Wall clock time and date at job start Sun Mar 7 2021 06:18:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.52999 * 109.47094 * 2 1 4 4 C 1.53003 * 109.47062 * 240.00437 * 2 1 3 5 5 O 1.45193 * 109.47054 * 120.00176 * 2 1 3 6 6 C 1.34638 * 116.99910 * 60.00077 * 5 2 1 7 7 O 1.21512 * 120.00205 * 0.02562 * 6 5 2 8 8 N 1.34775 * 120.00021 * 179.97438 * 6 5 2 9 9 C 1.46503 * 120.00144 * 180.02562 * 8 6 5 10 10 C 1.53000 * 109.46977 * 179.97438 * 9 8 6 11 11 F 1.39900 * 112.85462 * 316.19490 * 10 9 8 12 12 C 1.53774 * 113.61417 * 87.50610 * 10 9 8 13 13 C 1.53773 * 87.08390 * 139.97787 * 12 10 9 14 14 H 1.09009 * 113.69177 * 89.12679 * 13 12 10 15 15 C 1.53005 * 113.61536 * 220.01567 * 13 12 10 16 16 N 1.46500 * 109.47300 * 272.49539 * 15 13 12 17 17 C 1.34771 * 119.99808 * 179.97438 * 16 15 13 18 18 O 1.21703 * 120.00281 * 0.02562 * 17 16 15 19 19 C 1.46678 * 119.99943 * 180.02562 * 17 16 15 20 20 C 1.37875 * 126.23356 * 180.02562 * 19 17 16 21 21 C 1.39837 * 107.08576 * 179.97438 * 20 19 17 22 22 C 1.50703 * 126.06806 * 179.97438 * 21 20 19 23 23 O 1.42893 * 109.47062 * 300.00225 * 22 21 20 24 24 Si 1.86294 * 109.46949 * 179.97438 * 22 21 20 25 25 C 1.35456 * 107.86293 * 0.02562 * 21 20 19 26 26 N 1.35535 * 108.87368 * 359.97438 * 25 21 20 27 27 C 1.53775 * 87.08475 * 334.56627 * 13 12 10 28 28 H 1.08997 * 109.47236 * 299.99885 * 1 2 3 29 29 H 1.09007 * 109.47039 * 59.99588 * 1 2 3 30 30 H 1.09003 * 109.47071 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47251 * 179.97438 * 3 2 1 32 32 H 1.09002 * 109.47289 * 300.00546 * 3 2 1 33 33 H 1.09003 * 109.46562 * 59.99903 * 3 2 1 34 34 H 1.09002 * 109.46724 * 299.99822 * 4 2 1 35 35 H 1.09002 * 109.46980 * 59.99663 * 4 2 1 36 36 H 1.08998 * 109.46884 * 179.97438 * 4 2 1 37 37 H 0.97004 * 119.99940 * 359.97438 * 8 6 5 38 38 H 1.09006 * 109.46949 * 60.00143 * 9 8 6 39 39 H 1.08995 * 109.47236 * 299.99757 * 9 8 6 40 40 H 1.08999 * 113.61927 * 25.42900 * 12 10 9 41 41 H 1.09007 * 113.61754 * 254.52830 * 12 10 9 42 42 H 1.09001 * 109.47063 * 152.49685 * 15 13 12 43 43 H 1.08999 * 109.46928 * 32.50419 * 15 13 12 44 44 H 0.96999 * 120.00036 * 0.02562 * 16 15 13 45 45 H 1.08004 * 126.45652 * 359.71554 * 20 19 17 46 46 H 1.08996 * 109.46572 * 60.00230 * 22 21 20 47 47 H 0.96699 * 114.00275 * 299.99834 * 23 22 21 48 48 H 1.48503 * 110.00144 * 58.68633 * 24 22 21 49 49 H 1.48496 * 109.99807 * 179.97438 * 24 22 21 50 50 H 1.07996 * 125.55917 * 179.97438 * 25 21 20 51 51 H 0.96993 * 125.67880 * 180.02562 * 26 25 21 52 52 H 1.08999 * 113.61667 * 139.97665 * 27 13 12 53 53 H 1.08999 * 113.61706 * 270.80625 * 27 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3382 7 8 0.9516 -2.5097 0.5034 8 7 2.0680 -2.6658 2.4165 9 6 1.6748 -4.0673 2.5824 10 6 2.2759 -4.6156 3.8781 11 9 3.6118 -4.2414 4.0584 12 6 1.3948 -4.3761 5.1155 13 6 1.7855 -5.7921 5.5705 14 1 2.6919 -5.8234 6.1753 15 6 0.6288 -6.5770 6.1926 16 7 0.5583 -6.2882 7.6271 17 6 -0.3905 -6.8713 8.3860 18 8 -1.1884 -7.6383 7.8798 19 6 -0.4615 -6.5817 9.8222 20 6 -1.3736 -7.1036 10.7147 21 6 -1.0772 -6.5616 11.9692 22 6 -1.8119 -6.8449 13.2542 23 8 -3.1803 -6.4575 13.1157 24 14 -1.0299 -5.8795 14.6423 25 6 -0.0132 -5.7360 11.8242 26 7 0.3706 -5.7395 10.5244 27 6 2.0236 -6.1183 4.0867 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1300 1.4425 0.0005 32 1 1.6766 1.9564 -0.8899 33 1 1.6766 1.9563 0.8900 34 1 1.6767 -1.7488 -1.2493 35 1 1.6766 -0.2073 -2.1393 36 1 3.1300 -0.7208 -1.2495 37 1 2.6282 -2.2371 3.0823 38 1 2.0414 -4.6500 1.7372 39 1 0.5880 -4.1368 2.6277 40 1 0.3353 -4.2690 4.8830 41 1 1.7671 -3.5886 5.7709 42 1 0.7929 -7.6444 6.0445 43 1 -0.3068 -6.2838 5.7164 44 1 1.1940 -5.6766 8.0305 45 1 -2.1698 -7.7969 10.4870 46 1 -1.7566 -7.9104 13.4769 47 1 -3.3054 -5.5196 12.9163 48 1 -1.0698 -4.4269 14.3363 49 1 -1.7457 -6.1497 15.9150 50 1 0.4531 -5.1676 12.6154 51 1 1.1088 -5.2330 10.1511 52 1 2.9036 -6.7372 3.9114 53 1 1.1364 -6.4887 3.5732 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16499940_10543058.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:18:28 Heat of formation + Delta-G solvation = -129.452352 kcal Electronic energy + Delta-G solvation = -34995.716309 eV Core-core repulsion = 29978.089746 eV Total energy + Delta-G solvation = -5017.626563 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.194 amu Computer time = 1.63 seconds Orbital eigenvalues (eV) -48.88451 -42.46096 -41.86134 -40.56798 -39.56098 -38.42530 -37.80170 -36.17425 -35.50877 -34.80365 -32.61866 -31.12612 -30.03429 -28.40179 -28.33582 -27.77606 -27.02808 -26.26883 -24.08003 -23.39590 -22.33073 -21.46178 -21.16819 -20.85028 -20.54273 -19.87370 -19.35081 -17.86587 -17.68615 -17.46553 -17.24867 -17.08489 -16.87570 -16.74934 -16.54123 -16.30393 -16.02982 -15.81616 -15.66473 -15.48105 -15.34799 -15.01185 -14.81021 -14.59793 -14.49754 -14.42792 -14.32260 -13.84947 -13.78364 -13.67984 -13.43794 -13.40864 -13.37494 -13.13342 -12.95445 -12.90546 -12.54090 -12.44922 -12.40717 -12.25504 -12.07819 -11.82190 -11.57187 -11.44399 -11.40665 -11.24056 -11.16382 -10.51129 -10.36499 -10.30034 -9.93616 -9.28075 -4.84140 0.36733 1.05119 1.38402 1.58261 1.66637 1.69122 1.92989 2.10055 2.15575 2.26372 2.93079 3.06757 3.18554 3.19407 3.47504 3.49702 3.55395 3.70501 3.75874 3.83658 3.90859 3.98483 4.04494 4.18604 4.21433 4.31471 4.38267 4.42620 4.54677 4.58118 4.61844 4.64611 4.71338 4.72604 4.73290 4.74373 4.81043 4.82989 4.84430 4.87658 4.91706 4.96842 5.02256 5.03260 5.16105 5.21594 5.23657 5.29513 5.38984 5.51121 5.58819 5.73768 6.24521 6.34765 6.52248 6.63138 7.05360 7.22812 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.181 4.181 5 O -0.369 6.369 6 C 0.645 3.355 7 O -0.591 6.591 8 N -0.701 5.701 9 C 0.128 3.872 10 C 0.082 3.918 11 F -0.194 7.194 12 C -0.144 4.144 13 C -0.109 4.109 14 H 0.116 0.884 15 C 0.131 3.869 16 N -0.713 5.713 17 C 0.587 3.413 18 O -0.577 6.577 19 C -0.070 4.070 20 C -0.106 4.106 21 C -0.226 4.226 22 C -0.061 4.061 23 O -0.558 6.558 24 Si 0.790 3.210 25 C 0.061 3.939 26 N -0.514 5.514 27 C -0.136 4.136 28 H 0.062 0.938 29 H 0.087 0.913 30 H 0.064 0.936 31 H 0.069 0.931 32 H 0.099 0.901 33 H 0.070 0.930 34 H 0.063 0.937 35 H 0.087 0.913 36 H 0.061 0.939 37 H 0.416 0.584 38 H 0.077 0.923 39 H 0.098 0.902 40 H 0.110 0.890 41 H 0.095 0.905 42 H 0.067 0.933 43 H 0.069 0.931 44 H 0.412 0.588 45 H 0.123 0.877 46 H 0.108 0.892 47 H 0.384 0.616 48 H -0.270 1.270 49 H -0.314 1.314 50 H 0.215 0.785 51 H 0.437 0.563 52 H 0.093 0.907 53 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.872 5.537 2.719 10.001 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.238 4.238 5 O -0.284 6.284 6 C 0.399 3.601 7 O -0.482 6.482 8 N -0.362 5.362 9 C 0.005 3.995 10 C 0.064 3.936 11 F -0.174 7.174 12 C -0.181 4.181 13 C -0.128 4.128 14 H 0.134 0.866 15 C 0.008 3.992 16 N -0.364 5.364 17 C 0.375 3.625 18 O -0.457 6.457 19 C -0.183 4.183 20 C -0.133 4.133 21 C -0.232 4.232 22 C -0.170 4.170 23 O -0.366 6.366 24 Si 0.694 3.306 25 C -0.078 4.078 26 N -0.112 5.112 27 C -0.175 4.175 28 H 0.082 0.918 29 H 0.106 0.894 30 H 0.083 0.917 31 H 0.088 0.912 32 H 0.118 0.882 33 H 0.089 0.911 34 H 0.082 0.918 35 H 0.106 0.894 36 H 0.080 0.920 37 H 0.253 0.747 38 H 0.095 0.905 39 H 0.116 0.884 40 H 0.128 0.872 41 H 0.113 0.887 42 H 0.085 0.915 43 H 0.087 0.913 44 H 0.248 0.752 45 H 0.141 0.859 46 H 0.126 0.874 47 H 0.233 0.767 48 H -0.196 1.196 49 H -0.243 1.243 50 H 0.232 0.768 51 H 0.279 0.721 52 H 0.112 0.888 53 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 6.941 4.866 2.441 8.821 hybrid contribution -0.417 0.764 -0.513 1.011 sum 6.523 5.630 1.929 8.830 Atomic orbital electron populations 1.22477 0.93894 1.03744 1.03597 1.22380 0.94563 0.92586 0.81412 1.21897 1.02455 0.90829 1.04315 1.22483 1.01632 1.02268 0.97416 1.86313 1.71511 1.23176 1.47360 1.18269 0.78722 0.80876 0.82270 1.90919 1.42222 1.70997 1.44093 1.44524 1.55491 1.12544 1.23611 1.21923 1.01330 0.79034 0.97171 1.22105 0.78043 0.98109 0.95371 1.92868 1.35750 1.92526 1.96263 1.23807 1.00942 0.98072 0.95291 1.22696 0.98588 0.95116 0.96352 0.86619 1.21392 0.98606 1.00125 0.79083 1.45684 1.33246 1.47869 1.09637 1.17240 0.80713 0.79820 0.84691 1.90862 1.42851 1.38136 1.73849 1.20133 1.00734 1.05546 0.91853 1.21221 0.98773 1.00801 0.92493 1.19890 1.02064 1.05512 0.95719 1.24766 0.84032 1.07060 1.01094 1.86566 1.25258 1.31778 1.92986 0.94328 0.87452 0.76668 0.72128 1.22367 0.97505 1.01283 0.86600 1.41846 1.26579 1.35107 1.07633 1.23587 1.05186 0.93162 0.95562 0.91847 0.89428 0.91728 0.91218 0.88245 0.91110 0.91774 0.89369 0.91993 0.74736 0.90514 0.88402 0.87193 0.88669 0.91489 0.91279 0.75151 0.85944 0.87373 0.76702 1.19573 1.24303 0.76847 0.72104 0.88797 0.86316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.47 8.37 71.98 0.60 0.13 16 2 C 0.13 0.33 1.13 -10.79 -0.01 0.31 16 3 C -0.14 0.34 8.85 71.98 0.64 0.98 16 4 C -0.18 -0.55 8.37 71.98 0.60 0.06 16 5 O -0.37 -1.93 9.94 -55.47 -0.55 -2.48 16 6 C 0.65 3.98 8.06 129.79 1.05 5.02 16 7 O -0.59 -6.59 11.88 19.80 0.24 -6.35 16 8 N -0.70 -0.02 5.45 -590.84 -3.22 -3.24 16 9 C 0.13 -0.41 5.43 86.38 0.47 0.06 16 10 C 0.08 -0.56 1.74 -10.27 -0.02 -0.58 16 11 F -0.19 0.48 16.58 44.97 0.75 1.22 16 12 C -0.14 1.43 7.08 31.12 0.22 1.65 16 13 C -0.11 1.09 3.73 -10.27 -0.04 1.05 16 14 H 0.12 -1.33 8.14 -2.38 -0.02 -1.35 16 15 C 0.13 -0.70 5.51 86.38 0.48 -0.22 16 16 N -0.71 3.55 5.55 -467.07 -2.59 0.96 16 17 C 0.59 2.41 7.79 86.45 0.67 3.08 16 18 O -0.58 -8.22 16.88 -4.36 -0.07 -8.30 16 19 C -0.07 -0.10 7.06 40.35 0.28 0.19 16 20 C -0.11 -0.59 10.59 22.57 0.24 -0.35 16 21 C -0.23 0.07 5.44 -20.12 -0.11 -0.04 16 22 C -0.06 0.00 3.02 71.24 0.22 0.21 16 23 O -0.56 -2.71 12.88 -148.98 -1.92 -4.63 16 24 Si 0.79 -3.79 30.59 68.60 2.10 -1.69 16 25 C 0.06 -0.45 10.45 83.48 0.87 0.42 16 26 N -0.51 4.07 5.99 -183.62 -1.10 2.97 16 27 C -0.14 1.22 7.10 31.12 0.22 1.44 16 28 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 29 H 0.09 -0.07 8.14 -2.38 -0.02 -0.09 16 30 H 0.06 0.50 5.88 -2.39 -0.01 0.49 16 31 H 0.07 -0.18 8.14 -2.39 -0.02 -0.19 16 32 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 33 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 34 H 0.06 0.53 5.88 -2.39 -0.01 0.51 16 35 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 36 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 37 H 0.42 -1.19 8.14 -92.70 -0.75 -1.95 16 38 H 0.08 -0.10 8.14 -2.38 -0.02 -0.12 16 39 H 0.10 -0.39 7.84 -2.39 -0.02 -0.41 16 40 H 0.11 -1.10 7.65 -2.39 -0.02 -1.12 16 41 H 0.09 -1.07 8.14 -2.38 -0.02 -1.08 16 42 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 43 H 0.07 -0.22 7.84 -2.39 -0.02 -0.24 16 44 H 0.41 -5.03 7.60 -92.71 -0.70 -5.73 16 45 H 0.12 1.25 8.06 -2.91 -0.02 1.23 16 46 H 0.11 0.06 7.96 -2.39 -0.02 0.04 16 47 H 0.38 -0.55 8.70 -74.06 -0.64 -1.19 16 48 H -0.27 0.83 7.11 99.48 0.71 1.54 16 49 H -0.31 -1.49 7.11 99.48 0.71 -0.78 16 50 H 0.22 -3.27 6.19 -2.91 -0.02 -3.29 16 51 H 0.44 -6.98 8.19 -92.71 -0.76 -7.74 16 52 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 53 H 0.12 -1.23 8.06 -2.39 -0.02 -1.25 16 Total: 0.00 -30.67 435.36 -1.85 -32.52 By element: Atomic # 1 Polarization: -22.54 SS G_CDS: -1.85 Total: -24.39 kcal Atomic # 6 Polarization: 7.03 SS G_CDS: 6.38 Total: 13.41 kcal Atomic # 7 Polarization: 7.60 SS G_CDS: -6.92 Total: 0.69 kcal Atomic # 8 Polarization: -19.45 SS G_CDS: -2.31 Total: -21.76 kcal Atomic # 9 Polarization: 0.48 SS G_CDS: 0.75 Total: 1.22 kcal Atomic # 14 Polarization: -3.79 SS G_CDS: 2.10 Total: -1.69 kcal Total: -30.67 -1.85 -32.52 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16499940_10543058.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.937 kcal (2) G-P(sol) polarization free energy of solvation -30.669 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.607 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.846 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.515 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.452 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.63 seconds