 0.083 0.917 32 H 0.080 0.920 33 H 0.090 0.910 34 H 0.080 0.920 35 H 0.074 0.926 36 H 0.423 0.577 37 H 0.138 0.862 38 H 0.127 0.873 39 H 0.103 0.897 40 H 0.405 0.595 41 H -0.298 1.298 42 H -0.289 1.289 43 H 0.164 0.836 44 H 0.156 0.844 45 H 0.086 0.914 46 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.546 -0.329 -1.877 3.180 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.323 6.323 3 C -0.010 4.010 4 H 0.115 0.885 5 C -0.193 4.193 6 C -0.116 4.116 7 H 0.126 0.874 8 C -0.149 4.149 9 C -0.005 4.005 10 N -0.338 5.338 11 C 0.294 3.706 12 O -0.380 6.380 13 C 0.354 3.646 14 F -0.155 7.155 15 F -0.154 7.154 16 O -0.218 6.218 17 C 0.043 3.957 18 C -0.212 4.212 19 C -0.118 4.118 20 C -0.110 4.110 21 C -0.183 4.183 22 O -0.373 6.373 23 Si 0.677 3.323 24 C -0.071 4.071 25 C -0.148 4.148 26 C -0.168 4.168 27 H 0.069 0.931 28 H 0.108 0.892 29 H 0.065 0.935 30 H 0.091 0.909 31 H 0.102 0.898 32 H 0.099 0.901 33 H 0.109 0.891 34 H 0.098 0.902 35 H 0.092 0.908 36 H 0.261 0.739 37 H 0.156 0.844 38 H 0.144 0.856 39 H 0.120 0.880 40 H 0.257 0.743 41 H -0.226 1.226 42 H -0.216 1.216 43 H 0.182 0.818 44 H 0.173 0.827 45 H 0.105 0.895 46 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 1.408 -0.325 -2.283 2.702 hybrid contribution -0.435 -0.323 -0.375 0.659 sum 0.973 -0.648 -2.659 2.904 Atomic orbital electron populations 1.22921 0.80129 1.03507 1.00633 1.87910 1.20980 1.28677 1.94778 1.23946 0.94533 0.84975 0.97566 0.88535 1.23625 0.97796 1.00819 0.97013 1.22188 0.93142 1.00022 0.96249 0.87428 1.21717 0.96654 0.98265 0.98308 1.21751 0.79299 1.00808 0.98594 1.45830 1.17267 1.30376 1.40369 1.19304 0.84937 0.84499 0.81893 1.90854 1.61287 1.30030 1.55879 1.21909 0.89295 0.75720 0.77712 1.93192 1.96676 1.41433 1.84215 1.93190 1.71758 1.95663 1.54759 1.86645 1.31365 1.49109 1.54666 1.19200 0.82769 0.97269 0.96445 1.21504 0.95494 0.99829 1.04416 1.20855 0.95321 0.98251 0.97339 1.19800 0.97107 0.96229 0.97823 1.24724 0.96022 1.09945 0.87631 1.86443 1.37078 1.94664 1.19121 0.94424 0.85703 0.74618 0.77589 1.21180 0.91116 0.97445 0.97335 1.20835 0.97835 0.99420 0.96700 1.23267 0.94789 1.00225 0.98480 0.93149 0.89174 0.93466 0.90857 0.89811 0.90112 0.89139 0.90174 0.90752 0.73912 0.84441 0.85586 0.87963 0.74342 1.22627 1.21611 0.81844 0.82663 0.89513 0.90023 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 10.85 113.37 1.23 1.21 16 2 O -0.40 -1.55 10.71 -148.98 -1.60 -3.14 16 3 C 0.05 -0.05 4.31 31.12 0.13 0.08 16 4 H 0.10 -0.33 7.87 -2.39 -0.02 -0.35 16 5 C -0.15 0.42 7.46 31.12 0.23 0.66 16 6 C -0.10 0.57 3.65 -10.27 -0.04 0.54 16 7 H 0.11 -0.80 8.13 -2.39 -0.02 -0.82 16 8 C -0.11 0.83 5.17 30.59 0.16 0.99 16 9 C 0.12 -0.44 5.67 86.38 0.49 0.05 16 10 N -0.68 1.22 5.56 -463.06 -2.57 -1.35 16 11 C 0.52 3.09 7.34 87.66 0.64 3.73 16 12 O -0.51 -6.58 16.50 16.02 0.26 -6.32 16 13 C 0.43 2.94 2.05 71.24 0.15 3.08 16 14 F -0.17 -1.02 15.27 44.97 0.69 -0.33 16 15 F -0.17 -0.90 15.31 44.97 0.69 -0.21 16 16 O -0.30 -3.33 9.60 -73.42 -0.71 -4.03 16 17 C 0.09 0.84 6.48 22.50 0.15 0.98 16 18 C -0.19 -1.71 8.26 22.37 0.18 -1.53 16 19 C -0.10 -0.77 8.66 22.26 0.19 -0.58 16 20 C -0.11 -0.58 5.39 -19.85 -0.11 -0.68 16 21 C -0.07 0.08 2.79 71.24 0.20 0.28 16 22 O -0.56 0.57 12.81 -148.98 -1.91 -1.34 16 23 Si 0.77 -1.44 29.85 68.60 2.05 0.61 16 24 C -0.05 -0.21 9.68 22.26 0.22 0.00 16 25 C -0.13 -0.82 9.99 22.37 0.22 -0.59 16 26 C -0.13 0.47 7.47 31.12 0.23 0.70 16 27 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 28 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 29 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 30 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 31 H 0.08 -0.08 7.90 -2.38 -0.02 -0.10 16 32 H 0.08 -0.60 7.84 -2.39 -0.02 -0.62 16 33 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 34 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 35 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 36 H 0.42 -2.94 8.47 -92.71 -0.79 -3.72 16 37 H 0.14 0.98 5.10 -2.91 -0.01 0.96 16 38 H 0.13 0.80 4.86 -2.91 -0.01 0.78 16 39 H 0.10 -0.61 7.96 -2.39 -0.02 -0.63 16 40 H 0.41 -4.73 8.74 -74.06 -0.65 -5.38 16 41 H -0.30 -1.78 7.05 99.48 0.70 -1.08 16 42 H -0.29 -1.08 7.11 99.48 0.71 -0.37 16 43 H 0.16 -0.17 8.06 -2.91 -0.02 -0.20 16 44 H 0.16 0.45 8.06 -2.91 -0.02 0.43 16 45 H 0.09 -0.19 8.10 -2.39 -0.02 -0.21 16 46 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 Total: 0.00 -21.78 391.20 0.82 -20.97 By element: Atomic # 1 Polarization: -13.39 SS G_CDS: -0.37 Total: -13.76 kcal Atomic # 6 Polarization: 4.63 SS G_CDS: 4.28 Total: 8.91 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -2.57 Total: -1.35 kcal Atomic # 8 Polarization: -10.89 SS G_CDS: -3.95 Total: -14.83 kcal Atomic # 9 Polarization: -1.92 SS G_CDS: 1.38 Total: -0.54 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: 2.05 Total: 0.61 kcal Total: -21.78 0.82 -20.97 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16488024_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -165.627 kcal (2) G-P(sol) polarization free energy of solvation -21.783 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -187.410 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.817 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.966 kcal (6) G-S(sol) free energy of system = (1) + (5) -186.593 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds