Wall clock time and date at job start Sun Mar 7 2021 06:27:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.39288 * 121.03176 * 2 1 4 4 C 1.46503 * 134.19251 * 0.02562 * 3 2 1 5 5 C 1.50701 * 126.60134 * 359.97105 * 4 3 2 6 6 O 1.42901 * 109.47232 * 285.00278 * 5 4 3 7 7 Si 1.86299 * 109.46920 * 165.00256 * 5 4 3 8 8 C 1.34184 * 106.79609 * 180.23614 * 4 3 2 9 9 N 1.36948 * 109.95268 * 359.56973 * 8 4 3 10 10 C 1.37157 * 110.11446 * 0.44630 * 9 8 4 11 11 N 1.32823 * 132.96591 * 179.73835 * 10 9 8 12 12 C 1.31313 * 121.88796 * 179.97438 * 11 10 9 13 13 C 1.39752 * 121.03222 * 180.02562 * 2 1 3 14 14 C 1.47654 * 120.45676 * 359.96375 * 13 2 1 15 15 O 1.21574 * 120.00230 * 6.11184 * 14 13 2 16 16 N 1.34778 * 120.00078 * 186.10963 * 14 13 2 17 17 C 1.46507 * 119.99537 * 179.97438 * 16 14 13 18 18 C 1.53009 * 109.46665 * 179.97438 * 17 16 14 19 19 H 1.09002 * 109.47143 * 305.00203 * 18 17 16 20 20 C 1.53000 * 109.46826 * 65.00223 * 18 17 16 21 21 C 1.52998 * 109.47161 * 179.97438 * 20 18 17 22 22 C 1.53004 * 109.47155 * 299.99976 * 21 20 18 23 23 H 1.09002 * 109.46886 * 300.00482 * 22 21 20 24 24 C 1.47196 * 109.47047 * 179.97438 * 22 21 20 25 25 N 9.56384 * 116.91926 * 166.88233 * 12 1 2 26 26 C 1.52998 * 109.46740 * 59.99783 * 22 21 20 27 27 C 1.52995 * 109.47050 * 184.99992 * 18 17 16 28 28 H 1.08998 * 109.47020 * 96.41526 * 1 2 3 29 29 H 1.09003 * 109.46549 * 216.41177 * 1 2 3 30 30 H 1.08999 * 109.47234 * 336.40949 * 1 2 3 31 31 H 1.09001 * 109.46620 * 45.00302 * 5 4 3 32 32 H 0.96698 * 113.99862 * 300.00606 * 6 5 4 33 33 H 1.48496 * 109.99740 * 179.97438 * 7 5 4 34 34 H 1.48499 * 110.00136 * 301.32192 * 7 5 4 35 35 H 1.07999 * 125.02032 * 179.73832 * 8 4 3 36 36 H 0.96997 * 124.94172 * 180.20977 * 9 8 4 37 37 H 1.07997 * 119.30712 * 179.97438 * 12 11 10 38 38 H 0.96996 * 120.00387 * 0.02562 * 16 14 13 39 39 H 1.08999 * 109.47420 * 299.99966 * 17 16 14 40 40 H 1.09001 * 109.47170 * 60.00263 * 17 16 14 41 41 H 1.09000 * 109.47267 * 300.00181 * 20 18 17 42 42 H 1.09002 * 109.47276 * 60.00062 * 20 18 17 43 43 H 1.09002 * 109.47256 * 179.97438 * 21 20 18 44 44 H 1.09002 * 109.47282 * 59.99582 * 21 20 18 45 45 H 1.09007 * 109.47149 * 180.02562 * 26 22 21 46 46 H 1.09002 * 109.47378 * 60.00589 * 26 22 21 47 47 H 1.09002 * 109.47320 * 300.00103 * 27 18 17 48 48 H 1.09002 * 109.47166 * 60.00264 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8514 2.6101 0.0005 5 6 0.4524 3.1704 0.0005 6 8 -0.1193 3.0242 -1.3009 7 14 0.5067 4.9761 0.4557 8 6 2.9946 3.3127 -0.0051 9 7 4.0668 2.4606 0.0006 10 6 3.6347 1.1589 0.0001 11 7 4.2721 -0.0065 -0.0002 12 6 3.6267 -1.1501 -0.0001 13 6 2.2274 -1.1975 -0.0005 14 6 1.5226 -2.4950 -0.0003 15 8 0.3125 -2.5295 -0.1118 16 7 2.2209 -3.6411 0.1234 17 6 1.5214 -4.9284 0.1242 18 6 2.5385 -6.0614 0.2763 19 1 3.2947 -5.9780 -0.5044 20 6 3.2088 -5.9641 1.6481 21 6 4.2254 -7.0973 1.8005 22 6 3.5102 -8.4442 1.6768 23 1 2.7539 -8.5270 2.4573 24 6 4.4884 -9.5344 1.8228 25 7 5.2437 -10.3756 1.9344 26 6 2.8399 -8.5414 0.3049 27 6 1.8238 -7.4084 0.1522 28 1 -0.3633 -0.1148 -1.0212 29 1 -0.3632 -0.8271 0.6100 30 1 -0.3634 0.9418 0.4113 31 1 -0.1550 2.6306 0.7270 32 1 0.3705 3.4798 -1.9992 33 1 -0.8668 5.5406 0.4587 34 1 1.1284 5.1441 1.7938 35 1 3.0595 4.3907 -0.0103 36 1 4.9964 2.7375 0.0011 37 1 4.1871 -2.0733 -0.0008 38 1 3.1863 -3.6137 0.2127 39 1 0.8165 -4.9585 0.9550 40 1 0.9814 -5.0491 -0.8150 41 1 3.7179 -5.0044 1.7365 42 1 2.4526 -6.0475 2.4288 43 1 4.7033 -7.0277 2.7777 44 1 4.9816 -7.0144 1.0199 45 1 2.3299 -9.5008 0.2168 46 1 3.5961 -8.4585 -0.4758 47 1 1.0676 -7.4918 0.9329 48 1 1.3462 -7.4777 -0.8251 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16496578_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:27:21 Heat of formation + Delta-G solvation = 20.268223 kcal Electronic energy + Delta-G solvation = -30810.082974 eV Core-core repulsion = 26638.511907 eV Total energy + Delta-G solvation = -4171.571067 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.168 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -42.84703 -41.07196 -40.16929 -38.70627 -37.76761 -37.42047 -35.92410 -34.85559 -32.97534 -32.04171 -31.90848 -30.92531 -28.87614 -27.44756 -26.37830 -24.65759 -24.00975 -23.94891 -22.95827 -21.74253 -21.10311 -20.65642 -19.27753 -18.86833 -18.73405 -17.69215 -17.52687 -17.02214 -16.74308 -16.57593 -16.27182 -16.00456 -15.64427 -15.51795 -15.50214 -15.30016 -15.01880 -14.77438 -14.58998 -14.41371 -14.21176 -14.08505 -13.85404 -13.74698 -13.57027 -13.44966 -13.38650 -13.21872 -13.15267 -12.95062 -12.80804 -12.33871 -12.28003 -12.18079 -12.03459 -11.79519 -11.53342 -11.29423 -11.11916 -11.02469 -10.43371 -10.18814 -10.08427 -9.58719 -9.13448 -5.13979 -0.22594 -0.05851 1.22748 1.36916 1.56078 1.63906 1.78898 1.82009 1.93894 1.94461 2.11659 2.82620 2.85614 3.27026 3.43378 3.45344 3.47772 3.52461 3.56619 3.61419 3.72414 3.78263 3.87286 4.00162 4.07972 4.09298 4.16163 4.22436 4.25880 4.27776 4.28249 4.39642 4.54211 4.59922 4.64594 4.65238 4.78812 4.81445 4.85593 4.92121 4.94899 4.97653 4.99457 5.06208 5.09875 5.19553 5.24442 5.36567 5.41099 5.56591 5.77353 6.09226 6.46550 6.59943 6.60705 6.84949 7.25398 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 C 0.084 3.916 3 C -0.149 4.149 4 C -0.181 4.181 5 C -0.036 4.036 6 O -0.537 6.537 7 Si 0.685 3.315 8 C 0.069 3.931 9 N -0.570 5.570 10 C 0.307 3.693 11 N -0.504 5.504 12 C 0.180 3.820 13 C -0.234 4.234 14 C 0.571 3.429 15 O -0.529 6.529 16 N -0.729 5.729 17 C 0.124 3.876 18 C -0.104 4.104 19 H 0.083 0.917 20 C -0.115 4.115 21 C -0.112 4.112 22 C 0.007 3.993 23 H 0.115 0.885 24 C 0.206 3.794 25 N -0.433 5.433 26 C -0.111 4.111 27 C -0.110 4.110 28 H 0.088 0.912 29 H 0.096 0.904 30 H 0.067 0.933 31 H 0.116 0.884 32 H 0.378 0.622 33 H -0.252 1.252 34 H -0.255 1.255 35 H 0.186 0.814 36 H 0.426 0.574 37 H 0.162 0.838 38 H 0.398 0.602 39 H 0.072 0.928 40 H 0.072 0.928 41 H 0.070 0.930 42 H 0.073 0.927 43 H 0.075 0.925 44 H 0.073 0.927 45 H 0.076 0.924 46 H 0.074 0.926 47 H 0.074 0.926 48 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.319 5.620 -1.287 5.915 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.076 3.924 3 C -0.156 4.156 4 C -0.189 4.189 5 C -0.147 4.147 6 O -0.342 6.342 7 Si 0.586 3.414 8 C -0.057 4.057 9 N -0.176 5.176 10 C 0.074 3.926 11 N -0.217 5.217 12 C 0.011 3.989 13 C -0.241 4.241 14 C 0.359 3.641 15 O -0.406 6.406 16 N -0.381 5.381 17 C 0.001 3.999 18 C -0.123 4.123 19 H 0.101 0.899 20 C -0.153 4.153 21 C -0.151 4.151 22 C -0.014 4.014 23 H 0.133 0.867 24 C -0.112 4.112 25 N -0.108 5.108 26 C -0.150 4.150 27 C -0.148 4.148 28 H 0.106 0.894 29 H 0.114 0.886 30 H 0.086 0.914 31 H 0.134 0.866 32 H 0.225 0.775 33 H -0.177 1.177 34 H -0.180 1.180 35 H 0.203 0.797 36 H 0.264 0.736 37 H 0.179 0.821 38 H 0.234 0.766 39 H 0.090 0.910 40 H 0.090 0.910 41 H 0.089 0.911 42 H 0.092 0.908 43 H 0.093 0.907 44 H 0.092 0.908 45 H 0.095 0.905 46 H 0.092 0.908 47 H 0.092 0.908 48 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 1.909 4.740 -0.282 5.118 hybrid contribution 0.035 -0.223 0.218 0.314 sum 1.944 4.517 -0.064 4.918 Atomic orbital electron populations 1.21167 0.88742 1.03500 1.04406 1.19934 0.97148 0.89218 0.86122 1.19470 0.92800 0.93555 1.09763 1.20690 0.95342 0.91107 1.11729 1.24512 0.90401 1.10558 0.89229 1.86535 1.53606 1.77916 1.16126 0.95317 0.84450 0.76746 0.84888 1.21726 0.84980 0.95791 1.03195 1.41513 1.09613 1.02710 1.63722 1.18492 0.89335 0.85896 0.98868 1.66436 1.40572 0.96019 1.18681 1.22494 0.90078 0.94418 0.91877 1.20432 0.94738 0.93793 1.15172 1.17847 0.86808 0.83253 0.76230 1.90769 1.13562 1.87043 1.49272 1.45899 1.10782 1.05868 1.75596 1.21434 0.94665 0.80919 1.02877 1.21497 0.97841 0.94468 0.98464 0.89909 1.21628 0.98428 0.98194 0.97009 1.21574 0.98267 0.91823 1.03430 1.18974 0.93110 0.88447 1.00875 0.86686 1.29241 0.94279 0.94314 0.93405 1.81285 1.10330 1.10839 1.08355 1.21553 0.98865 0.99837 0.94732 1.21481 0.97644 0.92314 1.03365 0.89375 0.88558 0.91444 0.86648 0.77530 1.17679 1.17968 0.79726 0.73583 0.82149 0.76616 0.90967 0.90978 0.91110 0.90793 0.90667 0.90778 0.90542 0.90770 0.90756 0.90545 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.33 8.68 36.00 0.31 -0.02 16 2 C 0.08 0.23 5.98 -103.67 -0.62 -0.39 16 3 C -0.15 -0.32 6.16 -105.13 -0.65 -0.97 16 4 C -0.18 0.05 5.57 -102.72 -0.57 -0.52 16 5 C -0.04 0.03 2.06 36.01 0.07 0.10 16 6 O -0.54 0.19 12.88 -35.23 -0.45 -0.26 16 7 Si 0.68 -1.68 30.77 -169.99 -5.23 -6.91 16 8 C 0.07 -0.18 10.44 -16.69 -0.17 -0.36 16 9 N -0.57 0.82 6.04 -12.12 -0.07 0.75 16 10 C 0.31 0.54 8.42 -155.71 -1.31 -0.77 16 11 N -0.50 -1.02 10.37 -11.96 -0.12 -1.15 16 12 C 0.18 0.06 10.67 -17.11 -0.18 -0.12 16 13 C -0.23 -0.39 5.89 -104.82 -0.62 -1.00 16 14 C 0.57 0.93 7.72 -12.42 -0.10 0.83 16 15 O -0.53 -2.52 13.50 5.30 0.07 -2.45 16 16 N -0.73 1.39 5.24 -61.30 -0.32 1.07 16 17 C 0.12 -0.32 5.06 -4.03 -0.02 -0.34 16 18 C -0.10 0.50 2.23 -90.62 -0.20 0.30 16 19 H 0.08 -0.41 8.14 -51.93 -0.42 -0.84 16 20 C -0.11 0.58 5.08 -26.73 -0.14 0.44 16 21 C -0.11 0.49 5.16 -26.73 -0.14 0.35 16 22 C 0.01 -0.03 2.57 -93.41 -0.24 -0.27 16 23 H 0.12 -0.59 8.14 -51.93 -0.42 -1.01 16 24 C 0.21 0.10 14.64 -20.76 -0.30 -0.20 16 25 N -0.43 -1.89 18.54 42.15 0.78 -1.11 16 26 C -0.11 0.47 5.16 -26.76 -0.14 0.33 16 27 C -0.11 0.53 5.20 -26.76 -0.14 0.39 16 28 H 0.09 0.30 8.14 -51.93 -0.42 -0.12 16 29 H 0.10 0.36 5.97 -51.93 -0.31 0.05 16 30 H 0.07 0.14 5.05 -51.93 -0.26 -0.13 16 31 H 0.12 0.02 6.05 -51.93 -0.31 -0.29 16 32 H 0.38 -1.62 8.70 45.56 0.40 -1.22 16 33 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 34 H -0.26 0.00 7.11 56.52 0.40 0.41 16 35 H 0.19 -1.23 6.36 -52.49 -0.33 -1.56 16 36 H 0.43 -1.70 8.96 -40.82 -0.37 -2.06 16 37 H 0.16 -0.54 6.43 -52.49 -0.34 -0.88 16 38 H 0.40 -1.73 5.73 -40.82 -0.23 -1.96 16 39 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 41 H 0.07 -0.37 7.18 -51.93 -0.37 -0.75 16 42 H 0.07 -0.36 8.14 -51.93 -0.42 -0.78 16 43 H 0.07 -0.30 8.14 -51.93 -0.42 -0.73 16 44 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 45 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 46 H 0.07 -0.28 8.14 -51.93 -0.42 -0.71 16 47 H 0.07 -0.38 8.14 -51.93 -0.42 -0.80 16 48 H 0.08 -0.35 8.14 -51.93 -0.42 -0.78 16 LS Contribution 386.35 15.07 5.82 5.82 Total: 0.00 -11.95 386.35 -11.08 -23.04 By element: Atomic # 1 Polarization: -10.19 SS G_CDS: -6.40 Total: -16.59 kcal Atomic # 6 Polarization: 2.94 SS G_CDS: -5.15 Total: -2.21 kcal Atomic # 7 Polarization: -0.70 SS G_CDS: 0.26 Total: -0.43 kcal Atomic # 8 Polarization: -2.33 SS G_CDS: -0.38 Total: -2.71 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.23 Total: -6.91 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -11.95 -11.08 -23.04 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16496578_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.305 kcal (2) G-P(sol) polarization free energy of solvation -11.954 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.350 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.082 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.037 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.268 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds