Wall clock time and date at job start Sun Mar 7 2021 05:17:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42897 * 113.99742 * 2 1 4 4 H 1.09004 * 112.85245 * 18.80292 * 3 2 1 5 5 C 1.53780 * 113.61540 * 149.99641 * 3 2 1 6 6 C 1.53781 * 87.08277 * 139.98033 * 5 3 2 7 7 H 1.08997 * 113.61562 * 89.11888 * 6 5 3 8 8 C 1.53005 * 113.61680 * 219.93751 * 6 5 3 9 9 C 1.52998 * 109.47221 * 184.99795 * 8 6 5 10 10 N 1.46502 * 109.46835 * 180.02562 * 9 8 6 11 11 C 1.34779 * 119.99398 * 179.97438 * 10 9 8 12 12 O 1.21625 * 120.00444 * 0.02562 * 11 10 9 13 13 C 1.47260 * 119.99522 * 179.97438 * 11 10 9 14 14 C 1.36772 * 126.94047 * 179.71180 * 13 11 10 15 15 C 1.50700 * 125.80316 * 359.97438 * 14 13 11 16 16 N 1.34665 * 108.39642 * 179.84051 * 14 13 11 17 17 C 1.36445 * 110.29729 * 0.44716 * 16 14 13 18 18 C 1.50693 * 125.57279 * 179.74949 * 17 16 14 19 19 O 1.42902 * 109.47305 * 64.99825 * 18 17 16 20 20 Si 1.86300 * 109.47574 * 184.99866 * 18 17 16 21 21 C 1.34486 * 108.85790 * 359.72455 * 17 16 14 22 22 C 1.53780 * 87.08133 * 334.56873 * 6 5 3 23 23 H 1.09001 * 109.47103 * 60.00503 * 1 2 3 24 24 H 1.09004 * 109.47054 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.47187 * 300.00063 * 1 2 3 26 26 H 1.09003 * 113.62173 * 254.53182 * 5 3 2 27 27 H 1.09005 * 113.60865 * 25.43478 * 5 3 2 28 28 H 1.08996 * 109.46854 * 305.00568 * 8 6 5 29 29 H 1.09004 * 109.46619 * 65.00014 * 8 6 5 30 30 H 1.09000 * 109.46958 * 300.00099 * 9 8 6 31 31 H 1.09004 * 109.46497 * 60.00157 * 9 8 6 32 32 H 0.96993 * 120.00145 * 0.02562 * 10 9 8 33 33 H 1.08997 * 109.46807 * 89.99695 * 15 14 13 34 34 H 1.08991 * 109.47285 * 210.00106 * 15 14 13 35 35 H 1.09005 * 109.46873 * 330.00439 * 15 14 13 36 36 H 0.96994 * 124.85174 * 180.14802 * 16 14 13 37 37 H 1.09000 * 109.47557 * 304.99858 * 18 17 16 38 38 H 0.96699 * 114.00102 * 59.99979 * 19 18 17 39 39 H 1.48497 * 110.00383 * 180.02562 * 20 18 17 40 40 H 1.48504 * 109.99823 * 301.31950 * 20 18 17 41 41 H 1.07997 * 126.83536 * 180.02562 * 21 17 16 42 42 H 1.08999 * 113.61828 * 270.88247 * 22 6 5 43 43 H 1.08996 * 113.61735 * 139.97942 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 0.3238 5 6 3.3755 1.3720 0.7046 6 6 3.8227 2.3182 -0.4221 7 1 3.6222 3.3693 -0.2149 8 6 5.2550 2.0694 -0.8992 9 6 5.6430 3.1353 -1.9259 10 7 7.0143 2.8966 -2.3831 11 6 7.5725 3.7163 -3.2958 12 8 6.9381 4.6543 -3.7395 13 6 8.9511 3.4768 -3.7549 14 6 9.6507 4.2102 -4.6732 15 6 9.1401 5.4241 -5.4059 16 7 10.8745 3.6649 -4.8093 17 6 10.9981 2.5719 -4.0019 18 6 12.2222 1.7005 -3.8874 19 8 13.2988 2.4616 -3.3364 20 14 11.8521 0.2526 -2.7750 21 6 9.8491 2.3996 -3.3246 22 6 2.7535 1.6489 -1.3017 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 0.8900 26 1 3.3384 1.8472 1.6849 27 1 3.9088 0.4213 0.7138 28 1 5.9350 2.1194 -0.0488 29 1 5.3189 1.0827 -1.3580 30 1 4.9630 3.0852 -2.7763 31 1 5.5791 4.1220 -1.4670 32 1 7.5201 2.1484 -2.0295 33 1 9.3719 6.3200 -4.8301 34 1 9.6182 5.4863 -6.3833 35 1 8.0606 5.3437 -5.5339 36 1 11.5674 3.9986 -5.4003 37 1 12.5030 1.3367 -4.8758 38 1 13.1185 2.8174 -2.4555 39 1 13.0517 -0.6142 -2.6534 40 1 11.4372 0.7359 -1.4335 41 1 9.6310 1.6231 -2.6064 42 1 3.1167 0.7740 -1.8410 43 1 2.2141 2.3476 -1.9412 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16488024_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:17:19 Heat of formation + Delta-G solvation = -55.454770 kcal Electronic energy + Delta-G solvation = -23278.477887 eV Core-core repulsion = 19712.461176 eV Total energy + Delta-G solvation = -3566.016711 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.45182 -40.64667 -39.88104 -37.94151 -37.46906 -35.72783 -32.94671 -32.51501 -31.19969 -29.03431 -27.73645 -26.74462 -26.08459 -25.00069 -23.05397 -22.45451 -21.46788 -20.73981 -20.27454 -19.19388 -17.65935 -17.22051 -16.99023 -16.79415 -16.66029 -16.50198 -16.30274 -15.95588 -15.57509 -15.40180 -15.22752 -14.77996 -14.50781 -14.38017 -13.96458 -13.84194 -13.60367 -13.39897 -13.38955 -13.35931 -13.00223 -12.95491 -12.39560 -12.28770 -12.23504 -11.93809 -11.76273 -11.50425 -11.26981 -10.92442 -10.63736 -10.38457 -10.01353 -9.79992 -9.15985 -5.02082 0.81507 1.08337 1.21185 1.54826 1.81575 2.14149 2.52964 2.69285 2.89488 3.23158 3.46603 3.52075 3.60211 3.80103 3.85185 3.86591 4.01753 4.12238 4.17503 4.27949 4.32601 4.34640 4.42876 4.48238 4.50057 4.58535 4.67304 4.69483 4.71828 4.78497 4.82787 4.84086 4.93029 4.97047 5.04810 5.12833 5.21904 5.24785 5.40747 5.61604 5.68540 5.87913 6.24712 6.30791 6.38014 6.73915 7.51275 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.378 6.378 3 C 0.058 3.942 4 H 0.087 0.913 5 C -0.132 4.132 6 C -0.106 4.106 7 H 0.096 0.904 8 C -0.119 4.119 9 C 0.122 3.878 10 N -0.729 5.729 11 C 0.592 3.408 12 O -0.549 6.549 13 C -0.236 4.236 14 C 0.120 3.880 15 C -0.099 4.099 16 N -0.536 5.536 17 C -0.012 4.012 18 C -0.057 4.057 19 O -0.534 6.534 20 Si 0.713 3.287 21 C -0.158 4.158 22 C -0.152 4.152 23 H 0.042 0.958 24 H 0.085 0.915 25 H 0.041 0.959 26 H 0.073 0.927 27 H 0.092 0.908 28 H 0.072 0.928 29 H 0.074 0.926 30 H 0.068 0.932 31 H 0.067 0.933 32 H 0.400 0.600 33 H 0.080 0.920 34 H 0.066 0.934 35 H 0.104 0.896 36 H 0.419 0.581 37 H 0.118 0.882 38 H 0.379 0.621 39 H -0.255 1.255 40 H -0.255 1.255 41 H 0.149 0.851 42 H 0.092 0.908 43 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.522 -1.977 0.433 2.090 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.297 6.297 3 C 0.000 4.000 4 H 0.105 0.895 5 C -0.169 4.169 6 C -0.125 4.125 7 H 0.114 0.886 8 C -0.157 4.157 9 C -0.002 4.002 10 N -0.380 5.380 11 C 0.382 3.618 12 O -0.428 6.428 13 C -0.246 4.246 14 C 0.001 3.999 15 C -0.156 4.156 16 N -0.131 5.131 17 C -0.122 4.122 18 C -0.166 4.166 19 O -0.341 6.341 20 Si 0.612 3.388 21 C -0.182 4.182 22 C -0.189 4.189 23 H 0.060 0.940 24 H 0.104 0.896 25 H 0.060 0.940 26 H 0.091 0.909 27 H 0.111 0.889 28 H 0.091 0.909 29 H 0.092 0.908 30 H 0.087 0.913 31 H 0.085 0.915 32 H 0.234 0.766 33 H 0.098 0.902 34 H 0.085 0.915 35 H 0.122 0.878 36 H 0.256 0.744 37 H 0.135 0.865 38 H 0.227 0.773 39 H -0.180 1.180 40 H -0.179 1.179 41 H 0.167 0.833 42 H 0.110 0.890 43 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -0.279 -2.027 0.233 2.060 hybrid contribution 0.821 1.019 0.403 1.369 sum 0.541 -1.008 0.636 1.309 Atomic orbital electron populations 1.22805 0.81062 1.02909 0.99977 1.87948 1.19750 1.27386 1.94596 1.23734 0.93938 0.85326 0.96987 0.89531 1.23284 0.95386 1.00310 0.97936 1.22226 0.93781 0.99536 0.96985 0.88608 1.21742 0.96227 0.99103 0.98596 1.21337 0.82390 0.98905 0.97523 1.45763 1.15818 1.32202 1.44256 1.17292 0.84861 0.81473 0.78223 1.90755 1.63912 1.30727 1.57391 1.20007 0.95560 1.01892 1.07100 1.20460 0.84681 0.96783 0.97954 1.20638 1.04008 0.92600 0.98343 1.41588 1.12976 1.23516 1.35071 1.20713 0.98305 0.93548 0.99610 1.24826 0.84907 1.00163 1.06745 1.86597 1.39689 1.70836 1.36972 0.94422 0.85972 0.79085 0.79324 1.21775 0.92838 1.00313 1.03308 1.23611 0.97341 1.00947 0.97037 0.93968 0.89607 0.93994 0.90871 0.88926 0.90908 0.90783 0.91332 0.91506 0.76615 0.90170 0.91526 0.87774 0.74403 0.86467 0.77253 1.17984 1.17900 0.83330 0.88981 0.91143 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.85 101.05 1.10 1.09 16 2 O -0.38 -0.78 10.71 -35.23 -0.38 -1.16 16 3 C 0.06 0.00 4.31 -25.92 -0.11 -0.11 16 4 H 0.09 -0.08 7.87 -51.93 -0.41 -0.49 16 5 C -0.13 0.11 7.47 -25.92 -0.19 -0.08 16 6 C -0.11 0.17 3.65 -89.81 -0.33 -0.16 16 7 H 0.10 -0.18 8.13 -51.93 -0.42 -0.60 16 8 C -0.12 0.23 5.17 -26.73 -0.14 0.10 16 9 C 0.12 0.00 5.66 -4.04 -0.02 -0.02 16 10 N -0.73 -0.38 5.55 -61.43 -0.34 -0.72 16 11 C 0.59 2.03 7.81 -12.59 -0.10 1.93 16 12 O -0.55 -3.59 14.82 5.26 0.08 -3.51 16 13 C -0.24 -0.51 6.29 -103.35 -0.65 -1.16 16 14 C 0.12 0.17 7.17 -81.88 -0.59 -0.42 16 15 C -0.10 -0.05 9.88 36.01 0.36 0.31 16 16 N -0.54 0.17 5.90 -5.42 -0.03 0.14 16 17 C -0.01 0.00 6.47 -81.87 -0.53 -0.53 16 18 C -0.06 0.08 3.08 36.00 0.11 0.19 16 19 O -0.53 -0.04 12.88 -35.23 -0.45 -0.49 16 20 Si 0.71 -1.60 30.58 -169.99 -5.20 -6.80 16 21 C -0.16 0.02 9.03 -37.50 -0.34 -0.32 16 22 C -0.15 0.09 7.47 -25.92 -0.19 -0.10 16 23 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 24 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 25 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.09 -0.04 8.10 -51.93 -0.42 -0.46 16 28 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 29 H 0.07 -0.16 7.85 -51.93 -0.41 -0.57 16 30 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 31 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 32 H 0.40 -0.75 7.60 -40.82 -0.31 -1.06 16 33 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 34 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 35 H 0.10 0.24 6.47 -51.93 -0.34 -0.09 16 36 H 0.42 -0.94 8.96 -40.82 -0.37 -1.31 16 37 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 38 H 0.38 -0.91 8.70 45.56 0.40 -0.52 16 39 H -0.26 -0.27 7.11 56.52 0.40 0.14 16 40 H -0.25 0.13 7.11 56.52 0.40 0.53 16 41 H 0.15 -0.37 5.88 -52.49 -0.31 -0.68 16 42 H 0.09 0.00 7.90 -51.93 -0.41 -0.41 16 43 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 LS Contribution 355.80 15.07 5.36 5.36 Total: 0.00 -7.91 355.80 -9.42 -17.33 By element: Atomic # 1 Polarization: -4.04 SS G_CDS: -6.83 Total: -10.87 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -1.63 Total: 0.72 kcal Atomic # 7 Polarization: -0.22 SS G_CDS: -0.37 Total: -0.59 kcal Atomic # 8 Polarization: -4.40 SS G_CDS: -0.75 Total: -5.16 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.20 Total: -6.80 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -7.91 -9.42 -17.33 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16488024_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.121 kcal (2) G-P(sol) polarization free energy of solvation -7.910 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.031 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.424 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.334 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.455 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds