Wall clock time and date at job start Sun Mar 7 2021 06:29:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13592 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 H 1.09000 * 109.47090 * 3.84202 * 3 2 1 5 5 C 1.53002 * 109.47021 * 123.83955 * 3 2 1 6 6 C 1.52996 * 109.46972 * 179.97438 * 5 3 2 7 7 C 1.53000 * 109.47114 * 299.99749 * 6 5 3 8 8 H 1.08996 * 109.47966 * 300.00526 * 7 6 5 9 9 C 1.53007 * 109.46791 * 179.97438 * 7 6 5 10 10 N 1.46504 * 109.46613 * 175.00244 * 9 7 6 11 11 C 1.34775 * 119.99708 * 180.02562 * 10 9 7 12 12 O 1.21287 * 120.00067 * 0.02562 * 11 10 9 13 13 C 1.50698 * 120.00364 * 180.02562 * 11 10 9 14 14 C 1.52996 * 109.47445 * 180.02562 * 13 11 10 15 15 O 1.42903 * 109.47094 * 179.97438 * 14 13 11 16 16 C 1.35902 * 116.99900 * 179.97438 * 15 14 13 17 17 C 1.38725 * 120.05558 * 359.73092 * 16 15 14 18 18 C 1.38150 * 119.94239 * 179.73954 * 17 16 15 19 19 C 1.38260 * 120.05356 * 0.51015 * 18 17 16 20 20 C 1.50703 * 119.94486 * 179.74313 * 19 18 17 21 21 O 1.42893 * 109.47199 * 245.02283 * 20 19 18 22 22 Si 1.86301 * 109.46855 * 5.02426 * 20 19 18 23 23 C 1.38262 * 120.11570 * 359.76392 * 19 18 17 24 24 C 1.38146 * 120.05331 * 359.97438 * 23 19 18 25 25 C 1.53002 * 109.46673 * 60.00467 * 7 6 5 26 26 C 1.52996 * 109.47343 * 299.99618 * 25 7 6 27 27 H 1.08996 * 109.47407 * 300.00412 * 5 3 2 28 28 H 1.09004 * 109.46733 * 59.99729 * 5 3 2 29 29 H 1.08996 * 109.47134 * 60.00785 * 6 5 3 30 30 H 1.09001 * 109.46993 * 180.02562 * 6 5 3 31 31 H 1.08992 * 109.47354 * 295.00668 * 9 7 6 32 32 H 1.08994 * 109.46790 * 55.01015 * 9 7 6 33 33 H 0.96994 * 120.00180 * 0.02562 * 10 9 7 34 34 H 1.09009 * 109.46717 * 300.00267 * 13 11 10 35 35 H 1.08998 * 109.47111 * 59.99551 * 13 11 10 36 36 H 1.08998 * 109.46746 * 299.99369 * 14 13 11 37 37 H 1.08994 * 109.47129 * 60.00068 * 14 13 11 38 38 H 1.08004 * 120.02869 * 359.97438 * 17 16 15 39 39 H 1.07999 * 119.97161 * 180.23405 * 18 17 16 40 40 H 1.09001 * 109.47449 * 125.01943 * 20 19 18 41 41 H 0.96702 * 114.00145 * 180.02562 * 21 20 19 42 42 H 1.48501 * 109.99949 * 178.68221 * 22 20 19 43 43 H 1.48501 * 109.99857 * 299.99947 * 22 20 19 44 44 H 1.08001 * 119.97634 * 179.97438 * 23 19 18 45 45 H 1.08006 * 120.03016 * 179.97438 * 24 23 19 46 46 H 1.09004 * 109.47059 * 60.00016 * 25 7 6 47 47 H 1.09004 * 109.46930 * 179.97438 * 25 7 6 48 48 H 1.09000 * 109.46870 * 300.00214 * 26 25 7 49 49 H 1.09001 * 109.47372 * 180.02562 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 1 2.9718 -1.0245 -0.0689 5 6 3.1176 0.8042 -1.1982 6 6 4.6476 0.8054 -1.1978 7 6 5.1567 1.4420 0.0969 8 1 4.7926 2.4671 0.1657 9 6 6.6868 1.4426 0.0975 10 7 7.1743 2.1579 1.2795 11 6 8.4992 2.2864 1.4905 12 8 9.2879 1.8103 0.7016 13 6 9.0009 3.0216 2.7065 14 6 10.5308 3.0234 2.7064 15 8 11.0064 3.7212 3.8593 16 6 12.3536 3.8144 4.0118 17 6 13.2003 3.2413 3.0742 18 6 14.5694 3.3422 3.2288 19 6 15.0959 4.0045 4.3223 20 6 16.5898 4.1081 4.4914 21 8 16.9880 3.3881 5.6597 22 14 17.4355 3.3843 2.9975 23 6 14.2542 4.5717 5.2611 24 6 12.8844 4.4783 5.1083 25 6 4.6471 0.6384 1.2951 26 6 3.1172 0.6372 1.2948 27 1 2.7544 0.3510 -2.1205 28 1 2.7537 1.8294 -1.1293 29 1 5.0117 -0.2196 -1.2665 30 1 5.0106 1.3782 -2.0511 31 1 7.0506 0.4154 0.1187 32 1 7.0502 1.9383 -0.8026 33 1 6.5436 2.5390 1.9102 34 1 8.6366 4.0488 2.6859 35 1 8.6378 2.5254 3.6065 36 1 10.8953 1.9964 2.7269 37 1 10.8935 3.5200 1.8065 38 1 12.7895 2.7200 2.2222 39 1 15.2290 2.8995 2.4971 40 1 16.8719 5.1557 4.5965 41 1 17.9393 3.4120 5.8314 42 1 18.9087 3.5091 3.1377 43 1 17.0592 1.9561 2.8431 44 1 14.6679 5.0882 6.1147 45 1 12.2272 4.9211 5.8422 46 1 5.0114 -0.3867 1.2264 47 1 5.0102 1.0917 2.2175 48 1 2.7530 1.6622 1.3634 49 1 2.7541 0.0650 2.1486 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16496578_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:29:49 Heat of formation + Delta-G solvation = -69.997459 kcal Electronic energy + Delta-G solvation = -28252.406940 eV Core-core repulsion = 24145.543570 eV Total energy + Delta-G solvation = -4106.863370 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.177 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -41.36443 -40.85625 -39.92892 -39.06638 -37.52561 -37.34806 -35.73686 -33.52803 -32.50137 -31.97211 -31.69408 -31.42558 -27.66933 -26.35240 -25.29267 -23.72874 -23.52355 -22.75550 -22.02452 -21.40532 -20.69233 -19.47617 -18.67913 -18.53807 -17.82804 -17.46220 -17.30419 -16.80629 -16.76007 -16.43722 -15.94576 -15.65592 -15.53743 -15.27593 -15.08036 -14.87119 -14.64040 -14.60180 -14.40840 -14.26193 -14.17909 -14.03290 -13.86979 -13.69064 -13.39090 -13.11747 -13.04961 -12.89596 -12.75738 -12.64607 -12.41183 -11.99574 -11.99074 -11.94358 -11.70929 -11.66875 -11.52815 -11.26739 -11.02493 -10.90930 -10.46706 -10.05082 -10.02138 -9.19501 -4.93477 0.28866 0.32380 1.30802 1.58255 1.60679 1.75366 1.78101 1.78352 1.93612 2.57585 2.63153 2.93737 3.43612 3.62197 3.75769 3.79562 3.80810 3.82692 3.83970 3.94973 3.95312 4.07605 4.14373 4.27465 4.29668 4.35405 4.40145 4.43688 4.49009 4.51019 4.56861 4.61804 4.69194 4.72825 4.79461 4.82045 4.86186 4.96932 4.98480 5.05745 5.19915 5.20187 5.21716 5.29396 5.29934 5.31907 5.43134 5.48208 5.51754 5.62710 5.72764 6.34170 6.54239 6.58209 6.61310 7.24019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.506 5.506 2 C 0.236 3.764 3 C 0.009 3.991 4 H 0.136 0.864 5 C -0.107 4.107 6 C -0.107 4.107 7 C -0.093 4.093 8 H 0.090 0.910 9 C 0.123 3.877 10 N -0.714 5.714 11 C 0.518 3.482 12 O -0.586 6.586 13 C -0.133 4.133 14 C 0.071 3.929 15 O -0.320 6.320 16 C 0.124 3.876 17 C -0.209 4.209 18 C -0.084 4.084 19 C -0.125 4.125 20 C -0.077 4.077 21 O -0.559 6.559 22 Si 0.755 3.245 23 C -0.060 4.060 24 C -0.158 4.158 25 C -0.110 4.110 26 C -0.108 4.108 27 H 0.074 0.926 28 H 0.071 0.929 29 H 0.079 0.921 30 H 0.075 0.925 31 H 0.062 0.938 32 H 0.059 0.941 33 H 0.418 0.582 34 H 0.127 0.873 35 H 0.126 0.874 36 H 0.062 0.938 37 H 0.067 0.933 38 H 0.141 0.859 39 H 0.139 0.861 40 H 0.097 0.903 41 H 0.394 0.606 42 H -0.284 1.284 43 H -0.302 1.302 44 H 0.142 0.858 45 H 0.145 0.855 46 H 0.075 0.925 47 H 0.080 0.920 48 H 0.073 0.927 49 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.495 3.354 -0.208 3.678 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.183 5.183 2 C -0.081 4.081 3 C -0.012 4.012 4 H 0.153 0.847 5 C -0.146 4.146 6 C -0.145 4.145 7 C -0.112 4.112 8 H 0.108 0.892 9 C -0.001 4.001 10 N -0.366 5.366 11 C 0.305 3.695 12 O -0.467 6.467 13 C -0.173 4.173 14 C -0.005 4.005 15 O -0.234 6.234 16 C 0.078 3.922 17 C -0.228 4.228 18 C -0.101 4.101 19 C -0.125 4.125 20 C -0.186 4.186 21 O -0.369 6.369 22 Si 0.661 3.339 23 C -0.078 4.078 24 C -0.176 4.176 25 C -0.148 4.148 26 C -0.147 4.147 27 H 0.093 0.907 28 H 0.090 0.910 29 H 0.098 0.902 30 H 0.094 0.906 31 H 0.080 0.920 32 H 0.077 0.923 33 H 0.255 0.745 34 H 0.145 0.855 35 H 0.144 0.856 36 H 0.081 0.919 37 H 0.086 0.914 38 H 0.159 0.841 39 H 0.156 0.844 40 H 0.115 0.885 41 H 0.244 0.756 42 H -0.211 1.211 43 H -0.230 1.230 44 H 0.160 0.840 45 H 0.163 0.837 46 H 0.094 0.906 47 H 0.099 0.901 48 H 0.092 0.908 49 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 0.055 2.376 -0.927 2.551 hybrid contribution 0.665 -0.369 1.028 1.279 sum 0.720 2.007 0.101 2.135 Atomic orbital electron populations 1.81305 1.15387 1.11006 1.10581 1.29994 0.95769 0.91128 0.91232 1.19284 0.78437 1.04647 0.98852 0.84655 1.21528 0.96336 1.00479 0.96263 1.21469 0.93626 1.02462 0.96987 1.21409 0.92065 1.01481 0.96209 0.89179 1.21436 0.94413 0.96741 0.87474 1.45883 1.06394 1.57097 1.27264 1.20586 0.82830 0.79368 0.86742 1.90747 1.56471 1.50592 1.48875 1.21442 0.93680 1.04404 0.97752 1.22480 0.94750 0.96603 0.86618 1.85957 1.18929 1.72821 1.45654 1.19158 0.82397 0.95651 0.94968 1.21390 0.94033 1.05718 1.01650 1.20974 0.94968 0.96879 0.97295 1.19395 0.94395 1.01993 0.96708 1.24876 0.95472 1.00982 0.97293 1.86550 1.30335 1.75837 1.44149 0.94224 0.76732 0.80188 0.82750 1.21008 0.91846 0.96970 0.97995 1.20682 0.95534 1.03328 0.98094 1.21601 0.93516 1.01505 0.98145 1.21548 0.96529 1.01742 0.94879 0.90695 0.91001 0.90242 0.90596 0.91961 0.92304 0.74454 0.85485 0.85601 0.91919 0.91435 0.84126 0.84401 0.88520 0.75555 1.21090 1.23047 0.83983 0.83717 0.90612 0.90117 0.90820 0.90663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.51 -4.69 18.54 20.01 0.37 -4.32 16 2 C 0.24 0.11 14.65 89.44 1.31 1.42 16 3 C 0.01 -0.08 2.57 -12.60 -0.03 -0.12 16 4 H 0.14 -1.72 8.14 -2.39 -0.02 -1.74 16 5 C -0.11 1.09 5.16 30.59 0.16 1.24 16 6 C -0.11 1.25 5.20 30.59 0.16 1.41 16 7 C -0.09 1.14 2.23 -10.79 -0.02 1.11 16 8 H 0.09 -1.18 8.14 -2.39 -0.02 -1.20 16 9 C 0.12 -0.91 5.06 86.38 0.44 -0.47 16 10 N -0.71 5.73 5.28 -463.05 -2.45 3.28 16 11 C 0.52 -0.95 7.83 87.66 0.69 -0.26 16 12 O -0.59 -4.55 15.98 -3.05 -0.05 -4.60 16 13 C -0.13 0.80 6.07 29.85 0.18 0.98 16 14 C 0.07 0.00 4.03 71.98 0.29 0.29 16 15 O -0.32 -0.97 10.14 -92.44 -0.94 -1.90 16 16 C 0.12 0.59 6.69 22.50 0.15 0.74 16 17 C -0.21 -0.87 9.04 22.37 0.20 -0.67 16 18 C -0.08 -0.31 8.66 22.25 0.19 -0.12 16 19 C -0.12 -0.47 5.38 -19.85 -0.11 -0.58 16 20 C -0.08 -0.03 2.79 71.24 0.20 0.17 16 21 O -0.56 -1.70 12.81 -148.98 -1.91 -3.61 16 22 Si 0.75 -0.41 29.85 68.60 2.05 1.63 16 23 C -0.06 -0.20 9.68 22.25 0.22 0.01 16 24 C -0.16 -0.57 9.99 22.37 0.22 -0.35 16 25 C -0.11 1.44 5.08 30.59 0.16 1.60 16 26 C -0.11 1.20 5.16 30.59 0.16 1.36 16 27 H 0.07 -0.69 8.14 -2.39 -0.02 -0.71 16 28 H 0.07 -0.66 8.14 -2.39 -0.02 -0.68 16 29 H 0.08 -0.97 8.14 -2.39 -0.02 -0.99 16 30 H 0.08 -0.83 8.14 -2.39 -0.02 -0.85 16 31 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 32 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 33 H 0.42 -5.87 7.65 -92.71 -0.71 -6.58 16 34 H 0.13 -1.24 8.14 -2.38 -0.02 -1.26 16 35 H 0.13 -1.21 8.14 -2.39 -0.02 -1.23 16 36 H 0.06 0.12 7.61 -2.39 -0.02 0.10 16 37 H 0.07 0.08 7.63 -2.39 -0.02 0.06 16 38 H 0.14 0.29 6.30 -2.91 -0.02 0.27 16 39 H 0.14 0.09 4.86 -2.91 -0.01 0.07 16 40 H 0.10 -0.39 7.96 -2.39 -0.02 -0.40 16 41 H 0.39 -2.02 8.74 -74.06 -0.65 -2.67 16 42 H -0.28 -0.87 7.11 99.48 0.71 -0.16 16 43 H -0.30 -2.16 7.05 99.48 0.70 -1.46 16 44 H 0.14 0.06 8.06 -2.91 -0.02 0.03 16 45 H 0.15 0.06 8.06 -2.91 -0.02 0.04 16 46 H 0.08 -0.96 8.14 -2.39 -0.02 -0.98 16 47 H 0.08 -1.17 7.18 -2.38 -0.02 -1.19 16 48 H 0.07 -0.78 8.14 -2.39 -0.02 -0.79 16 49 H 0.07 -0.78 8.14 -2.39 -0.02 -0.80 16 Total: 0.00 -26.72 401.90 1.28 -25.44 By element: Atomic # 1 Polarization: -23.36 SS G_CDS: -0.35 Total: -23.71 kcal Atomic # 6 Polarization: 3.22 SS G_CDS: 4.55 Total: 7.78 kcal Atomic # 7 Polarization: 1.04 SS G_CDS: -2.08 Total: -1.04 kcal Atomic # 8 Polarization: -7.21 SS G_CDS: -2.89 Total: -10.11 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: 2.05 Total: 1.63 kcal Total: -26.72 1.28 -25.44 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16496578_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.557 kcal (2) G-P(sol) polarization free energy of solvation -26.720 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.279 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.441 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.997 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds