Wall clock time and date at job start Sun Mar 7 2021 06:25:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.35533 * 125.67752 * 2 1 4 4 C 1.35448 * 108.87364 * 180.26542 * 3 2 1 5 5 C 1.50699 * 126.07019 * 179.74821 * 4 3 2 6 6 O 1.42902 * 109.47259 * 299.99939 * 5 4 3 7 7 Si 1.86302 * 109.47164 * 180.02562 * 5 4 3 8 8 C 1.39838 * 107.86330 * 359.76712 * 4 3 2 9 9 C 1.37651 * 125.67921 * 179.87508 * 2 1 3 10 10 C 1.46675 * 126.23202 * 359.97438 * 9 2 1 11 11 O 1.21692 * 120.00270 * 358.03631 * 10 9 2 12 12 N 1.34771 * 120.00033 * 178.03644 * 10 9 2 13 13 C 1.46502 * 120.00483 * 175.20598 * 12 10 9 14 14 C 1.52999 * 109.47655 * 179.97438 * 13 12 10 15 15 H 1.09005 * 109.46666 * 55.00203 * 14 13 12 16 16 C 1.52995 * 109.46968 * 175.00035 * 14 13 12 17 17 C 1.52999 * 109.46968 * 180.02562 * 16 14 13 18 18 C 1.52998 * 109.47551 * 300.00279 * 17 16 14 19 19 H 1.09004 * 109.47277 * 300.00152 * 18 17 16 20 20 C 1.47199 * 109.47672 * 179.97438 * 18 17 16 21 21 N 9.70502 * 121.07422 * 188.76537 * 8 1 2 22 22 C 1.53004 * 109.46923 * 59.99563 * 18 17 16 23 23 C 1.52998 * 109.46905 * 295.00247 * 14 13 12 24 24 H 1.08999 * 109.46807 * 265.90126 * 1 2 3 25 25 H 1.09001 * 109.47106 * 25.89806 * 1 2 3 26 26 H 1.08997 * 109.46878 * 145.90412 * 1 2 3 27 27 H 1.08000 * 125.56352 * 0.02562 * 3 2 1 28 28 H 1.08994 * 109.47351 * 60.00119 * 5 4 3 29 29 H 0.96700 * 114.00057 * 179.97438 * 6 5 4 30 30 H 1.48501 * 110.00093 * 60.00377 * 7 5 4 31 31 H 1.48504 * 110.00060 * 181.31585 * 7 5 4 32 32 H 1.08003 * 126.45838 * 180.02562 * 8 4 3 33 33 H 0.97005 * 120.00289 * 355.20767 * 12 10 9 34 34 H 1.09006 * 109.46537 * 59.99718 * 13 12 10 35 35 H 1.09001 * 109.46998 * 300.00636 * 13 12 10 36 36 H 1.08995 * 109.47395 * 299.99932 * 16 14 13 37 37 H 1.09005 * 109.47290 * 60.00550 * 16 14 13 38 38 H 1.09005 * 109.47394 * 60.00327 * 17 16 14 39 39 H 1.08997 * 109.47719 * 180.02562 * 17 16 14 40 40 H 1.08996 * 109.47274 * 60.00776 * 22 18 17 41 41 H 1.09003 * 109.46997 * 180.02562 * 22 18 17 42 42 H 1.08996 * 109.47357 * 299.99456 * 23 14 13 43 43 H 1.09000 * 109.47128 * 60.00243 * 23 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5521 0.7094 -0.0059 5 6 4.7536 1.6190 -0.0134 6 8 4.7210 2.4418 -1.1812 7 14 6.3089 0.5933 -0.0204 8 6 3.5780 -0.6888 -0.0044 9 6 2.2678 -1.1181 0.0024 10 6 1.8124 -2.5124 0.0060 11 8 0.6223 -2.7637 0.0432 12 7 2.7120 -3.5152 -0.0319 13 6 2.2640 -4.9058 0.0776 14 6 3.4745 -5.8388 0.0060 15 1 4.1983 -5.5540 0.7697 16 6 3.0218 -7.2806 0.2448 17 6 4.2323 -8.2136 0.1739 18 6 4.8801 -8.1046 -1.2079 19 1 4.1566 -8.3894 -1.9719 20 6 6.0451 -9.0017 -1.2760 21 7 6.9439 -9.6945 -1.3287 22 6 5.3327 -6.6626 -1.4467 23 6 4.1215 -5.7296 -1.3761 24 1 -0.3633 -0.0735 1.0250 25 1 -0.3633 0.9245 -0.4489 26 1 -0.3633 -0.8510 -0.5761 27 1 1.9081 2.1236 0.0004 28 1 4.7377 2.2492 0.8757 29 1 5.4660 3.0543 -1.2518 30 1 6.3424 -0.2701 -1.2282 31 1 7.5011 1.4784 0.0043 32 1 4.4583 -1.3144 -0.0076 33 1 3.6562 -3.3164 -0.1316 34 1 1.5816 -5.1331 -0.7414 35 1 1.7506 -5.0483 1.0285 36 1 2.5608 -7.3584 1.2294 37 1 2.2980 -7.5654 -0.5189 38 1 4.9559 -7.9287 0.9378 39 1 3.9099 -9.2408 0.3435 40 1 6.0562 -6.3777 -0.6829 41 1 5.7938 -6.5849 -2.4313 42 1 3.3977 -6.0143 -2.1397 43 1 4.4440 -4.7024 -1.5461 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16496578_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:25:23 Heat of formation + Delta-G solvation = -4.898267 kcal Electronic energy + Delta-G solvation = -24474.107624 eV Core-core repulsion = 20907.087207 eV Total energy + Delta-G solvation = -3567.020417 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.157 amu Computer time = 1.99 seconds Orbital eigenvalues (eV) -42.49065 -40.57206 -39.66809 -37.77410 -37.45818 -35.81950 -34.08419 -32.70269 -31.67367 -30.65445 -28.52579 -27.20972 -25.56783 -23.92983 -23.55038 -22.56286 -21.12326 -20.80328 -20.28747 -18.73057 -18.62253 -18.39132 -17.06131 -16.84097 -16.56662 -16.21293 -15.82493 -15.53913 -15.27825 -15.24355 -14.93583 -14.81230 -14.73153 -14.38115 -14.20595 -14.05068 -13.96324 -13.44456 -13.40627 -13.28053 -13.11729 -13.08902 -13.01189 -12.64294 -12.43084 -11.96562 -11.91761 -11.89110 -11.50372 -11.26055 -11.06531 -10.93288 -10.36983 -10.11620 -9.68425 -9.17385 -4.81531 0.45024 1.39342 1.62528 1.62928 1.76386 1.77952 1.80452 2.08125 2.33238 2.40590 2.95906 3.53556 3.77400 3.80951 3.83009 3.85977 3.87871 4.12174 4.16243 4.24698 4.31260 4.36909 4.41677 4.42977 4.51560 4.59574 4.62347 4.64411 4.70177 4.79522 4.80952 4.86539 4.99210 5.06785 5.19008 5.22779 5.24694 5.31786 5.34390 5.43420 5.48442 5.64336 5.71782 5.95051 6.18632 6.53658 6.60387 6.72539 7.18915 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.068 3.932 2 N -0.417 5.417 3 C 0.044 3.956 4 C -0.182 4.182 5 C -0.051 4.051 6 O -0.562 6.562 7 Si 0.768 3.232 8 C -0.127 4.127 9 C -0.073 4.073 10 C 0.586 3.414 11 O -0.585 6.585 12 N -0.704 5.704 13 C 0.127 3.873 14 C -0.093 4.093 15 H 0.095 0.905 16 C -0.106 4.106 17 C -0.107 4.107 18 C 0.009 3.991 19 H 0.135 0.865 20 C 0.236 3.764 21 N -0.506 5.506 22 C -0.108 4.108 23 C -0.112 4.112 24 H 0.082 0.918 25 H 0.106 0.894 26 H 0.083 0.917 27 H 0.186 0.814 28 H 0.087 0.913 29 H 0.391 0.609 30 H -0.293 1.293 31 H -0.295 1.295 32 H 0.172 0.828 33 H 0.415 0.585 34 H 0.063 0.937 35 H 0.065 0.935 36 H 0.078 0.922 37 H 0.079 0.921 38 H 0.073 0.927 39 H 0.075 0.925 40 H 0.076 0.924 41 H 0.073 0.927 42 H 0.075 0.925 43 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.105 3.242 3.060 4.593 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 N -0.089 5.089 3 C -0.093 4.093 4 C -0.188 4.188 5 C -0.160 4.160 6 O -0.372 6.372 7 Si 0.673 3.327 8 C -0.153 4.153 9 C -0.185 4.185 10 C 0.375 3.625 11 O -0.467 6.467 12 N -0.356 5.356 13 C 0.004 3.996 14 C -0.112 4.112 15 H 0.113 0.887 16 C -0.144 4.144 17 C -0.145 4.145 18 C -0.012 4.012 19 H 0.153 0.847 20 C -0.081 4.081 21 N -0.183 5.183 22 C -0.147 4.147 23 C -0.150 4.150 24 H 0.100 0.900 25 H 0.124 0.876 26 H 0.102 0.898 27 H 0.203 0.797 28 H 0.105 0.895 29 H 0.241 0.759 30 H -0.220 1.220 31 H -0.222 1.222 32 H 0.189 0.811 33 H 0.253 0.747 34 H 0.082 0.918 35 H 0.083 0.917 36 H 0.097 0.903 37 H 0.097 0.903 38 H 0.092 0.908 39 H 0.094 0.906 40 H 0.095 0.905 41 H 0.091 0.909 42 H 0.093 0.907 43 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -0.803 1.401 2.501 2.977 hybrid contribution 0.152 1.434 -0.805 1.651 sum -0.651 2.835 1.696 3.367 Atomic orbital electron populations 1.22324 0.75087 1.05365 1.04499 1.44082 1.07596 1.05060 1.52207 1.22229 0.90138 0.92168 1.04770 1.18896 0.93394 0.93494 1.13018 1.24293 1.04837 0.97130 0.89764 1.86552 1.51270 1.54793 1.44549 0.94223 0.71996 0.80570 0.85874 1.21406 0.94919 0.94496 1.04520 1.20099 0.90684 0.87790 1.19966 1.17092 0.85421 0.84115 0.75893 1.90791 1.17558 1.85445 1.52903 1.45579 1.10660 1.05820 1.73554 1.21493 0.97399 0.78686 1.02037 1.21428 0.96104 0.94789 0.98886 0.88720 1.21458 0.97058 0.92232 1.03642 1.21530 0.97902 1.01131 0.93980 1.19276 0.88411 0.91479 1.02036 0.84730 1.29985 0.94127 0.92801 0.91155 1.81308 1.13646 1.12472 1.10858 1.21558 0.98792 0.91040 1.03311 1.21620 0.96773 0.99802 0.96800 0.89960 0.87577 0.89787 0.79730 0.89480 0.75863 1.22007 1.22197 0.81128 0.74736 0.91845 0.91684 0.90296 0.90273 0.90780 0.90615 0.90526 0.90863 0.90669 0.90636 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.00 10.44 127.77 1.33 1.34 16 2 N -0.42 -1.33 3.16 -534.33 -1.69 -3.02 16 3 C 0.04 0.07 11.28 83.48 0.94 1.01 16 4 C -0.18 -0.25 5.44 -20.12 -0.11 -0.36 16 5 C -0.05 0.08 2.99 71.24 0.21 0.30 16 6 O -0.56 -0.71 12.85 -148.98 -1.91 -2.62 16 7 Si 0.77 -2.70 30.64 68.60 2.10 -0.59 16 8 C -0.13 0.02 8.83 22.57 0.20 0.22 16 9 C -0.07 -0.25 6.89 40.35 0.28 0.03 16 10 C 0.59 2.36 7.78 86.45 0.67 3.03 16 11 O -0.58 -6.33 14.79 -4.32 -0.06 -6.39 16 12 N -0.70 2.66 5.26 -467.08 -2.46 0.21 16 13 C 0.13 -0.73 5.07 86.38 0.44 -0.30 16 14 C -0.09 1.04 2.22 -10.80 -0.02 1.02 16 15 H 0.09 -1.19 8.14 -2.38 -0.02 -1.21 16 16 C -0.11 1.21 5.20 30.59 0.16 1.37 16 17 C -0.11 1.07 5.16 30.59 0.16 1.22 16 18 C 0.01 -0.08 2.57 -12.60 -0.03 -0.11 16 19 H 0.14 -1.62 8.14 -2.38 -0.02 -1.64 16 20 C 0.24 0.20 14.65 89.44 1.31 1.51 16 21 N -0.51 -4.85 18.54 20.01 0.37 -4.47 16 22 C -0.11 1.08 5.16 30.61 0.16 1.24 16 23 C -0.11 1.27 5.08 30.61 0.16 1.42 16 24 H 0.08 -0.07 8.14 -2.39 -0.02 -0.09 16 25 H 0.11 -0.52 8.13 -2.39 -0.02 -0.54 16 26 H 0.08 0.32 6.61 -2.39 -0.02 0.30 16 27 H 0.19 -0.46 8.06 -2.91 -0.02 -0.49 16 28 H 0.09 -0.45 7.96 -2.39 -0.02 -0.47 16 29 H 0.39 -2.53 8.74 -74.06 -0.65 -3.17 16 30 H -0.29 -0.85 7.11 99.48 0.71 -0.15 16 31 H -0.29 -0.40 7.11 99.48 0.71 0.31 16 32 H 0.17 -1.12 5.77 -2.91 -0.02 -1.13 16 33 H 0.41 -3.71 6.56 -92.70 -0.61 -4.32 16 34 H 0.06 -0.21 8.14 -2.38 -0.02 -0.23 16 35 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 36 H 0.08 -0.88 8.14 -2.39 -0.02 -0.90 16 37 H 0.08 -0.94 8.14 -2.38 -0.02 -0.96 16 38 H 0.07 -0.69 8.14 -2.38 -0.02 -0.71 16 39 H 0.08 -0.70 8.14 -2.39 -0.02 -0.72 16 40 H 0.08 -0.76 8.14 -2.39 -0.02 -0.78 16 41 H 0.07 -0.66 8.14 -2.39 -0.02 -0.67 16 42 H 0.07 -0.82 8.14 -2.39 -0.02 -0.84 16 43 H 0.08 -0.87 7.18 -2.39 -0.02 -0.88 16 Total: 0.00 -25.51 354.93 2.01 -23.50 By element: Atomic # 1 Polarization: -19.37 SS G_CDS: -0.19 Total: -19.55 kcal Atomic # 6 Polarization: 7.10 SS G_CDS: 5.85 Total: 12.95 kcal Atomic # 7 Polarization: -3.51 SS G_CDS: -3.78 Total: -7.29 kcal Atomic # 8 Polarization: -7.04 SS G_CDS: -1.98 Total: -9.02 kcal Atomic # 14 Polarization: -2.70 SS G_CDS: 2.10 Total: -0.59 kcal Total: -25.51 2.01 -23.50 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16496578_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.601 kcal (2) G-P(sol) polarization free energy of solvation -25.510 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.909 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.011 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.500 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.898 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.00 seconds