Wall clock time and date at job start Sun Mar 7 2021 06:31:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13595 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 H 1.09002 * 109.46962 * 173.82452 * 3 2 1 5 5 C 1.53005 * 109.46991 * 293.82044 * 3 2 1 6 6 C 1.52999 * 109.47159 * 179.97438 * 5 3 2 7 7 C 1.52997 * 109.47317 * 300.00546 * 6 5 3 8 8 H 1.09002 * 109.47153 * 299.99641 * 7 6 5 9 9 C 1.53002 * 109.46817 * 179.97438 * 7 6 5 10 10 N 1.46503 * 109.46922 * 175.00209 * 9 7 6 11 11 C 1.34777 * 120.00000 * 180.02562 * 10 9 7 12 12 O 1.21696 * 119.99796 * 359.97438 * 11 10 9 13 13 C 1.46675 * 119.99629 * 179.97438 * 11 10 9 14 14 C 1.37877 * 126.22865 * 180.02562 * 13 11 10 15 15 C 1.39831 * 107.08555 * 180.02562 * 14 13 11 16 16 C 1.35451 * 107.86576 * 0.02562 * 15 14 13 17 17 C 1.50702 * 125.56945 * 179.97438 * 16 15 14 18 18 O 1.42901 * 109.47255 * 245.02549 * 17 16 15 19 19 Si 1.86307 * 109.46732 * 5.01983 * 17 16 15 20 20 N 1.35540 * 108.87181 * 359.72961 * 16 15 14 21 21 C 1.53000 * 109.47060 * 59.99960 * 7 6 5 22 22 C 1.52997 * 109.47240 * 53.82440 * 3 2 1 23 23 H 1.09002 * 109.46935 * 60.00391 * 5 3 2 24 24 H 1.09000 * 109.47360 * 300.00416 * 5 3 2 25 25 H 1.08996 * 109.46929 * 179.97438 * 6 5 3 26 26 H 1.09002 * 109.46716 * 60.00455 * 6 5 3 27 27 H 1.09000 * 109.47059 * 294.99790 * 9 7 6 28 28 H 1.08996 * 109.47073 * 54.99883 * 9 7 6 29 29 H 0.96999 * 119.99670 * 359.97438 * 10 9 7 30 30 H 1.08002 * 126.45813 * 359.96932 * 14 13 11 31 31 H 1.07995 * 126.07132 * 179.97438 * 15 14 13 32 32 H 1.08998 * 109.47592 * 125.01654 * 17 16 15 33 33 H 0.96699 * 114.00360 * 179.97438 * 18 17 16 34 34 H 1.48494 * 110.00015 * 300.00232 * 19 17 16 35 35 H 1.48498 * 109.99959 * 61.32097 * 19 17 16 36 36 H 0.97001 * 125.68001 * 180.30825 * 20 16 15 37 37 H 1.08992 * 109.47399 * 59.99823 * 21 7 6 38 38 H 1.09004 * 109.46724 * 180.02562 * 21 7 6 39 39 H 1.09002 * 109.46695 * 299.99621 * 22 3 2 40 40 H 1.08993 * 109.47194 * 59.99607 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 1 2.9708 1.0225 -0.1106 5 6 3.1182 -0.5817 1.3197 6 6 4.6482 -0.5816 1.3195 7 6 5.1581 -1.4332 0.1551 8 1 4.7949 -2.4549 0.2659 9 6 6.6881 -1.4325 0.1546 10 7 7.1765 -2.3419 -0.8850 11 6 8.5016 -2.5039 -1.0704 12 8 9.2924 -1.8945 -0.3746 13 6 8.9904 -3.4149 -2.1109 14 6 10.3106 -3.6770 -2.4099 15 6 10.3186 -4.5975 -3.4624 16 6 9.0318 -4.8751 -3.7814 17 6 8.5816 -5.8213 -4.8646 18 8 7.8973 -5.0886 -5.8829 19 14 10.0660 -6.6715 -5.6026 20 7 8.2149 -4.1672 -2.9637 21 6 4.6479 -0.8507 -1.1645 22 6 3.1184 -0.8505 -1.1644 23 1 2.7554 -1.6036 1.4302 24 1 2.7546 0.0247 2.1492 25 1 5.0117 -0.9961 2.2598 26 1 5.0114 0.4401 1.2087 27 1 7.0510 -0.4242 -0.0450 28 1 7.0519 -1.7637 1.1273 29 1 6.5461 -2.8280 -1.4393 30 1 11.1757 -3.2508 -1.9235 31 1 11.1951 -5.0128 -3.9374 32 1 7.9098 -6.5670 -4.4396 33 1 7.5790 -5.6353 -6.6143 34 1 10.9899 -5.6656 -6.1854 35 1 10.7684 -7.4627 -4.5605 36 1 7.2452 -4.1862 -2.9782 37 1 5.0111 0.1709 -1.2752 38 1 5.0109 -1.4577 -1.9939 39 1 2.7555 -1.8724 -1.0537 40 1 2.7548 -0.4357 -2.1044 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16496578_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:31:46 Heat of formation + Delta-G solvation = -11.223720 kcal Electronic energy + Delta-G solvation = -22397.380722 eV Core-core repulsion = 18985.623632 eV Total energy + Delta-G solvation = -3411.757090 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 290.142 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.52761 -40.81633 -39.82361 -37.81100 -37.47221 -35.85874 -33.08343 -32.17860 -32.03074 -31.45104 -28.04945 -26.36172 -24.11490 -23.63503 -22.65521 -21.56237 -21.42363 -20.97069 -19.61680 -18.86375 -18.65454 -17.09138 -16.93579 -16.76587 -16.22876 -15.84297 -15.59965 -15.46820 -15.20231 -15.08351 -14.82882 -14.72279 -14.47774 -14.30594 -14.08390 -13.75032 -13.53707 -13.48786 -13.47112 -13.22982 -12.88436 -12.74783 -12.40686 -12.26457 -12.04614 -11.88021 -11.62904 -11.37517 -11.15328 -10.62247 -10.25590 -10.10881 -9.27574 -5.08621 0.33124 1.06909 1.47740 1.64431 1.74084 1.77373 1.92306 1.96901 2.06651 2.37204 2.76895 3.16091 3.37809 3.40896 3.47021 3.68691 3.73306 3.81085 3.93018 4.02813 4.04586 4.08851 4.17105 4.19577 4.20963 4.37123 4.46110 4.51877 4.58474 4.72152 4.78181 4.84442 4.87827 4.90457 4.95547 5.01706 5.03400 5.15525 5.26159 5.57400 5.77317 6.16205 6.35617 6.39834 6.55195 7.09214 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.431 5.431 2 C 0.205 3.795 3 C 0.008 3.992 4 H 0.116 0.884 5 C -0.111 4.111 6 C -0.110 4.110 7 C -0.104 4.104 8 H 0.081 0.919 9 C 0.123 3.877 10 N -0.732 5.732 11 C 0.591 3.409 12 O -0.523 6.523 13 C -0.050 4.050 14 C -0.096 4.096 15 C -0.206 4.206 16 C 0.068 3.932 17 C -0.060 4.060 18 O -0.549 6.549 19 Si 0.716 3.284 20 N -0.522 5.522 21 C -0.115 4.115 22 C -0.112 4.112 23 H 0.073 0.927 24 H 0.077 0.923 25 H 0.076 0.924 26 H 0.075 0.925 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.394 0.606 30 H 0.154 0.846 31 H 0.143 0.857 32 H 0.075 0.925 33 H 0.387 0.613 34 H -0.247 1.247 35 H -0.252 1.252 36 H 0.416 0.584 37 H 0.075 0.925 38 H 0.067 0.933 39 H 0.073 0.927 40 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.295 -4.495 -3.339 5.607 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.107 5.107 2 C -0.113 4.113 3 C -0.014 4.014 4 H 0.134 0.866 5 C -0.150 4.150 6 C -0.148 4.148 7 C -0.122 4.122 8 H 0.100 0.900 9 C 0.000 4.000 10 N -0.384 5.384 11 C 0.378 3.622 12 O -0.398 6.398 13 C -0.164 4.164 14 C -0.122 4.122 15 C -0.230 4.230 16 C -0.049 4.049 17 C -0.169 4.169 18 O -0.356 6.356 19 Si 0.615 3.385 20 N -0.118 5.118 21 C -0.152 4.152 22 C -0.151 4.151 23 H 0.092 0.908 24 H 0.096 0.904 25 H 0.095 0.905 26 H 0.094 0.906 27 H 0.093 0.907 28 H 0.092 0.908 29 H 0.228 0.772 30 H 0.172 0.828 31 H 0.161 0.839 32 H 0.093 0.907 33 H 0.236 0.764 34 H -0.171 1.171 35 H -0.177 1.177 36 H 0.254 0.746 37 H 0.093 0.907 38 H 0.086 0.914 39 H 0.091 0.909 40 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -0.612 -3.581 -2.354 4.329 hybrid contribution -0.752 0.046 0.152 0.769 sum -1.364 -3.535 -2.202 4.382 Atomic orbital electron populations 1.81285 1.13005 1.08375 1.08001 1.29220 0.95124 0.93428 0.93521 1.18967 0.81241 1.03148 0.98031 0.86624 1.21561 0.95930 1.02209 0.95275 1.21490 0.94335 1.00893 0.98094 1.21497 0.93704 1.00968 0.96059 0.90041 1.21475 0.93140 0.94145 0.91207 1.45887 1.06586 1.47381 1.38536 1.16988 0.82161 0.80854 0.82153 1.90882 1.55252 1.47234 1.46448 1.20438 0.91744 1.04056 1.00115 1.21296 0.94901 0.98397 0.97643 1.20592 0.95105 1.04543 1.02782 1.19944 0.90360 0.99253 0.95391 1.24515 1.07557 0.95472 0.89380 1.86483 1.77046 1.37856 1.34236 0.95147 0.76009 0.82131 0.85218 1.41906 1.08825 1.33984 1.27107 1.21616 0.94384 1.02383 0.96854 1.21558 0.95974 1.00365 0.97157 0.90797 0.90435 0.90491 0.90649 0.90741 0.90812 0.77209 0.82825 0.83914 0.90664 0.76449 1.17148 1.17650 0.74610 0.90667 0.91399 0.90855 0.90603 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.81 18.54 42.15 0.78 -1.02 16 2 C 0.21 0.07 14.65 -20.76 -0.30 -0.24 16 3 C 0.01 -0.03 2.57 -93.40 -0.24 -0.27 16 4 H 0.12 -0.60 8.14 -51.93 -0.42 -1.02 16 5 C -0.11 0.48 5.16 -26.73 -0.14 0.34 16 6 C -0.11 0.53 5.20 -26.73 -0.14 0.40 16 7 C -0.10 0.49 2.23 -90.62 -0.20 0.29 16 8 H 0.08 -0.40 8.14 -51.93 -0.42 -0.83 16 9 C 0.12 -0.28 5.06 -4.04 -0.02 -0.30 16 10 N -0.73 1.10 5.28 -61.62 -0.33 0.78 16 11 C 0.59 1.44 7.79 -12.85 -0.10 1.34 16 12 O -0.52 -3.29 16.88 5.19 0.09 -3.20 16 13 C -0.05 -0.11 7.06 -81.98 -0.58 -0.68 16 14 C -0.10 -0.30 10.65 -39.12 -0.42 -0.71 16 15 C -0.21 -0.48 9.32 -39.98 -0.37 -0.86 16 16 C 0.07 0.07 6.50 -81.95 -0.53 -0.46 16 17 C -0.06 0.12 3.07 36.01 0.11 0.23 16 18 O -0.55 1.05 12.86 -35.23 -0.45 0.60 16 19 Si 0.72 -1.85 30.56 -169.99 -5.19 -7.04 16 20 N -0.52 0.06 5.99 -5.69 -0.03 0.03 16 21 C -0.11 0.57 5.07 -26.75 -0.14 0.43 16 22 C -0.11 0.50 5.16 -26.76 -0.14 0.36 16 23 H 0.07 -0.29 8.14 -51.93 -0.42 -0.72 16 24 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 25 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 26 H 0.07 -0.38 8.14 -51.93 -0.42 -0.80 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 29 H 0.39 -1.62 6.78 -40.82 -0.28 -1.90 16 30 H 0.15 0.40 8.06 -52.49 -0.42 -0.02 16 31 H 0.14 0.22 6.19 -52.49 -0.32 -0.11 16 32 H 0.08 -0.30 7.96 -51.93 -0.41 -0.71 16 33 H 0.39 -2.66 8.74 45.56 0.40 -2.26 16 34 H -0.25 -0.23 7.11 56.52 0.40 0.18 16 35 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 36 H 0.42 -1.31 8.19 -40.82 -0.33 -1.64 16 37 H 0.07 -0.35 8.14 -51.93 -0.42 -0.78 16 38 H 0.07 -0.35 7.18 -51.93 -0.37 -0.72 16 39 H 0.07 -0.32 8.14 -51.93 -0.42 -0.74 16 40 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 LS Contribution 336.47 15.07 5.07 5.07 Total: 0.00 -11.08 336.47 -8.87 -19.95 By element: Atomic # 1 Polarization: -9.42 SS G_CDS: -5.59 Total: -15.02 kcal Atomic # 6 Polarization: 3.07 SS G_CDS: -3.21 Total: -0.14 kcal Atomic # 7 Polarization: -0.64 SS G_CDS: 0.42 Total: -0.22 kcal Atomic # 8 Polarization: -2.24 SS G_CDS: -0.37 Total: -2.61 kcal Atomic # 14 Polarization: -1.85 SS G_CDS: -5.19 Total: -7.04 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -11.08 -8.87 -19.95 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16496578_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.723 kcal (2) G-P(sol) polarization free energy of solvation -11.078 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.355 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.869 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.946 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.224 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds