Wall clock time and date at job start Sun Mar 7 2021 06:29:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 H 1.09001 * 109.46954 * 342.24906 * 3 2 1 5 5 C 1.52999 * 109.47158 * 102.24311 * 3 2 1 6 6 C 1.52994 * 109.47334 * 179.97438 * 5 3 2 7 7 C 1.53003 * 109.47219 * 300.00507 * 6 5 3 8 8 H 1.09000 * 109.46667 * 299.99455 * 7 6 5 9 9 C 1.52994 * 109.47219 * 179.97438 * 7 6 5 10 10 N 1.46497 * 109.47544 * 64.99683 * 9 7 6 11 11 C 1.34773 * 120.00243 * 180.02562 * 10 9 7 12 12 O 1.21284 * 120.00280 * 359.97438 * 11 10 9 13 13 C 1.50697 * 120.00225 * 180.02562 * 11 10 9 14 14 C 1.52994 * 109.47525 * 179.97438 * 13 11 10 15 15 O 1.42905 * 109.47453 * 179.97438 * 14 13 11 16 16 C 1.35901 * 117.00063 * 180.02562 * 15 14 13 17 17 C 1.38713 * 120.05607 * 179.97438 * 16 15 14 18 18 C 1.38165 * 119.94238 * 179.97438 * 17 16 15 19 19 C 1.50699 * 119.96726 * 180.02562 * 18 17 16 20 20 O 1.42894 * 109.47399 * 64.99941 * 19 18 17 21 21 Si 1.86305 * 109.46829 * 185.00129 * 19 18 17 22 22 C 1.38245 * 120.05717 * 359.97438 * 18 17 16 23 23 C 1.38286 * 120.11203 * 0.02562 * 22 18 17 24 24 C 1.38119 * 120.05454 * 359.97438 * 23 22 18 25 25 C 1.52999 * 109.47381 * 59.99523 * 7 6 5 26 26 C 1.52996 * 109.46824 * 222.24379 * 3 2 1 27 27 H 1.09000 * 109.47572 * 300.00316 * 5 3 2 28 28 H 1.09010 * 109.46777 * 59.99814 * 5 3 2 29 29 H 1.08996 * 109.47258 * 180.02562 * 6 5 3 30 30 H 1.09000 * 109.46856 * 59.99846 * 6 5 3 31 31 H 1.09007 * 109.47128 * 304.99702 * 9 7 6 32 32 H 1.09003 * 109.47267 * 185.00171 * 9 7 6 33 33 H 0.97005 * 119.99769 * 359.97438 * 10 9 7 34 34 H 1.08997 * 109.47527 * 59.99401 * 13 11 10 35 35 H 1.09003 * 109.47084 * 299.99878 * 13 11 10 36 36 H 1.09007 * 109.47128 * 59.99820 * 14 13 11 37 37 H 1.08998 * 109.47282 * 299.99808 * 14 13 11 38 38 H 1.07994 * 120.02419 * 0.25672 * 17 16 15 39 39 H 1.09005 * 109.47415 * 304.99564 * 19 18 17 40 40 H 0.96705 * 113.99954 * 60.00047 * 20 19 18 41 41 H 1.48499 * 109.99900 * 58.68193 * 21 19 18 42 42 H 1.48506 * 109.99755 * 179.97438 * 21 19 18 43 43 H 1.07999 * 119.94068 * 179.97438 * 22 18 17 44 44 H 1.08000 * 119.97222 * 180.02562 * 23 22 18 45 45 H 1.08010 * 120.02819 * 180.02562 * 24 23 22 46 46 H 1.09001 * 109.46702 * 59.99812 * 25 7 6 47 47 H 1.08996 * 109.47162 * 180.02562 * 25 7 6 48 48 H 1.09004 * 109.47283 * 60.00431 * 26 3 2 49 49 H 1.08994 * 109.47448 * 299.99990 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 1 2.9718 -0.9779 0.3133 5 6 3.1179 0.3068 -1.4097 6 6 4.6479 0.3081 -1.4096 7 6 5.1569 1.3765 -0.4399 8 1 4.7928 2.3548 -0.7535 9 6 6.6869 1.3774 -0.4393 10 7 7.1756 1.7867 -1.7583 11 6 8.5007 1.8599 -1.9931 12 8 9.2886 1.5874 -1.1124 13 6 9.0033 2.2816 -3.3498 14 6 10.5333 2.2823 -3.3492 15 8 11.0099 2.6816 -4.6359 16 6 12.3573 2.7345 -4.8056 17 6 12.8890 3.1137 -6.0294 18 6 14.2592 3.1671 -6.1992 19 6 14.8374 3.5796 -7.5283 20 8 14.4938 4.9406 -7.7956 21 14 16.6917 3.4053 -7.4796 22 6 15.1000 2.8437 -5.1506 23 6 14.5723 2.4653 -3.9296 24 6 13.2034 2.4103 -3.7548 25 6 4.6471 1.0704 0.9698 26 6 3.1175 1.0687 0.9698 27 1 2.7549 -0.4541 -2.1006 28 1 2.7541 1.2854 -1.7231 29 1 5.0111 0.5266 -2.4137 30 1 5.0120 -0.6702 -1.0960 31 1 7.0507 0.3753 -0.2119 32 1 7.0496 2.0754 0.3153 33 1 6.5453 2.0044 -2.4629 34 1 8.6399 3.2838 -3.5766 35 1 8.6403 1.5841 -4.1047 36 1 10.8971 1.2801 -3.1223 37 1 10.8960 2.9801 -2.5945 38 1 12.2326 3.3713 -6.8473 39 1 14.4331 2.9416 -8.3142 40 1 14.8219 5.5661 -7.1352 41 1 17.0618 2.0007 -7.1710 42 1 17.2741 3.8084 -8.7849 43 1 16.1707 2.8857 -5.2855 44 1 15.2313 2.2135 -3.1118 45 1 12.7917 2.1151 -2.8008 46 1 5.0112 0.0920 1.2833 47 1 5.0094 1.8318 1.6605 48 1 2.7543 0.8506 1.9741 49 1 2.7538 2.0472 0.6564 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16496578_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:29:59 Heat of formation + Delta-G solvation = -72.095704 kcal Electronic energy + Delta-G solvation = -28311.495815 eV Core-core repulsion = 24204.541459 eV Total energy + Delta-G solvation = -4106.954357 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.177 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -41.39325 -40.88366 -39.94652 -39.09455 -37.52581 -37.24556 -35.75326 -33.49026 -32.47626 -32.36110 -31.69584 -30.78783 -27.64552 -26.88015 -25.07680 -23.68587 -23.66214 -22.90873 -22.00941 -21.40485 -20.70309 -19.33110 -18.68889 -18.10974 -17.66212 -17.49444 -17.12588 -17.03956 -16.71194 -16.45854 -16.15944 -15.89974 -15.37885 -15.28558 -15.09723 -14.93049 -14.79157 -14.60745 -14.41311 -14.26259 -14.19400 -14.17054 -13.89737 -13.41145 -13.21846 -13.12360 -13.03896 -12.89687 -12.80655 -12.66229 -12.35429 -12.03622 -12.00065 -11.95351 -11.78946 -11.62134 -11.54016 -11.27983 -11.04112 -10.92738 -10.47320 -10.06898 -9.93794 -9.26270 -4.97212 0.20564 0.39867 1.31097 1.58040 1.66853 1.74477 1.76502 1.77593 1.98928 2.56041 2.67380 2.92950 3.52403 3.60757 3.68252 3.74795 3.78794 3.81468 3.86611 3.91506 4.01262 4.10984 4.13237 4.24433 4.27984 4.29670 4.38621 4.41569 4.48079 4.51260 4.55634 4.60850 4.63797 4.69654 4.77954 4.78699 4.84889 4.95859 4.98490 5.04599 5.19239 5.20628 5.26713 5.28725 5.30834 5.38798 5.41868 5.44703 5.46646 5.61478 5.71514 6.34161 6.51831 6.57503 6.76959 7.21373 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.506 5.506 2 C 0.235 3.765 3 C 0.009 3.991 4 H 0.136 0.864 5 C -0.108 4.108 6 C -0.110 4.110 7 C -0.093 4.093 8 H 0.089 0.911 9 C 0.123 3.877 10 N -0.714 5.714 11 C 0.519 3.481 12 O -0.586 6.586 13 C -0.134 4.134 14 C 0.074 3.926 15 O -0.325 6.325 16 C 0.117 3.883 17 C -0.143 4.143 18 C -0.085 4.085 19 C -0.078 4.078 20 O -0.555 6.555 21 Si 0.784 3.216 22 C -0.156 4.156 23 C -0.075 4.075 24 C -0.211 4.211 25 C -0.107 4.107 26 C -0.107 4.107 27 H 0.075 0.925 28 H 0.073 0.927 29 H 0.080 0.920 30 H 0.076 0.924 31 H 0.063 0.937 32 H 0.059 0.941 33 H 0.418 0.582 34 H 0.125 0.875 35 H 0.125 0.875 36 H 0.064 0.936 37 H 0.065 0.935 38 H 0.126 0.874 39 H 0.106 0.894 40 H 0.396 0.604 41 H -0.285 1.285 42 H -0.299 1.299 43 H 0.150 0.850 44 H 0.154 0.846 45 H 0.137 0.863 46 H 0.079 0.921 47 H 0.075 0.925 48 H 0.075 0.925 49 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.017 1.231 1.755 3.701 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.183 5.183 2 C -0.081 4.081 3 C -0.012 4.012 4 H 0.154 0.846 5 C -0.147 4.147 6 C -0.148 4.148 7 C -0.112 4.112 8 H 0.108 0.892 9 C -0.001 4.001 10 N -0.366 5.366 11 C 0.306 3.694 12 O -0.466 6.466 13 C -0.174 4.174 14 C -0.002 4.002 15 O -0.239 6.239 16 C 0.072 3.928 17 C -0.161 4.161 18 C -0.086 4.086 19 C -0.187 4.187 20 O -0.363 6.363 21 Si 0.690 3.310 22 C -0.173 4.173 23 C -0.093 4.093 24 C -0.229 4.229 25 C -0.145 4.145 26 C -0.146 4.146 27 H 0.093 0.907 28 H 0.091 0.909 29 H 0.098 0.902 30 H 0.095 0.905 31 H 0.081 0.919 32 H 0.077 0.923 33 H 0.255 0.745 34 H 0.143 0.857 35 H 0.143 0.857 36 H 0.082 0.918 37 H 0.084 0.916 38 H 0.144 0.856 39 H 0.123 0.877 40 H 0.246 0.754 41 H -0.212 1.212 42 H -0.227 1.227 43 H 0.167 0.833 44 H 0.172 0.828 45 H 0.155 0.845 46 H 0.098 0.902 47 H 0.094 0.906 48 H 0.093 0.907 49 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 2.059 0.421 1.410 2.531 hybrid contribution -0.793 -0.340 -0.215 0.889 sum 1.266 0.081 1.196 1.744 Atomic orbital electron populations 1.81309 1.15380 1.10965 1.10615 1.29997 0.95769 0.91139 0.91227 1.19280 0.78436 1.04090 0.99395 0.84615 1.21550 0.96527 1.03263 0.93374 1.21599 0.93523 0.99610 1.00025 1.21409 0.92067 1.00911 0.96800 0.89244 1.21442 0.94404 1.00274 0.83936 1.45887 1.06370 1.68684 1.15687 1.20546 0.82849 0.76533 0.89513 1.90742 1.56509 1.51239 1.48133 1.21444 0.93793 1.06827 0.95318 1.22456 0.94651 1.00540 0.82546 1.85955 1.19210 1.83593 1.35160 1.19144 0.82451 0.96629 0.94617 1.20327 0.95139 1.04788 0.95890 1.20239 0.92926 0.98962 0.96442 1.25294 1.12639 0.85885 0.94897 1.86472 1.81131 1.15358 1.53360 0.93589 0.72811 0.82122 0.82491 1.21169 0.99954 1.03082 0.93103 1.21263 0.94335 0.95840 0.97857 1.21561 0.95027 1.07100 0.99263 1.21462 0.93626 1.03632 0.95807 1.21520 0.96350 0.97977 0.98771 0.90654 0.90867 0.90173 0.90546 0.91874 0.92292 0.74479 0.85708 0.85663 0.91754 0.91627 0.85602 0.87675 0.75431 1.21212 1.22692 0.83278 0.82839 0.84491 0.90187 0.90590 0.90662 0.91040 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.51 -4.71 18.54 20.01 0.37 -4.34 16 2 C 0.24 0.12 14.65 89.44 1.31 1.43 16 3 C 0.01 -0.09 2.57 -12.60 -0.03 -0.12 16 4 H 0.14 -1.73 8.14 -2.39 -0.02 -1.75 16 5 C -0.11 1.20 5.16 30.59 0.16 1.35 16 6 C -0.11 1.44 5.08 30.59 0.16 1.59 16 7 C -0.09 1.13 2.23 -10.79 -0.02 1.11 16 8 H 0.09 -1.15 8.14 -2.39 -0.02 -1.17 16 9 C 0.12 -0.91 5.06 86.38 0.44 -0.48 16 10 N -0.71 5.60 5.28 -463.07 -2.45 3.16 16 11 C 0.52 -0.87 7.83 87.66 0.69 -0.18 16 12 O -0.59 -4.50 15.98 -3.04 -0.05 -4.55 16 13 C -0.13 0.73 6.07 29.85 0.18 0.91 16 14 C 0.07 0.02 4.03 71.98 0.29 0.31 16 15 O -0.33 -1.27 10.14 -92.44 -0.94 -2.21 16 16 C 0.12 0.56 6.69 22.51 0.15 0.71 16 17 C -0.14 -0.68 9.62 22.37 0.22 -0.46 16 18 C -0.09 -0.15 5.35 -19.88 -0.11 -0.25 16 19 C -0.08 -0.04 2.80 71.24 0.20 0.16 16 20 O -0.56 -0.68 12.83 -148.98 -1.91 -2.59 16 21 Si 0.78 -1.67 29.80 68.60 2.04 0.37 16 22 C -0.16 0.14 8.67 22.28 0.19 0.33 16 23 C -0.08 0.04 10.04 22.25 0.22 0.26 16 24 C -0.21 -0.50 9.04 22.37 0.20 -0.30 16 25 C -0.11 1.26 5.20 30.58 0.16 1.42 16 26 C -0.11 1.09 5.16 30.58 0.16 1.25 16 27 H 0.07 -0.77 8.14 -2.39 -0.02 -0.79 16 28 H 0.07 -0.76 8.14 -2.38 -0.02 -0.78 16 29 H 0.08 -1.15 7.18 -2.39 -0.02 -1.17 16 30 H 0.08 -0.98 8.14 -2.39 -0.02 -1.00 16 31 H 0.06 -0.32 8.14 -2.38 -0.02 -0.34 16 32 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 33 H 0.42 -5.74 7.65 -92.70 -0.71 -6.45 16 34 H 0.12 -1.10 8.14 -2.39 -0.02 -1.12 16 35 H 0.13 -1.13 8.14 -2.39 -0.02 -1.15 16 36 H 0.06 0.11 7.62 -2.38 -0.02 0.09 16 37 H 0.07 0.10 7.62 -2.39 -0.02 0.08 16 38 H 0.13 0.66 8.06 -2.91 -0.02 0.64 16 39 H 0.11 0.19 7.96 -2.38 -0.02 0.18 16 40 H 0.40 -2.77 8.70 -74.05 -0.64 -3.42 16 41 H -0.29 -0.72 7.11 99.48 0.71 -0.02 16 42 H -0.30 -1.57 7.11 99.48 0.71 -0.86 16 43 H 0.15 -0.88 4.90 -2.91 -0.01 -0.89 16 44 H 0.15 -0.86 8.06 -2.91 -0.02 -0.88 16 45 H 0.14 0.11 6.30 -2.91 -0.02 0.09 16 46 H 0.08 -0.99 8.14 -2.39 -0.02 -1.01 16 47 H 0.08 -0.83 8.14 -2.39 -0.02 -0.85 16 48 H 0.07 -0.70 8.14 -2.38 -0.02 -0.72 16 49 H 0.07 -0.65 8.14 -2.39 -0.02 -0.67 16 Total: 0.00 -26.61 401.92 1.28 -25.33 By element: Atomic # 1 Polarization: -23.88 SS G_CDS: -0.34 Total: -24.23 kcal Atomic # 6 Polarization: 4.50 SS G_CDS: 4.56 Total: 9.06 kcal Atomic # 7 Polarization: 0.89 SS G_CDS: -2.08 Total: -1.18 kcal Atomic # 8 Polarization: -6.45 SS G_CDS: -2.90 Total: -9.35 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: 2.04 Total: 0.37 kcal Total: -26.61 1.28 -25.33 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16496578_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.763 kcal (2) G-P(sol) polarization free energy of solvation -26.615 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.378 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.282 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.332 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.096 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds