Wall clock time and date at job start Sun Mar 7 2021 06:26:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13592 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 H 1.09000 * 109.47090 * 3.84202 * 3 2 1 5 5 C 1.53002 * 109.47021 * 123.83955 * 3 2 1 6 6 C 1.52996 * 109.46972 * 179.97438 * 5 3 2 7 7 C 1.53000 * 109.47114 * 299.99749 * 6 5 3 8 8 H 1.08996 * 109.47966 * 300.00526 * 7 6 5 9 9 C 1.53007 * 109.46791 * 179.97438 * 7 6 5 10 10 N 1.46504 * 109.46613 * 175.00244 * 9 7 6 11 11 C 1.34775 * 119.99708 * 180.02562 * 10 9 7 12 12 O 1.21287 * 120.00067 * 0.02562 * 11 10 9 13 13 C 1.50698 * 120.00364 * 180.02562 * 11 10 9 14 14 C 1.50696 * 109.47716 * 180.02562 * 13 11 10 15 15 C 1.38235 * 119.99693 * 269.72922 * 14 13 11 16 16 C 1.38235 * 120.00098 * 179.78646 * 15 14 13 17 17 C 1.38242 * 119.99633 * 0.45823 * 16 15 14 18 18 C 1.50696 * 119.99645 * 179.78856 * 17 16 15 19 19 O 1.42910 * 109.46627 * 119.97914 * 18 17 16 20 20 Si 1.86296 * 109.47482 * 359.97438 * 18 17 16 21 21 C 1.38230 * 120.00062 * 359.77079 * 17 16 15 22 22 C 1.38230 * 120.00453 * 89.99307 * 14 13 11 23 23 C 1.53002 * 109.46673 * 60.00467 * 7 6 5 24 24 C 1.52996 * 109.47343 * 299.99618 * 23 7 6 25 25 H 1.08996 * 109.47407 * 300.00412 * 5 3 2 26 26 H 1.09004 * 109.46733 * 59.99729 * 5 3 2 27 27 H 1.08996 * 109.47134 * 60.00785 * 6 5 3 28 28 H 1.09001 * 109.46993 * 180.02562 * 6 5 3 29 29 H 1.08992 * 109.47354 * 295.00668 * 9 7 6 30 30 H 1.08994 * 109.46790 * 55.01015 * 9 7 6 31 31 H 0.96994 * 120.00180 * 0.02562 * 10 9 7 32 32 H 1.09009 * 109.46717 * 300.00267 * 13 11 10 33 33 H 1.08998 * 109.47111 * 59.99551 * 13 11 10 34 34 H 1.08002 * 120.00150 * 359.97438 * 15 14 13 35 35 H 1.07995 * 120.00494 * 180.24760 * 16 15 14 36 36 H 1.08996 * 109.47569 * 239.97386 * 18 17 16 37 37 H 0.96697 * 113.99856 * 299.99787 * 19 18 17 38 38 H 1.48502 * 110.00155 * 179.97438 * 20 18 17 39 39 H 1.48500 * 110.00275 * 301.31642 * 20 18 17 40 40 H 1.07999 * 119.99934 * 179.97438 * 21 17 16 41 41 H 1.08007 * 119.99883 * 359.97438 * 22 14 13 42 42 H 1.09004 * 109.47059 * 60.00016 * 23 7 6 43 43 H 1.09004 * 109.46930 * 179.97438 * 23 7 6 44 44 H 1.09000 * 109.46870 * 300.00214 * 24 23 7 45 45 H 1.09001 * 109.47372 * 180.02562 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 1 2.9718 -1.0245 -0.0689 5 6 3.1176 0.8042 -1.1982 6 6 4.6476 0.8054 -1.1978 7 6 5.1567 1.4420 0.0969 8 1 4.7926 2.4671 0.1657 9 6 6.6868 1.4426 0.0975 10 7 7.1743 2.1579 1.2795 11 6 8.4992 2.2864 1.4905 12 8 9.2879 1.8103 0.7016 13 6 9.0009 3.0216 2.7065 14 6 10.5078 3.0235 2.7065 15 6 11.2002 2.0025 3.3303 16 6 12.5825 2.0018 3.3265 17 6 13.2725 3.0271 2.7070 18 6 14.7795 3.0288 2.7070 19 8 15.2557 3.0015 1.3599 20 14 15.4023 1.5269 3.6165 21 6 12.5801 4.0505 2.0873 22 6 11.1978 4.0488 2.0874 23 6 4.6471 0.6384 1.2951 24 6 3.1172 0.6372 1.2948 25 1 2.7544 0.3510 -2.1205 26 1 2.7537 1.8294 -1.1293 27 1 5.0117 -0.2196 -1.2665 28 1 5.0106 1.3782 -2.0511 29 1 7.0506 0.4154 0.1187 30 1 7.0502 1.9383 -0.8026 31 1 6.5436 2.5390 1.9102 32 1 8.6366 4.0488 2.6859 33 1 8.6378 2.5254 3.6065 34 1 10.6611 1.2038 3.8181 35 1 13.1235 1.2021 3.8104 36 1 15.1419 3.9296 3.2022 37 1 14.9712 2.2257 0.8578 38 1 16.8872 1.5166 3.6230 39 1 14.8879 1.5271 5.0095 40 1 13.1192 4.8517 1.6037 41 1 10.6568 4.8485 1.6033 42 1 5.0114 -0.3867 1.2264 43 1 5.0102 1.0917 2.2175 44 1 2.7530 1.6622 1.3634 45 1 2.7541 0.0650 2.1486 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16496578_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:12 Heat of formation + Delta-G solvation = -35.977170 kcal Electronic energy + Delta-G solvation = -24942.752508 eV Core-core repulsion = 21311.584179 eV Total energy + Delta-G solvation = -3631.168329 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.162 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -41.25005 -40.53796 -39.81752 -37.66251 -37.39463 -35.74784 -34.07516 -32.74327 -32.06065 -31.90630 -29.90195 -27.41401 -25.54286 -24.04965 -23.78176 -23.26107 -22.10128 -21.46501 -20.96670 -18.86196 -18.42415 -18.09715 -17.41282 -16.95803 -16.72734 -16.33904 -16.17869 -16.01033 -15.66108 -15.55303 -15.22052 -15.00502 -14.77502 -14.65804 -14.49772 -14.38683 -14.14672 -13.96112 -13.64151 -13.48199 -13.26022 -13.20100 -13.07698 -12.87536 -12.74287 -12.38208 -12.23651 -12.18825 -11.91621 -11.83755 -11.64722 -11.58599 -11.33874 -10.89448 -10.38991 -10.11510 -9.83123 -9.57349 -4.99325 0.27493 0.50051 1.33714 1.65361 1.65766 1.75621 1.78777 1.99318 2.11181 2.78815 2.81474 3.40692 3.44152 3.49212 3.52134 3.59252 3.77470 3.80386 3.87340 3.90843 3.98265 4.04736 4.07330 4.11665 4.20942 4.23282 4.24163 4.37168 4.48890 4.49594 4.55123 4.55379 4.61632 4.71562 4.76123 4.80876 4.87737 4.90497 4.93571 5.01557 5.05638 5.10245 5.19990 5.37540 5.41323 5.58108 5.61158 6.03250 6.42469 6.56627 6.62423 7.21863 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.432 5.432 2 C 0.205 3.795 3 C 0.008 3.992 4 H 0.115 0.885 5 C -0.111 4.111 6 C -0.110 4.110 7 C -0.103 4.103 8 H 0.082 0.918 9 C 0.123 3.877 10 N -0.733 5.733 11 C 0.513 3.487 12 O -0.526 6.526 13 C -0.104 4.104 14 C -0.063 4.063 15 C -0.100 4.100 16 C -0.116 4.116 17 C -0.119 4.119 18 C -0.068 4.068 19 O -0.541 6.541 20 Si 0.688 3.312 21 C -0.091 4.091 22 C -0.104 4.104 23 C -0.114 4.114 24 C -0.112 4.112 25 H 0.076 0.924 26 H 0.073 0.927 27 H 0.074 0.926 28 H 0.075 0.925 29 H 0.070 0.930 30 H 0.069 0.931 31 H 0.400 0.600 32 H 0.104 0.896 33 H 0.104 0.896 34 H 0.124 0.876 35 H 0.126 0.874 36 H 0.113 0.887 37 H 0.380 0.620 38 H -0.255 1.255 39 H -0.258 1.258 40 H 0.126 0.874 41 H 0.122 0.878 42 H 0.073 0.927 43 H 0.070 0.930 44 H 0.073 0.927 45 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.604 -0.687 1.497 1.754 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.107 5.107 2 C -0.113 4.113 3 C -0.014 4.014 4 H 0.133 0.867 5 C -0.150 4.150 6 C -0.149 4.149 7 C -0.122 4.122 8 H 0.100 0.900 9 C 0.000 4.000 10 N -0.387 5.387 11 C 0.299 3.701 12 O -0.401 6.401 13 C -0.144 4.144 14 C -0.064 4.064 15 C -0.118 4.118 16 C -0.133 4.133 17 C -0.119 4.119 18 C -0.179 4.179 19 O -0.346 6.346 20 Si 0.591 3.409 21 C -0.109 4.109 22 C -0.122 4.122 23 C -0.152 4.152 24 C -0.151 4.151 25 H 0.095 0.905 26 H 0.092 0.908 27 H 0.092 0.908 28 H 0.094 0.906 29 H 0.089 0.911 30 H 0.088 0.912 31 H 0.235 0.765 32 H 0.122 0.878 33 H 0.123 0.877 34 H 0.142 0.858 35 H 0.143 0.857 36 H 0.130 0.870 37 H 0.227 0.773 38 H -0.180 1.180 39 H -0.183 1.183 40 H 0.144 0.856 41 H 0.140 0.860 42 H 0.092 0.908 43 H 0.089 0.911 44 H 0.092 0.908 45 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -1.005 -0.789 1.776 2.188 hybrid contribution -0.266 0.806 0.319 0.906 sum -1.271 0.017 2.095 2.450 Atomic orbital electron populations 1.81284 1.13034 1.08400 1.08023 1.29236 0.95142 0.93407 0.93502 1.18973 0.81208 1.03173 0.98035 0.86675 1.21560 0.95993 1.00745 0.96695 1.21494 0.94291 1.02085 0.96982 1.21487 0.93868 1.00835 0.95991 0.90014 1.21411 0.93009 0.97480 0.88145 1.46033 1.07062 1.58417 1.27162 1.20544 0.82091 0.80175 0.87266 1.90765 1.55097 1.47588 1.46695 1.20693 0.93465 1.02623 0.97609 1.19262 0.93498 0.95336 0.98293 1.20903 0.93885 0.97730 0.99272 1.20942 0.94524 0.97806 1.00036 1.20326 0.95944 0.95874 0.99794 1.25047 0.92100 1.10739 0.90038 1.86490 1.75636 1.49418 1.23082 0.94616 0.80399 0.84914 0.81016 1.20952 0.93734 0.98056 0.98148 1.21014 0.94271 0.98320 0.98582 1.21618 0.94254 1.01300 0.97980 1.21570 0.96104 1.01840 0.95574 0.90519 0.90797 0.90754 0.90597 0.91143 0.91247 0.76504 0.87785 0.87730 0.85801 0.85672 0.87000 0.77275 1.18028 1.18335 0.85640 0.86024 0.90840 0.91123 0.90823 0.90659 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.73 18.54 42.15 0.78 -0.95 16 2 C 0.21 0.02 14.65 -20.76 -0.30 -0.28 16 3 C 0.01 -0.03 2.57 -93.40 -0.24 -0.27 16 4 H 0.12 -0.64 8.14 -51.93 -0.42 -1.06 16 5 C -0.11 0.51 5.16 -26.73 -0.14 0.37 16 6 C -0.11 0.57 5.20 -26.73 -0.14 0.43 16 7 C -0.10 0.55 2.23 -90.62 -0.20 0.35 16 8 H 0.08 -0.45 8.14 -51.93 -0.42 -0.87 16 9 C 0.12 -0.39 5.06 -4.04 -0.02 -0.41 16 10 N -0.73 2.45 5.28 -60.29 -0.32 2.13 16 11 C 0.51 -0.20 7.82 -10.99 -0.09 -0.29 16 12 O -0.53 -2.24 16.03 5.55 0.09 -2.15 16 13 C -0.10 0.27 5.83 -29.04 -0.17 0.10 16 14 C -0.06 -0.02 4.37 -104.63 -0.46 -0.48 16 15 C -0.10 -0.03 9.70 -39.58 -0.38 -0.42 16 16 C -0.12 -0.06 8.67 -39.58 -0.34 -0.40 16 17 C -0.12 -0.13 5.39 -104.63 -0.56 -0.70 16 18 C -0.07 -0.04 2.82 36.00 0.10 0.06 16 19 O -0.54 -0.68 12.77 -35.23 -0.45 -1.13 16 20 Si 0.69 -0.26 29.79 -169.99 -5.06 -5.33 16 21 C -0.09 -0.14 9.61 -39.59 -0.38 -0.52 16 22 C -0.10 -0.10 9.70 -39.59 -0.38 -0.48 16 23 C -0.11 0.65 5.08 -26.73 -0.14 0.52 16 24 C -0.11 0.55 5.16 -26.73 -0.14 0.42 16 25 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 26 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 27 H 0.07 -0.40 8.14 -51.93 -0.42 -0.82 16 28 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 29 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 30 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.40 -2.41 7.65 -40.82 -0.31 -2.72 16 32 H 0.10 -0.46 8.09 -51.92 -0.42 -0.88 16 33 H 0.10 -0.49 8.08 -51.93 -0.42 -0.91 16 34 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 35 H 0.13 -0.16 4.88 -52.49 -0.26 -0.42 16 36 H 0.11 0.09 7.96 -51.93 -0.41 -0.32 16 37 H 0.38 -0.86 8.70 45.56 0.40 -0.46 16 38 H -0.26 -0.70 7.11 56.52 0.40 -0.30 16 39 H -0.26 -0.43 7.11 56.52 0.40 -0.03 16 40 H 0.13 0.13 8.06 -52.49 -0.42 -0.29 16 41 H 0.12 -0.07 8.06 -52.48 -0.42 -0.49 16 42 H 0.07 -0.40 8.14 -51.93 -0.42 -0.82 16 43 H 0.07 -0.44 7.18 -51.93 -0.37 -0.81 16 44 H 0.07 -0.34 8.14 -51.93 -0.42 -0.76 16 45 H 0.07 -0.35 8.14 -51.93 -0.42 -0.77 16 LS Contribution 371.93 15.07 5.60 5.60 Total: 0.00 -10.32 371.93 -10.26 -20.57 By element: Atomic # 1 Polarization: -9.83 SS G_CDS: -6.91 Total: -16.75 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -3.98 Total: -2.00 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: 0.46 Total: 1.18 kcal Atomic # 8 Polarization: -2.92 SS G_CDS: -0.36 Total: -3.28 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: -5.06 Total: -5.33 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -10.32 -10.26 -20.57 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16496578_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.403 kcal (2) G-P(sol) polarization free energy of solvation -10.318 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.722 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.255 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.574 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.977 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds