Wall clock time and date at job start Sun Mar 7 2021 06:31:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35901 * 116.99552 * 2 1 4 4 C 1.38615 * 120.02029 * 179.97438 * 3 2 1 5 5 C 1.38655 * 119.88694 * 180.02562 * 4 3 2 6 6 O 1.35896 * 120.02723 * 180.02562 * 5 4 3 7 7 C 1.42898 * 117.00021 * 359.97135 * 6 5 4 8 8 C 1.50702 * 109.47339 * 180.02562 * 7 6 5 9 9 O 1.21282 * 120.00048 * 0.02562 * 8 7 6 10 10 N 1.34778 * 119.99858 * 180.02562 * 8 7 6 11 11 C 1.46503 * 119.99623 * 180.02562 * 10 8 7 12 12 C 1.53003 * 109.47215 * 179.97438 * 11 10 8 13 13 H 1.09003 * 109.46765 * 54.99357 * 12 11 10 14 14 C 1.52996 * 109.47422 * 174.99857 * 12 11 10 15 15 C 1.52995 * 109.47235 * 180.02562 * 14 12 11 16 16 C 1.53009 * 109.47036 * 299.99648 * 15 14 12 17 17 H 1.09001 * 109.47010 * 300.00276 * 16 15 14 18 18 C 1.47196 * 109.47068 * 179.97438 * 16 15 14 19 19 N 9.87345 * 130.58832 * 350.97103 * 7 1 2 20 20 C 1.52996 * 109.46821 * 60.00098 * 16 15 14 21 21 C 1.53003 * 109.47422 * 299.99897 * 20 16 15 22 22 C 1.38747 * 119.94764 * 359.97438 * 5 4 3 23 23 C 1.50699 * 119.97526 * 180.02562 * 22 5 4 24 24 O 1.42903 * 109.47152 * 75.00587 * 23 22 5 25 25 Si 1.86305 * 109.47184 * 195.00059 * 23 22 5 26 26 C 1.38201 * 120.05422 * 0.27592 * 22 5 4 27 27 C 1.38156 * 120.10605 * 359.45384 * 26 22 5 28 28 H 1.08996 * 109.47106 * 300.00029 * 1 2 3 29 29 H 1.09005 * 109.46803 * 59.99955 * 1 2 3 30 30 H 1.08998 * 109.47112 * 180.02562 * 1 2 3 31 31 H 1.07997 * 120.06013 * 0.04202 * 4 3 2 32 32 H 1.09000 * 109.47162 * 300.00332 * 7 6 5 33 33 H 1.09004 * 109.47011 * 60.00575 * 7 6 5 34 34 H 0.96997 * 120.00188 * 359.97438 * 10 8 7 35 35 H 1.09000 * 109.46883 * 299.99550 * 11 10 8 36 36 H 1.08996 * 109.47451 * 59.99587 * 11 10 8 37 37 H 1.09004 * 109.46868 * 299.99995 * 14 12 11 38 38 H 1.09001 * 109.47183 * 59.99613 * 14 12 11 39 39 H 1.09001 * 109.47446 * 59.99657 * 15 14 12 40 40 H 1.09000 * 109.47590 * 179.97438 * 15 14 12 41 41 H 1.09003 * 109.47559 * 59.99911 * 20 16 15 42 42 H 1.09002 * 109.47333 * 180.02562 * 20 16 15 43 43 H 1.09001 * 109.47257 * 300.00342 * 21 20 16 44 44 H 1.08991 * 109.47356 * 179.97438 * 21 20 16 45 45 H 1.08997 * 109.47198 * 315.00265 * 23 22 5 46 46 H 0.96700 * 114.00311 * 180.02562 * 24 23 22 47 47 H 1.48499 * 109.99670 * 178.68093 * 25 23 22 48 48 H 1.48497 * 110.00233 * 300.00062 * 25 23 22 49 49 H 1.07996 * 119.94517 * 179.72131 * 26 22 5 50 50 H 1.07996 * 119.97173 * 180.25302 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4302 1.2841 0.0005 5 6 4.0567 2.5210 0.0011 6 8 5.4136 2.5960 0.0011 7 6 6.1316 1.3606 0.0011 8 6 7.6125 1.6402 0.0018 9 8 8.0135 2.7848 0.0026 10 7 8.4912 0.6182 0.0014 11 6 9.9308 0.8901 0.0026 12 6 10.6996 -0.4327 0.0025 13 1 10.3731 -1.0427 -0.8398 14 6 12.1984 -0.1516 -0.1220 15 6 12.9671 -1.4744 -0.1227 16 6 12.6955 -2.2228 1.1840 17 1 13.0220 -1.6131 2.0265 18 6 13.4346 -3.4957 1.1830 19 7 14.0071 -4.4780 1.1729 20 6 11.1967 -2.5039 1.3085 21 6 10.4279 -1.1811 1.3091 22 6 3.2972 3.6821 0.0005 23 6 3.9774 5.0268 0.0005 24 8 4.5040 5.2943 -1.3007 25 14 2.7437 6.3470 0.4544 26 6 1.9172 3.6065 0.0052 27 6 1.2906 2.3753 -0.0009 28 1 -0.3633 0.5138 0.8899 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 4.0197 0.3792 0.0003 32 1 5.8699 0.7883 0.8911 33 1 5.8700 0.7882 -0.8889 34 1 8.1705 -0.2972 0.0011 35 1 10.1930 1.4632 -0.8868 36 1 10.1919 1.4617 0.8932 37 1 12.3919 0.3812 -1.0530 38 1 12.5248 0.4584 0.7203 39 1 12.6405 -2.0840 -0.9652 40 1 14.0348 -1.2741 -0.2119 41 1 10.8701 -3.1135 0.4659 42 1 11.0031 -3.0367 2.2395 43 1 10.7545 -0.5714 2.1517 44 1 9.3602 -1.3814 1.3974 45 1 4.7896 5.0232 0.7275 46 1 4.9572 6.1453 -1.3744 47 1 3.4094 7.6739 0.4890 48 1 1.6312 6.3623 -0.5292 49 1 1.3278 4.5114 0.0093 50 1 0.2121 2.3187 -0.0014 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16496578_4974312.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:31:24 Heat of formation + Delta-G solvation = -94.715656 kcal Electronic energy + Delta-G solvation = -31575.590725 eV Core-core repulsion = 27148.973302 eV Total energy + Delta-G solvation = -4426.617424 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.177 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -41.79560 -40.95413 -40.13311 -39.63170 -38.25220 -37.47987 -37.07134 -35.76964 -32.81761 -32.36349 -31.71062 -31.38118 -29.65212 -28.35966 -26.88988 -26.05349 -23.87562 -23.62113 -22.84563 -22.35700 -21.61202 -20.74988 -19.86541 -18.69023 -18.54423 -18.47508 -17.79918 -17.46620 -17.31305 -16.86566 -16.69658 -16.63869 -16.30495 -15.71066 -15.60057 -15.54172 -15.27140 -15.20089 -14.89140 -14.80575 -14.60922 -14.25478 -14.11735 -13.99405 -13.76938 -13.63710 -13.39834 -13.32523 -13.18774 -13.12119 -13.04407 -12.68610 -12.47750 -12.39927 -12.00277 -11.97884 -11.93941 -11.73830 -11.59220 -11.54328 -11.26594 -11.02664 -10.91356 -10.38901 -10.13122 -9.68483 -9.08773 -4.93040 0.20653 0.32001 1.32049 1.48360 1.50188 1.60096 1.75096 1.77776 1.92685 2.26453 2.54623 2.63847 2.93627 3.49257 3.59626 3.73495 3.75513 3.79848 3.80539 3.90355 3.99611 4.06666 4.07967 4.13191 4.20856 4.28228 4.32521 4.38588 4.40408 4.43796 4.47747 4.48482 4.55297 4.61508 4.63117 4.76170 4.80318 4.82757 4.96222 5.02083 5.04116 5.19892 5.20288 5.24253 5.28703 5.31105 5.31350 5.37872 5.44596 5.47795 5.61321 6.14497 6.36936 6.48822 6.58292 6.61967 7.16349 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.328 6.328 3 C 0.164 3.836 4 C -0.250 4.250 5 C 0.177 3.823 6 O -0.302 6.302 7 C 0.031 3.969 8 C 0.514 3.486 9 O -0.570 6.570 10 N -0.708 5.708 11 C 0.125 3.875 12 C -0.092 4.092 13 H 0.091 0.909 14 C -0.108 4.108 15 C -0.107 4.107 16 C 0.009 3.991 17 H 0.137 0.863 18 C 0.236 3.764 19 N -0.507 5.507 20 C -0.108 4.108 21 C -0.110 4.110 22 C -0.161 4.161 23 C -0.079 4.079 24 O -0.557 6.557 25 Si 0.777 3.223 26 C -0.042 4.042 27 C -0.239 4.239 28 H 0.071 0.929 29 H 0.065 0.935 30 H 0.117 0.883 31 H 0.158 0.842 32 H 0.126 0.874 33 H 0.116 0.884 34 H 0.419 0.581 35 H 0.057 0.943 36 H 0.064 0.936 37 H 0.074 0.926 38 H 0.080 0.920 39 H 0.071 0.929 40 H 0.074 0.926 41 H 0.073 0.927 42 H 0.076 0.924 43 H 0.077 0.923 44 H 0.082 0.918 45 H 0.069 0.931 46 H 0.388 0.612 47 H -0.290 1.290 48 H -0.282 1.282 49 H 0.150 0.850 50 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.526 -1.393 3.077 6.476 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.241 6.241 3 C 0.118 3.882 4 C -0.269 4.269 5 C 0.131 3.869 6 O -0.214 6.214 7 C -0.046 4.046 8 C 0.300 3.700 9 O -0.449 6.449 10 N -0.362 5.362 11 C 0.002 3.998 12 C -0.111 4.111 13 H 0.109 0.891 14 C -0.146 4.146 15 C -0.146 4.146 16 C -0.012 4.012 17 H 0.154 0.846 18 C -0.081 4.081 19 N -0.183 5.183 20 C -0.147 4.147 21 C -0.148 4.148 22 C -0.162 4.162 23 C -0.187 4.187 24 O -0.366 6.366 25 Si 0.681 3.319 26 C -0.060 4.060 27 C -0.258 4.258 28 H 0.090 0.910 29 H 0.083 0.917 30 H 0.136 0.864 31 H 0.175 0.825 32 H 0.144 0.856 33 H 0.134 0.866 34 H 0.257 0.743 35 H 0.075 0.925 36 H 0.083 0.917 37 H 0.093 0.907 38 H 0.099 0.901 39 H 0.090 0.910 40 H 0.093 0.907 41 H 0.092 0.908 42 H 0.095 0.905 43 H 0.096 0.904 44 H 0.100 0.900 45 H 0.087 0.913 46 H 0.237 0.763 47 H -0.218 1.218 48 H -0.209 1.209 49 H 0.168 0.832 50 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -4.792 -1.975 2.706 5.847 hybrid contribution 0.698 0.181 -1.013 1.243 sum -4.094 -1.794 1.693 4.780 Atomic orbital electron populations 1.23404 0.76058 1.05723 1.02646 1.86053 1.23702 1.26416 1.87944 1.18853 0.91722 0.84886 0.92722 1.20557 0.93333 0.97427 1.15630 1.18544 0.81892 0.93067 0.93424 1.86190 1.15261 1.31854 1.88104 1.22788 0.88808 0.86440 1.06602 1.20367 0.88352 0.85264 0.76060 1.90763 1.80755 1.23277 1.50092 1.45704 1.06453 1.09407 1.74663 1.21464 0.78311 0.98074 1.01985 1.21414 0.95394 0.94485 0.99823 0.89114 1.21467 0.92878 0.96448 1.03770 1.21524 1.01499 0.96393 0.95170 1.19283 0.94326 0.84991 1.02610 0.84560 1.30032 0.92268 0.94667 0.91138 1.81351 1.11871 1.14210 1.10886 1.21551 0.90729 0.98738 1.03651 1.21610 1.00944 0.94991 0.97241 1.18744 0.93108 0.92411 1.11938 1.24951 1.04694 1.01696 0.87324 1.86557 1.76340 1.42843 1.30875 0.94196 0.76624 0.73707 0.87406 1.20890 0.92126 0.98759 0.94230 1.21374 1.01630 0.91195 1.11553 0.91046 0.91684 0.86437 0.82494 0.85616 0.86591 0.74254 0.92474 0.91725 0.90732 0.90130 0.91029 0.90701 0.90820 0.90502 0.90450 0.89987 0.91329 0.76300 1.21783 1.20912 0.83243 0.82522 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.33 10.50 -92.43 -0.97 -1.30 16 3 C 0.16 0.41 6.68 22.49 0.15 0.56 16 4 C -0.25 -0.63 8.97 22.46 0.20 -0.43 16 5 C 0.18 1.11 6.66 22.49 0.15 1.26 16 6 O -0.30 -2.32 8.99 -73.35 -0.66 -2.98 16 7 C 0.03 -0.05 5.22 71.24 0.37 0.32 16 8 C 0.51 1.11 7.91 87.66 0.69 1.80 16 9 O -0.57 -7.77 16.50 16.00 0.26 -7.51 16 10 N -0.71 4.50 5.28 -463.05 -2.45 2.05 16 11 C 0.12 -0.76 5.07 86.38 0.44 -0.32 16 12 C -0.09 1.07 2.22 -10.79 -0.02 1.05 16 13 H 0.09 -1.14 8.14 -2.39 -0.02 -1.16 16 14 C -0.11 1.19 5.20 30.59 0.16 1.35 16 15 C -0.11 1.04 5.16 30.60 0.16 1.20 16 16 C 0.01 -0.08 2.57 -12.60 -0.03 -0.12 16 17 H 0.14 -1.73 8.14 -2.39 -0.02 -1.75 16 18 C 0.24 0.13 14.65 89.43 1.31 1.44 16 19 N -0.51 -4.75 18.54 20.02 0.37 -4.38 16 20 C -0.11 1.20 5.16 30.59 0.16 1.36 16 21 C -0.11 1.44 5.08 30.60 0.16 1.59 16 22 C -0.16 -1.03 5.31 -19.75 -0.10 -1.14 16 23 C -0.08 -0.47 2.37 71.24 0.17 -0.30 16 24 O -0.56 -5.31 12.86 -148.98 -1.92 -7.22 16 25 Si 0.78 0.60 30.18 68.60 2.07 2.67 16 26 C -0.04 -0.11 8.65 22.24 0.19 0.08 16 27 C -0.24 -0.18 9.04 22.38 0.20 0.02 16 28 H 0.07 -0.58 7.66 -2.39 -0.02 -0.60 16 29 H 0.06 -0.46 7.66 -2.38 -0.02 -0.48 16 30 H 0.12 -1.08 8.14 -2.39 -0.02 -1.10 16 31 H 0.16 -0.43 6.30 -2.91 -0.02 -0.45 16 32 H 0.13 -1.03 7.66 -2.39 -0.02 -1.05 16 33 H 0.12 -0.73 7.66 -2.38 -0.02 -0.75 16 34 H 0.42 -5.64 7.65 -92.71 -0.71 -6.35 16 35 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 36 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 37 H 0.07 -0.75 8.14 -2.38 -0.02 -0.77 16 38 H 0.08 -0.94 8.14 -2.39 -0.02 -0.96 16 39 H 0.07 -0.63 8.14 -2.39 -0.02 -0.65 16 40 H 0.07 -0.66 8.14 -2.39 -0.02 -0.68 16 41 H 0.07 -0.78 8.14 -2.39 -0.02 -0.80 16 42 H 0.08 -0.81 8.14 -2.39 -0.02 -0.83 16 43 H 0.08 -0.99 8.14 -2.39 -0.02 -1.01 16 44 H 0.08 -1.20 7.18 -2.39 -0.02 -1.22 16 45 H 0.07 0.44 7.82 -2.39 -0.02 0.42 16 46 H 0.39 0.85 8.74 -74.06 -0.65 0.20 16 47 H -0.29 -1.55 7.11 99.48 0.71 -0.85 16 48 H -0.28 -1.40 6.75 99.48 0.67 -0.72 16 49 H 0.15 -0.14 4.89 -2.91 -0.01 -0.15 16 50 H 0.16 -0.72 6.29 -2.91 -0.02 -0.74 16 Total: 0.00 -32.58 409.65 1.80 -30.78 By element: Atomic # 1 Polarization: -22.49 SS G_CDS: -0.37 Total: -22.86 kcal Atomic # 6 Polarization: 5.30 SS G_CDS: 5.46 Total: 10.75 kcal Atomic # 7 Polarization: -0.26 SS G_CDS: -2.08 Total: -2.33 kcal Atomic # 8 Polarization: -15.72 SS G_CDS: -3.28 Total: -19.00 kcal Atomic # 14 Polarization: 0.60 SS G_CDS: 2.07 Total: 2.67 kcal Total: -32.58 1.80 -30.78 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16496578_4974312.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.935 kcal (2) G-P(sol) polarization free energy of solvation -32.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.517 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.801 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.780 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.716 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds