Wall clock time and date at job start Sun Mar 7 2021 05:16:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42897 * 114.00218 * 2 1 4 4 H 1.09000 * 112.84260 * 18.80114 * 3 2 1 5 5 C 1.53774 * 113.61532 * 149.99907 * 3 2 1 6 6 C 1.53782 * 87.08110 * 139.98321 * 5 3 2 7 7 H 1.08994 * 113.61613 * 89.19833 * 6 5 3 8 8 C 1.53003 * 113.61224 * 220.02306 * 6 5 3 9 9 C 1.53005 * 109.46693 * 184.99795 * 8 6 5 10 10 N 1.46505 * 109.46904 * 179.97438 * 9 8 6 11 11 C 1.34777 * 119.99724 * 180.02562 * 10 9 8 12 12 O 1.21693 * 120.00201 * 359.97438 * 11 10 9 13 13 C 1.46679 * 119.99308 * 179.72494 * 11 10 9 14 14 C 1.37880 * 126.22617 * 180.29832 * 13 11 10 15 15 C 1.39838 * 107.08097 * 180.02562 * 14 13 11 16 16 C 1.35455 * 107.86493 * 359.97438 * 15 14 13 17 17 C 1.50698 * 125.56075 * 180.02562 * 16 15 14 18 18 O 1.42904 * 109.47149 * 245.02713 * 17 16 15 19 19 Si 1.86303 * 109.47471 * 5.02661 * 17 16 15 20 20 N 1.35537 * 108.87121 * 359.73385 * 16 15 14 21 21 C 1.53776 * 113.61149 * 247.50092 * 3 2 1 22 22 H 1.09010 * 109.46854 * 179.97438 * 1 2 3 23 23 H 1.08997 * 109.47177 * 299.99833 * 1 2 3 24 24 H 1.08994 * 109.47260 * 60.00393 * 1 2 3 25 25 H 1.09002 * 113.61510 * 25.43203 * 5 3 2 26 26 H 1.08996 * 113.69269 * 254.54242 * 5 3 2 27 27 H 1.08995 * 109.47699 * 64.99877 * 8 6 5 28 28 H 1.09001 * 109.46882 * 304.99480 * 8 6 5 29 29 H 1.09003 * 109.46832 * 59.99920 * 9 8 6 30 30 H 1.08993 * 109.47355 * 299.99770 * 9 8 6 31 31 H 0.97000 * 119.99792 * 359.97438 * 10 9 8 32 32 H 1.07993 * 126.46033 * 359.97438 * 14 13 11 33 33 H 1.07999 * 126.06714 * 179.97438 * 15 14 13 34 34 H 1.09000 * 109.46944 * 125.02700 * 17 16 15 35 35 H 0.96698 * 114.00236 * 59.99922 * 18 17 16 36 36 H 1.48496 * 109.99855 * 58.67650 * 19 17 16 37 37 H 1.48497 * 110.00323 * 179.97438 * 19 17 16 38 38 H 0.96996 * 125.67158 * 180.30363 * 20 16 15 39 39 H 1.08998 * 113.61991 * 105.47299 * 21 3 2 40 40 H 1.08997 * 113.61745 * 334.55832 * 21 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3137 2.0788 0.3237 5 6 3.3755 1.3718 0.7045 6 6 3.8227 2.3181 -0.4222 7 1 3.6235 3.3693 -0.2143 8 6 5.2543 2.0678 -0.9007 9 6 5.6425 3.1338 -1.9273 10 7 7.0135 2.8946 -2.3851 11 6 7.5722 3.7148 -3.2970 12 8 6.9378 4.6537 -3.7405 13 6 8.9469 3.4787 -3.7507 14 6 9.6433 4.2358 -4.6688 15 6 10.9090 3.6566 -4.8033 16 6 10.9627 2.5801 -3.9828 17 6 12.1477 1.6645 -3.8147 18 8 11.8108 0.3580 -4.2854 19 14 13.5874 2.3256 -4.7950 20 7 9.7789 2.4648 -3.3329 21 6 2.7534 1.6487 -1.3018 22 1 -0.3633 -1.0278 -0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5137 -0.8900 25 1 3.9088 0.4212 0.7138 26 1 3.3398 1.8466 1.6850 27 1 5.3167 1.0813 -1.3600 28 1 5.9351 2.1167 -0.0509 29 1 5.5801 4.1204 -1.4680 30 1 4.9617 3.0849 -2.7771 31 1 7.5193 2.1463 -2.0312 32 1 9.2796 5.1106 -5.1871 33 1 11.7028 4.0056 -5.4470 34 1 12.4196 1.6120 -2.7604 35 1 11.5579 0.3291 -5.2184 36 1 13.9272 3.6966 -4.3366 37 1 14.7627 1.4318 -4.6371 38 1 9.5545 1.7803 -2.6834 39 1 2.2141 2.3476 -1.9412 40 1 3.1166 0.7739 -1.8410 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16488024_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:16:52 Heat of formation + Delta-G solvation = -48.086990 kcal Electronic energy + Delta-G solvation = -21265.785740 eV Core-core repulsion = 17855.626138 eV Total energy + Delta-G solvation = -3410.159602 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.50347 -40.74892 -40.06889 -37.80531 -37.56421 -35.98315 -32.60736 -31.84106 -31.04263 -27.88214 -27.09162 -26.75308 -25.34571 -23.09954 -22.69336 -21.54471 -21.10567 -20.62418 -19.82649 -18.17508 -17.66172 -17.07870 -16.89339 -16.59158 -16.50360 -16.12117 -16.04248 -15.63228 -15.19204 -15.14548 -14.94564 -14.41816 -14.29365 -13.97326 -13.84029 -13.61898 -13.49079 -13.47274 -13.08565 -12.51823 -12.38769 -12.25835 -12.08350 -11.85608 -11.64924 -11.38249 -11.11919 -10.74597 -10.45045 -10.22616 -10.07588 -9.26004 -5.06927 0.36972 1.10554 1.53893 1.63475 1.83181 2.01440 2.14692 2.40172 2.81953 3.27535 3.35095 3.50085 3.53108 3.70543 3.75355 3.77241 3.96605 4.14116 4.16660 4.19850 4.26658 4.35227 4.40424 4.43601 4.48068 4.54166 4.72886 4.73854 4.76143 4.84820 4.89495 4.98769 5.00708 5.08601 5.14350 5.27208 5.31104 5.59603 5.82664 6.19677 6.24803 6.36361 6.41544 7.12312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.379 6.379 3 C 0.059 3.941 4 H 0.088 0.912 5 C -0.132 4.132 6 C -0.107 4.107 7 H 0.097 0.903 8 C -0.119 4.119 9 C 0.120 3.880 10 N -0.734 5.734 11 C 0.589 3.411 12 O -0.524 6.524 13 C -0.051 4.051 14 C -0.098 4.098 15 C -0.199 4.199 16 C 0.021 3.979 17 C -0.056 4.056 18 O -0.543 6.543 19 Si 0.722 3.278 20 N -0.524 5.524 21 C -0.152 4.152 22 H 0.086 0.914 23 H 0.042 0.958 24 H 0.042 0.958 25 H 0.092 0.908 26 H 0.074 0.926 27 H 0.073 0.927 28 H 0.072 0.928 29 H 0.071 0.929 30 H 0.072 0.928 31 H 0.394 0.606 32 H 0.153 0.847 33 H 0.152 0.848 34 H 0.114 0.886 35 H 0.384 0.616 36 H -0.253 1.253 37 H -0.254 1.254 38 H 0.416 0.584 39 H 0.071 0.929 40 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.138 -1.912 0.207 1.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.297 6.297 3 C 0.001 3.999 4 H 0.106 0.894 5 C -0.169 4.169 6 C -0.126 4.126 7 H 0.115 0.885 8 C -0.157 4.157 9 C -0.003 4.003 10 N -0.385 5.385 11 C 0.376 3.624 12 O -0.400 6.400 13 C -0.165 4.165 14 C -0.125 4.125 15 C -0.224 4.224 16 C -0.097 4.097 17 C -0.166 4.166 18 O -0.349 6.349 19 Si 0.621 3.379 20 N -0.120 5.120 21 C -0.190 4.190 22 H 0.104 0.896 23 H 0.061 0.939 24 H 0.061 0.939 25 H 0.110 0.890 26 H 0.092 0.908 27 H 0.092 0.908 28 H 0.091 0.909 29 H 0.090 0.910 30 H 0.091 0.909 31 H 0.228 0.772 32 H 0.171 0.829 33 H 0.169 0.831 34 H 0.131 0.869 35 H 0.232 0.768 36 H -0.177 1.177 37 H -0.178 1.178 38 H 0.253 0.747 39 H 0.090 0.910 40 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 0.635 -1.347 0.659 1.629 hybrid contribution -0.571 -0.522 1.129 1.368 sum 0.064 -1.869 1.788 2.587 Atomic orbital electron populations 1.22811 0.80972 1.02964 1.00019 1.87947 1.19835 1.27331 1.94588 1.23716 0.93927 0.85411 0.96857 0.89433 1.23280 0.95457 1.00243 0.97948 1.22229 0.93538 0.99681 0.97115 0.88453 1.21751 0.96557 0.98918 0.98465 1.21425 0.81744 0.99281 0.97824 1.45913 1.16481 1.31854 1.44280 1.17055 0.84260 0.82245 0.78795 1.90877 1.62363 1.29951 1.56765 1.20474 0.92770 0.96166 1.07065 1.21342 0.93104 1.00047 0.97961 1.20713 0.99086 0.98062 1.04496 1.21159 0.88743 1.00470 0.99343 1.24961 1.00700 0.85343 1.05569 1.86501 1.90303 1.26092 1.31997 0.94000 0.75075 0.79267 0.89542 1.41951 1.11593 1.24162 1.34308 1.23617 0.97335 1.00931 0.97101 0.89564 0.93936 0.93941 0.88975 0.90776 0.90850 0.90900 0.91045 0.90920 0.77237 0.82917 0.83076 0.86857 0.76824 1.17708 1.17839 0.74661 0.91038 0.89029 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.74 10.71 -35.23 -0.38 -1.12 16 3 C 0.06 -0.01 4.31 -25.93 -0.11 -0.12 16 4 H 0.09 -0.10 7.87 -51.93 -0.41 -0.51 16 5 C -0.13 0.14 7.47 -25.92 -0.19 -0.05 16 6 C -0.11 0.20 3.65 -89.80 -0.33 -0.13 16 7 H 0.10 -0.22 8.13 -51.93 -0.42 -0.64 16 8 C -0.12 0.29 5.17 -26.73 -0.14 0.15 16 9 C 0.12 -0.07 5.67 -4.04 -0.02 -0.09 16 10 N -0.73 0.27 5.55 -61.61 -0.34 -0.07 16 11 C 0.59 1.68 7.79 -12.85 -0.10 1.58 16 12 O -0.52 -3.52 16.88 5.20 0.09 -3.44 16 13 C -0.05 -0.08 7.06 -81.98 -0.58 -0.66 16 14 C -0.10 -0.17 10.65 -39.11 -0.42 -0.59 16 15 C -0.20 0.02 9.32 -39.98 -0.37 -0.35 16 16 C 0.02 -0.01 6.47 -81.95 -0.53 -0.54 16 17 C -0.06 0.09 3.08 36.00 0.11 0.21 16 18 O -0.54 0.75 12.88 -35.23 -0.45 0.30 16 19 Si 0.72 -1.65 30.56 -169.99 -5.19 -6.84 16 20 N -0.52 0.39 5.99 -5.69 -0.03 0.36 16 21 C -0.15 0.13 7.46 -25.92 -0.19 -0.07 16 22 H 0.09 -0.10 8.14 -51.92 -0.42 -0.53 16 23 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 24 H 0.04 -0.04 8.14 -51.93 -0.42 -0.47 16 25 H 0.09 -0.05 8.10 -51.93 -0.42 -0.47 16 26 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.07 -0.18 7.84 -51.93 -0.41 -0.59 16 28 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 29 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 31 H 0.39 -1.20 7.60 -40.82 -0.31 -1.51 16 32 H 0.15 0.23 8.06 -52.49 -0.42 -0.20 16 33 H 0.15 -0.35 6.19 -52.49 -0.32 -0.68 16 34 H 0.11 -0.19 7.96 -51.93 -0.41 -0.60 16 35 H 0.38 -1.86 8.70 45.56 0.40 -1.46 16 36 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 37 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 38 H 0.42 -1.27 8.19 -40.82 -0.33 -1.61 16 39 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 40 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 LS Contribution 337.40 15.07 5.08 5.08 Total: 0.00 -8.35 337.40 -9.07 -17.42 By element: Atomic # 1 Polarization: -6.06 SS G_CDS: -6.06 Total: -12.11 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: -1.78 Total: 0.43 kcal Atomic # 7 Polarization: 0.66 SS G_CDS: -0.38 Total: 0.29 kcal Atomic # 8 Polarization: -3.51 SS G_CDS: -0.74 Total: -4.26 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.19 Total: -6.84 kcal Total LS contribution 5.08 Total: 5.08 kcal Total: -8.35 -9.07 -17.42 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16488024_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.668 kcal (2) G-P(sol) polarization free energy of solvation -8.354 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.021 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.419 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.087 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds