Wall clock time and date at job start Sun Mar 7 2021 06:30:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 H 1.09001 * 109.46954 * 342.24906 * 3 2 1 5 5 C 1.52999 * 109.47158 * 102.24311 * 3 2 1 6 6 C 1.52994 * 109.47334 * 179.97438 * 5 3 2 7 7 C 1.53003 * 109.47219 * 300.00507 * 6 5 3 8 8 H 1.09000 * 109.46667 * 299.99455 * 7 6 5 9 9 C 1.52994 * 109.47219 * 179.97438 * 7 6 5 10 10 N 1.46497 * 109.47544 * 64.99683 * 9 7 6 11 11 C 1.34773 * 120.00243 * 180.02562 * 10 9 7 12 12 O 1.21284 * 120.00280 * 359.97438 * 11 10 9 13 13 C 1.50697 * 120.00225 * 180.02562 * 11 10 9 14 14 C 1.52994 * 109.47525 * 179.97438 * 13 11 10 15 15 O 1.42905 * 109.47453 * 179.97438 * 14 13 11 16 16 C 1.35901 * 117.00063 * 180.02562 * 15 14 13 17 17 C 1.38713 * 120.05607 * 179.97438 * 16 15 14 18 18 C 1.38165 * 119.94238 * 179.97438 * 17 16 15 19 19 C 1.50699 * 119.96726 * 180.02562 * 18 17 16 20 20 O 1.42894 * 109.47399 * 64.99941 * 19 18 17 21 21 Si 1.86305 * 109.46829 * 185.00129 * 19 18 17 22 22 C 1.38245 * 120.05717 * 359.97438 * 18 17 16 23 23 C 1.38286 * 120.11203 * 0.02562 * 22 18 17 24 24 C 1.38119 * 120.05454 * 359.97438 * 23 22 18 25 25 C 1.52999 * 109.47381 * 59.99523 * 7 6 5 26 26 C 1.52996 * 109.46824 * 222.24379 * 3 2 1 27 27 H 1.09000 * 109.47572 * 300.00316 * 5 3 2 28 28 H 1.09010 * 109.46777 * 59.99814 * 5 3 2 29 29 H 1.08996 * 109.47258 * 180.02562 * 6 5 3 30 30 H 1.09000 * 109.46856 * 59.99846 * 6 5 3 31 31 H 1.09007 * 109.47128 * 304.99702 * 9 7 6 32 32 H 1.09003 * 109.47267 * 185.00171 * 9 7 6 33 33 H 0.97005 * 119.99769 * 359.97438 * 10 9 7 34 34 H 1.08997 * 109.47527 * 59.99401 * 13 11 10 35 35 H 1.09003 * 109.47084 * 299.99878 * 13 11 10 36 36 H 1.09007 * 109.47128 * 59.99820 * 14 13 11 37 37 H 1.08998 * 109.47282 * 299.99808 * 14 13 11 38 38 H 1.07994 * 120.02419 * 0.25672 * 17 16 15 39 39 H 1.09005 * 109.47415 * 304.99564 * 19 18 17 40 40 H 0.96705 * 113.99954 * 60.00047 * 20 19 18 41 41 H 1.48499 * 109.99900 * 58.68193 * 21 19 18 42 42 H 1.48506 * 109.99755 * 179.97438 * 21 19 18 43 43 H 1.07999 * 119.94068 * 179.97438 * 22 18 17 44 44 H 1.08000 * 119.97222 * 180.02562 * 23 22 18 45 45 H 1.08010 * 120.02819 * 180.02562 * 24 23 22 46 46 H 1.09001 * 109.46702 * 59.99812 * 25 7 6 47 47 H 1.08996 * 109.47162 * 180.02562 * 25 7 6 48 48 H 1.09004 * 109.47283 * 60.00431 * 26 3 2 49 49 H 1.08994 * 109.47448 * 299.99990 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 1 2.9718 -0.9779 0.3133 5 6 3.1179 0.3068 -1.4097 6 6 4.6479 0.3081 -1.4096 7 6 5.1569 1.3765 -0.4399 8 1 4.7928 2.3548 -0.7535 9 6 6.6869 1.3774 -0.4393 10 7 7.1756 1.7867 -1.7583 11 6 8.5007 1.8599 -1.9931 12 8 9.2886 1.5874 -1.1124 13 6 9.0033 2.2816 -3.3498 14 6 10.5333 2.2823 -3.3492 15 8 11.0099 2.6816 -4.6359 16 6 12.3573 2.7345 -4.8056 17 6 12.8890 3.1137 -6.0294 18 6 14.2592 3.1671 -6.1992 19 6 14.8374 3.5796 -7.5283 20 8 14.4938 4.9406 -7.7956 21 14 16.6917 3.4053 -7.4796 22 6 15.1000 2.8437 -5.1506 23 6 14.5723 2.4653 -3.9296 24 6 13.2034 2.4103 -3.7548 25 6 4.6471 1.0704 0.9698 26 6 3.1175 1.0687 0.9698 27 1 2.7549 -0.4541 -2.1006 28 1 2.7541 1.2854 -1.7231 29 1 5.0111 0.5266 -2.4137 30 1 5.0120 -0.6702 -1.0960 31 1 7.0507 0.3753 -0.2119 32 1 7.0496 2.0754 0.3153 33 1 6.5453 2.0044 -2.4629 34 1 8.6399 3.2838 -3.5766 35 1 8.6403 1.5841 -4.1047 36 1 10.8971 1.2801 -3.1223 37 1 10.8960 2.9801 -2.5945 38 1 12.2326 3.3713 -6.8473 39 1 14.4331 2.9416 -8.3142 40 1 14.8219 5.5661 -7.1352 41 1 17.0618 2.0007 -7.1710 42 1 17.2741 3.8084 -8.7849 43 1 16.1707 2.8857 -5.2855 44 1 15.2313 2.2135 -3.1118 45 1 12.7917 2.1151 -2.8008 46 1 5.0112 0.0920 1.2833 47 1 5.0094 1.8318 1.6605 48 1 2.7543 0.8506 1.9741 49 1 2.7538 2.0472 0.6564 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16496578_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:30:03 Heat of formation + Delta-G solvation = -72.522125 kcal Electronic energy + Delta-G solvation = -28311.514306 eV Core-core repulsion = 24204.541459 eV Total energy + Delta-G solvation = -4106.972848 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.177 amu Computer time = 1.79 seconds Orbital eigenvalues (eV) -41.40996 -40.99980 -40.15839 -39.07973 -37.51009 -37.23262 -35.86027 -33.58174 -32.60451 -32.42495 -32.07529 -30.79509 -27.82123 -26.89876 -25.17801 -24.05980 -23.64804 -23.15047 -22.03335 -21.57187 -21.02808 -19.33567 -18.87222 -18.17304 -17.67691 -17.54838 -17.23271 -17.06440 -16.79500 -16.61074 -16.20857 -15.98944 -15.59255 -15.39971 -15.28764 -15.02279 -14.84371 -14.76886 -14.44434 -14.38487 -14.26316 -14.11445 -13.92213 -13.52553 -13.47794 -13.27931 -13.18599 -12.97480 -12.84971 -12.81516 -12.40458 -12.36016 -12.25818 -11.95592 -11.87809 -11.81133 -11.61978 -11.60382 -11.36717 -11.02755 -10.46376 -10.22912 -9.89788 -9.21617 -5.01464 0.24569 0.43754 1.28796 1.49046 1.65191 1.67563 1.74712 1.77764 1.98807 2.44266 2.70830 2.77396 3.37961 3.41641 3.46032 3.47615 3.50673 3.66210 3.77182 3.79706 3.83345 3.89810 3.94429 4.03903 4.07096 4.09209 4.17819 4.21398 4.22692 4.27905 4.33749 4.44734 4.51096 4.52133 4.56510 4.58074 4.60196 4.71211 4.71838 4.79115 4.84908 4.87953 4.90953 5.00136 5.02463 5.16027 5.27661 5.29448 5.40713 5.47142 5.71222 6.27702 6.39474 6.55685 6.57758 7.04576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.432 5.432 2 C 0.205 3.795 3 C 0.008 3.992 4 H 0.115 0.885 5 C -0.112 4.112 6 C -0.115 4.115 7 C -0.103 4.103 8 H 0.082 0.918 9 C 0.122 3.878 10 N -0.728 5.728 11 C 0.520 3.480 12 O -0.538 6.538 13 C -0.142 4.142 14 C 0.074 3.926 15 O -0.316 6.316 16 C 0.132 3.868 17 C -0.126 4.126 18 C -0.082 4.082 19 C -0.069 4.069 20 O -0.539 6.539 21 Si 0.690 3.310 22 C -0.154 4.154 23 C -0.073 4.073 24 C -0.202 4.202 25 C -0.110 4.110 26 C -0.111 4.111 27 H 0.075 0.925 28 H 0.073 0.927 29 H 0.070 0.930 30 H 0.073 0.927 31 H 0.072 0.928 32 H 0.071 0.929 33 H 0.403 0.597 34 H 0.107 0.893 35 H 0.107 0.893 36 H 0.072 0.928 37 H 0.073 0.927 38 H 0.133 0.867 39 H 0.115 0.885 40 H 0.379 0.621 41 H -0.258 1.258 42 H -0.255 1.255 43 H 0.128 0.872 44 H 0.131 0.869 45 H 0.133 0.867 46 H 0.074 0.926 47 H 0.076 0.924 48 H 0.076 0.924 49 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.253 1.120 1.691 3.032 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.107 5.107 2 C -0.113 4.113 3 C -0.014 4.014 4 H 0.133 0.867 5 C -0.151 4.151 6 C -0.152 4.152 7 C -0.122 4.122 8 H 0.101 0.899 9 C -0.001 4.001 10 N -0.381 5.381 11 C 0.306 3.694 12 O -0.415 6.415 13 C -0.182 4.182 14 C -0.001 4.001 15 O -0.230 6.230 16 C 0.087 3.913 17 C -0.144 4.144 18 C -0.083 4.083 19 C -0.180 4.180 20 O -0.344 6.344 21 Si 0.592 3.408 22 C -0.172 4.172 23 C -0.091 4.091 24 C -0.221 4.221 25 C -0.148 4.148 26 C -0.150 4.150 27 H 0.094 0.906 28 H 0.092 0.908 29 H 0.089 0.911 30 H 0.092 0.908 31 H 0.090 0.910 32 H 0.090 0.910 33 H 0.238 0.762 34 H 0.126 0.874 35 H 0.125 0.875 36 H 0.090 0.910 37 H 0.091 0.909 38 H 0.151 0.849 39 H 0.132 0.868 40 H 0.227 0.773 41 H -0.182 1.182 42 H -0.180 1.180 43 H 0.146 0.854 44 H 0.149 0.851 45 H 0.150 0.850 46 H 0.093 0.907 47 H 0.094 0.906 48 H 0.095 0.905 49 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 1.352 0.286 1.344 1.928 hybrid contribution -0.579 -0.309 -0.177 0.680 sum 0.773 -0.023 1.167 1.400 Atomic orbital electron populations 1.81290 1.13016 1.08344 1.08027 1.29229 0.95133 0.93435 0.93518 1.18968 0.81236 1.02719 0.98462 0.86686 1.21572 0.96036 1.03291 0.94200 1.21623 0.94349 0.99613 0.99629 1.21492 0.93705 1.00351 0.96675 0.89918 1.21456 0.93190 1.01174 0.84318 1.45967 1.06903 1.70019 1.15213 1.20273 0.82437 0.77198 0.89504 1.90761 1.55216 1.48857 1.46645 1.21470 0.95500 1.05357 0.95876 1.22416 0.93091 1.01283 0.83330 1.85977 1.19225 1.83454 1.34375 1.18959 0.82071 0.96024 0.94223 1.20244 0.94519 1.03764 0.95896 1.20126 0.93192 0.99054 0.95925 1.25103 1.11478 0.86007 0.95395 1.86513 1.80660 1.14911 1.52319 0.94657 0.75756 0.85094 0.85276 1.20908 0.98937 1.03832 0.93484 1.20932 0.94422 0.96673 0.97092 1.21396 0.94465 1.06981 0.99249 1.21487 0.94356 1.03246 0.95750 1.21552 0.95950 0.98402 0.99097 0.90623 0.90786 0.91109 0.90820 0.90990 0.91038 0.76217 0.87444 0.87482 0.90951 0.90881 0.84883 0.86806 0.77317 1.18234 1.17973 0.85426 0.85126 0.84952 0.90750 0.90558 0.90490 0.90766 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.74 18.54 42.15 0.78 -0.96 16 2 C 0.21 0.02 14.65 -20.76 -0.30 -0.28 16 3 C 0.01 -0.03 2.57 -93.41 -0.24 -0.27 16 4 H 0.12 -0.64 8.14 -51.93 -0.42 -1.06 16 5 C -0.11 0.55 5.16 -26.73 -0.14 0.41 16 6 C -0.11 0.66 5.08 -26.73 -0.14 0.52 16 7 C -0.10 0.57 2.23 -90.62 -0.20 0.37 16 8 H 0.08 -0.46 8.14 -51.93 -0.42 -0.89 16 9 C 0.12 -0.43 5.06 -4.05 -0.02 -0.45 16 10 N -0.73 2.58 5.28 -60.30 -0.32 2.26 16 11 C 0.52 -0.43 7.83 -10.99 -0.09 -0.52 16 12 O -0.54 -1.80 15.98 5.55 0.09 -1.71 16 13 C -0.14 0.36 6.07 -27.89 -0.17 0.19 16 14 C 0.07 -0.02 4.03 37.15 0.15 0.13 16 15 O -0.32 -0.49 10.14 -19.43 -0.20 -0.68 16 16 C 0.13 0.26 6.69 -39.21 -0.26 0.00 16 17 C -0.13 -0.23 9.62 -39.43 -0.38 -0.61 16 18 C -0.08 -0.06 5.35 -104.65 -0.56 -0.62 16 19 C -0.07 -0.01 2.80 36.01 0.10 0.09 16 20 O -0.54 -0.30 12.83 -35.23 -0.45 -0.75 16 21 Si 0.69 -0.61 29.80 -169.99 -5.07 -5.68 16 22 C -0.15 0.01 8.67 -39.56 -0.34 -0.33 16 23 C -0.07 0.00 10.04 -39.61 -0.40 -0.40 16 24 C -0.20 -0.20 9.04 -39.43 -0.36 -0.55 16 25 C -0.11 0.59 5.20 -26.75 -0.14 0.45 16 26 C -0.11 0.52 5.16 -26.76 -0.14 0.38 16 27 H 0.08 -0.34 8.14 -51.93 -0.42 -0.77 16 28 H 0.07 -0.34 8.14 -51.92 -0.42 -0.76 16 29 H 0.07 -0.43 7.18 -51.93 -0.37 -0.81 16 30 H 0.07 -0.40 8.14 -51.93 -0.42 -0.83 16 31 H 0.07 -0.18 8.14 -51.92 -0.42 -0.60 16 32 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 33 H 0.40 -2.44 7.65 -40.82 -0.31 -2.75 16 34 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 35 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 36 H 0.07 0.01 7.62 -51.92 -0.40 -0.38 16 37 H 0.07 0.01 7.62 -51.93 -0.40 -0.39 16 38 H 0.13 0.24 8.06 -52.49 -0.42 -0.19 16 39 H 0.11 0.06 7.96 -51.93 -0.41 -0.36 16 40 H 0.38 -1.26 8.70 45.56 0.40 -0.87 16 41 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 42 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 43 H 0.13 -0.27 4.90 -52.49 -0.26 -0.53 16 44 H 0.13 -0.27 8.06 -52.49 -0.42 -0.69 16 45 H 0.13 0.00 6.30 -52.48 -0.33 -0.33 16 46 H 0.07 -0.41 8.14 -51.93 -0.42 -0.84 16 47 H 0.08 -0.39 8.14 -51.93 -0.42 -0.82 16 48 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 49 H 0.07 -0.32 8.14 -51.93 -0.42 -0.74 16 LS Contribution 401.92 15.07 6.06 6.06 Total: 0.00 -10.39 401.92 -10.35 -20.74 By element: Atomic # 1 Polarization: -10.16 SS G_CDS: -7.62 Total: -17.78 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: -3.62 Total: -1.49 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: 0.46 Total: 1.30 kcal Atomic # 8 Polarization: -2.58 SS G_CDS: -0.56 Total: -3.14 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.07 Total: -5.68 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -10.39 -10.35 -20.74 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16496578_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.787 kcal (2) G-P(sol) polarization free energy of solvation -10.388 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.175 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.347 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.735 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.522 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.79 seconds