Wall clock time and date at job start Sun Mar 7 2021 06:29:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.47127 * 2 1 4 4 C 1.52999 * 109.47317 * 119.99511 * 2 1 3 5 5 O 1.45194 * 109.47339 * 239.99574 * 2 1 3 6 6 C 1.34639 * 116.99841 * 60.00459 * 5 2 1 7 7 O 1.21508 * 119.99991 * 359.97438 * 6 5 2 8 8 N 1.34780 * 120.00005 * 179.97438 * 6 5 2 9 9 C 1.46505 * 119.99900 * 179.97438 * 8 6 5 10 10 C 1.52996 * 109.46949 * 180.02562 * 9 8 6 11 11 F 1.39903 * 112.84602 * 314.66460 * 10 9 8 12 12 C 1.53778 * 113.62037 * 85.86363 * 10 9 8 13 13 C 1.54044 * 86.98549 * 89.15936 * 12 10 9 14 14 H 1.09000 * 113.69297 * 270.87653 * 13 12 10 15 15 C 1.53008 * 113.61890 * 139.98385 * 13 12 10 16 16 N 1.46496 * 109.47247 * 87.50506 * 15 13 12 17 17 C 1.34776 * 119.99728 * 180.02562 * 16 15 13 18 18 O 1.21550 * 120.00084 * 359.97438 * 17 16 15 19 19 C 1.47840 * 119.99820 * 179.97438 * 17 16 15 20 20 C 1.39523 * 120.55734 * 359.72107 * 19 17 16 21 21 N 1.31702 * 120.56215 * 179.68322 * 20 19 17 22 22 C 1.31924 * 121.88250 * 0.62846 * 21 20 19 23 23 C 1.38354 * 121.07793 * 359.65601 * 22 21 20 24 24 C 1.50698 * 120.34925 * 180.02562 * 23 22 21 25 25 O 1.42901 * 109.47502 * 244.97946 * 24 23 22 26 26 Si 1.86301 * 109.46977 * 4.98216 * 24 23 22 27 27 C 1.38360 * 119.30408 * 0.02562 * 23 22 21 28 28 C 1.53779 * 113.61306 * 183.47425 * 10 9 8 29 29 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.46832 * 60.00321 * 1 2 3 31 31 H 1.09004 * 109.47261 * 300.00303 * 1 2 3 32 32 H 1.08993 * 109.46955 * 60.00011 * 3 2 1 33 33 H 1.09000 * 109.47050 * 179.97438 * 3 2 1 34 34 H 1.09001 * 109.47002 * 299.99574 * 3 2 1 35 35 H 1.09002 * 109.46716 * 60.00091 * 4 2 1 36 36 H 1.09000 * 109.47486 * 180.02562 * 4 2 1 37 37 H 1.09001 * 109.47362 * 300.00732 * 4 2 1 38 38 H 0.97001 * 119.99769 * 0.02562 * 8 6 5 39 39 H 1.08999 * 109.46873 * 299.99872 * 9 8 6 40 40 H 1.08995 * 109.47310 * 60.00204 * 9 8 6 41 41 H 1.08998 * 113.61852 * 203.66574 * 12 10 9 42 42 H 1.09004 * 113.61058 * 334.56401 * 12 10 9 43 43 H 1.09003 * 109.46790 * 207.50442 * 15 13 12 44 44 H 1.08998 * 109.46835 * 327.50388 * 15 13 12 45 45 H 0.97004 * 119.99996 * 0.02562 * 16 15 13 46 46 H 1.07995 * 119.71924 * 359.97438 * 20 19 17 47 47 H 1.07998 * 119.46217 * 179.67632 * 22 21 20 48 48 H 1.08999 * 109.46999 * 124.97793 * 24 23 22 49 49 H 0.96701 * 113.99584 * 59.99465 * 25 24 23 50 50 H 1.48499 * 109.99778 * 179.97438 * 26 24 23 51 51 H 1.48496 * 109.99909 * 301.31348 * 26 24 23 52 52 H 1.07999 * 120.85989 * 179.97438 * 27 23 22 53 53 H 1.08997 * 113.61833 * 25.42766 * 28 10 9 54 54 H 1.09000 * 113.61699 * 156.33718 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7211 1.2493 5 8 2.0140 -0.6845 -1.1854 6 6 1.6523 -0.1729 -2.3772 7 8 0.9510 0.8182 -2.4252 8 7 2.0682 -0.7601 -3.5168 9 6 1.6742 -0.2038 -4.8136 10 6 2.2744 -1.0524 -5.9362 11 9 3.6202 -1.3668 -5.7192 12 6 1.4121 -2.2668 -6.3190 13 6 0.7013 -1.3422 -7.3255 14 1 -0.1568 -0.8163 -6.9068 15 6 0.3901 -2.0164 -8.6632 16 7 -0.9082 -2.6900 -8.5803 17 6 -1.3912 -3.3560 -9.6478 18 8 -0.7499 -3.3974 -10.6795 19 6 -2.7012 -4.0362 -9.5639 20 6 -3.4444 -4.0010 -8.3837 21 7 -4.6142 -4.6017 -8.3108 22 6 -5.1221 -5.2643 -9.3322 23 6 -4.4446 -5.3508 -10.5354 24 6 -5.0404 -6.1115 -11.6918 25 8 -4.2203 -7.2429 -11.9909 26 14 -6.7531 -6.6882 -11.2392 27 6 -3.2142 -4.7315 -10.6658 28 6 1.9895 -0.5024 -7.3437 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3634 0.5139 0.8900 32 1 1.6767 1.9563 0.8899 33 1 3.1300 1.4425 0.0005 34 1 1.6767 1.9564 -0.8900 35 1 1.6767 -1.7488 1.2493 36 1 3.1300 -0.7207 1.2495 37 1 1.6766 -0.2073 2.1393 38 1 2.6277 -1.5516 -3.4784 39 1 0.5873 -0.2090 -4.8960 40 1 2.0399 0.8197 -4.8961 41 1 1.9762 -3.0722 -6.7890 42 1 0.7665 -2.6153 -5.5128 43 1 0.3592 -1.2636 -9.4510 44 1 1.1653 -2.7483 -8.8902 45 1 -1.4202 -2.6566 -7.7571 46 1 -3.0594 -3.4728 -7.5240 47 1 -6.0827 -5.7468 -9.2277 48 1 -5.0949 -5.4613 -12.5649 49 1 -4.1270 -7.8659 -11.2572 50 1 -7.3519 -7.4393 -12.3717 51 1 -6.6962 -7.5499 -10.0312 52 1 -2.6635 -4.7832 -11.5933 53 1 1.8097 0.5724 -7.3645 54 1 2.7112 -0.8265 -8.0935 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500038_13287814.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:29:58 Heat of formation + Delta-G solvation = -133.533797 kcal Electronic energy + Delta-G solvation = -36720.189492 eV Core-core repulsion = 31574.159803 eV Total energy + Delta-G solvation = -5146.029689 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.194 amu Computer time = 1.92 seconds Orbital eigenvalues (eV) -48.74164 -41.92999 -41.84178 -40.63098 -39.78911 -38.37992 -38.07947 -36.14890 -35.53196 -34.76170 -33.79521 -33.20119 -30.08208 -28.37138 -28.31315 -27.73079 -27.28274 -27.01426 -25.36622 -23.86599 -23.40137 -22.88276 -21.71143 -21.26338 -20.22182 -19.34805 -19.11708 -18.36197 -18.07690 -17.79836 -17.74345 -17.43641 -17.11507 -16.81368 -16.69079 -16.59680 -16.40890 -16.17410 -15.88834 -15.76230 -15.46532 -15.30328 -15.18254 -14.82307 -14.66150 -14.46002 -14.42082 -14.32877 -14.21039 -13.85017 -13.49302 -13.45485 -13.37892 -13.19467 -13.10227 -12.92491 -12.88114 -12.81269 -12.50732 -12.38659 -12.29185 -12.09941 -12.06623 -11.65955 -11.42116 -11.41509 -11.30320 -11.16159 -11.09762 -10.70726 -10.56992 -10.43001 -10.35244 -10.13832 -4.94530 -0.57752 -0.03342 1.06135 1.21901 1.56939 1.65101 1.68976 1.90646 1.98210 2.62397 2.94246 3.07554 3.10502 3.19544 3.25853 3.32668 3.39712 3.43491 3.57743 3.64484 3.71999 3.72992 3.78569 3.78991 3.93454 4.04145 4.10388 4.25928 4.27520 4.36015 4.45260 4.53538 4.56349 4.58530 4.61176 4.68892 4.72498 4.75783 4.76176 4.77117 4.83199 4.84809 4.86907 4.89572 4.94918 4.96965 5.05342 5.17957 5.23015 5.26608 5.32143 5.32336 5.37992 5.52822 6.25531 6.34617 6.40391 6.65090 7.02835 7.24363 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.127 3.873 3 C -0.181 4.181 4 C -0.139 4.139 5 O -0.370 6.370 6 C 0.647 3.353 7 O -0.589 6.589 8 N -0.703 5.703 9 C 0.138 3.862 10 C 0.076 3.924 11 F -0.210 7.210 12 C -0.146 4.146 13 C -0.108 4.108 14 H 0.130 0.870 15 C 0.132 3.868 16 N -0.706 5.706 17 C 0.563 3.437 18 O -0.576 6.576 19 C -0.197 4.197 20 C 0.148 3.852 21 N -0.494 5.494 22 C 0.128 3.872 23 C -0.173 4.173 24 C -0.083 4.083 25 O -0.547 6.547 26 Si 0.774 3.226 27 C -0.002 4.002 28 C -0.135 4.135 29 H 0.063 0.937 30 H 0.066 0.934 31 H 0.086 0.914 32 H 0.087 0.913 33 H 0.059 0.941 34 H 0.065 0.935 35 H 0.070 0.930 36 H 0.067 0.933 37 H 0.099 0.901 38 H 0.415 0.585 39 H 0.108 0.892 40 H 0.080 0.920 41 H 0.097 0.903 42 H 0.097 0.903 43 H 0.071 0.929 44 H 0.065 0.935 45 H 0.417 0.583 46 H 0.193 0.807 47 H 0.182 0.818 48 H 0.129 0.871 49 H 0.388 0.612 50 H -0.299 1.299 51 H -0.271 1.271 52 H 0.136 0.864 53 H 0.102 0.898 54 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.376 0.877 4.372 5.593 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.091 3.909 3 C -0.238 4.238 4 C -0.196 4.196 5 O -0.285 6.285 6 C 0.401 3.599 7 O -0.479 6.479 8 N -0.363 5.363 9 C 0.015 3.985 10 C 0.058 3.942 11 F -0.191 7.191 12 C -0.183 4.183 13 C -0.127 4.127 14 H 0.148 0.852 15 C 0.008 3.992 16 N -0.358 5.358 17 C 0.350 3.650 18 O -0.456 6.456 19 C -0.202 4.202 20 C -0.011 4.011 21 N -0.202 5.202 22 C -0.028 4.028 23 C -0.175 4.175 24 C -0.191 4.191 25 O -0.355 6.355 26 Si 0.678 3.322 27 C -0.029 4.029 28 C -0.174 4.174 29 H 0.082 0.918 30 H 0.085 0.915 31 H 0.105 0.895 32 H 0.106 0.894 33 H 0.078 0.922 34 H 0.084 0.916 35 H 0.089 0.911 36 H 0.086 0.914 37 H 0.118 0.882 38 H 0.251 0.749 39 H 0.126 0.874 40 H 0.098 0.902 41 H 0.116 0.884 42 H 0.116 0.884 43 H 0.089 0.911 44 H 0.083 0.917 45 H 0.255 0.745 46 H 0.210 0.790 47 H 0.198 0.802 48 H 0.146 0.854 49 H 0.237 0.763 50 H -0.226 1.226 51 H -0.197 1.197 52 H 0.154 0.846 53 H 0.120 0.880 54 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -4.149 1.028 4.073 5.904 hybrid contribution 1.867 -1.146 -0.505 2.248 sum -2.282 -0.118 3.568 4.237 Atomic orbital electron populations 1.22470 0.93648 1.03065 1.04435 1.22379 0.94733 0.92398 0.81430 1.22484 1.01546 0.95380 1.04396 1.21900 1.02372 1.01325 0.93986 1.86319 1.71550 1.56644 1.13965 1.18202 0.78711 0.81363 0.81639 1.90916 1.42114 1.27545 1.87369 1.44509 1.55587 1.33322 1.02923 1.21711 1.01684 0.97079 0.78021 1.22704 0.76921 0.98680 0.95925 1.92856 1.36225 1.93890 1.96102 1.23845 0.98197 0.96239 1.00030 1.22685 0.98565 0.97193 0.94218 0.85239 1.21375 0.83956 0.96171 0.97653 1.45745 1.22012 1.52982 1.15110 1.18183 0.84983 0.78371 0.83448 1.90809 1.60821 1.62535 1.31479 1.21013 0.97185 1.04650 0.97363 1.23470 0.88810 0.92788 0.96006 1.67820 1.12682 1.08801 1.30878 1.23254 0.99308 0.92877 0.87374 1.21343 0.96390 1.01876 0.97939 1.25280 1.05118 0.89426 0.99309 1.86620 1.70428 1.35130 1.43365 0.94037 0.75006 0.86125 0.77050 1.21662 0.93531 0.89489 0.98179 1.23592 0.97484 1.02434 0.93885 0.91787 0.91462 0.89485 0.89378 0.92179 0.91613 0.91114 0.91399 0.88245 0.74854 0.87403 0.90194 0.88415 0.88399 0.91087 0.91682 0.74506 0.79026 0.80181 0.85357 0.76303 1.22640 1.19724 0.84571 0.87953 0.87806 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.23 8.37 71.98 0.60 0.37 16 2 C 0.13 0.23 1.13 -10.79 -0.01 0.22 16 3 C -0.18 -0.42 8.37 71.98 0.60 0.18 16 4 C -0.14 0.37 8.85 71.98 0.64 1.01 16 5 O -0.37 -1.70 9.94 -55.48 -0.55 -2.25 16 6 C 0.65 3.21 8.06 129.79 1.05 4.26 16 7 O -0.59 -5.46 11.88 19.82 0.24 -5.22 16 8 N -0.70 0.51 5.46 -590.85 -3.23 -2.71 16 9 C 0.14 -0.63 5.26 86.38 0.45 -0.17 16 10 C 0.08 -0.47 1.88 -10.27 -0.02 -0.48 16 11 F -0.21 -0.07 16.67 44.97 0.75 0.68 16 12 C -0.15 1.34 7.09 31.21 0.22 1.56 16 13 C -0.11 1.17 3.41 -10.17 -0.03 1.13 16 14 H 0.13 -1.88 7.70 -2.39 -0.02 -1.90 16 15 C 0.13 -0.77 5.51 86.38 0.48 -0.30 16 16 N -0.71 3.99 5.51 -465.98 -2.57 1.42 16 17 C 0.56 1.31 7.78 86.79 0.68 1.99 16 18 O -0.58 -6.65 16.42 -3.87 -0.06 -6.72 16 19 C -0.20 -0.03 5.89 -19.99 -0.12 -0.15 16 20 C 0.15 -0.55 10.71 85.02 0.91 0.36 16 21 N -0.49 0.42 10.35 -194.75 -2.01 -1.59 16 22 C 0.13 -0.33 9.84 84.71 0.83 0.50 16 23 C -0.17 0.26 5.35 -19.81 -0.11 0.16 16 24 C -0.08 0.21 2.82 71.24 0.20 0.41 16 25 O -0.55 -0.74 12.84 -148.98 -1.91 -2.65 16 26 Si 0.77 -3.88 29.91 68.60 2.05 -1.82 16 27 C 0.00 0.00 9.38 22.73 0.21 0.21 16 28 C -0.14 1.17 7.13 31.12 0.22 1.40 16 29 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 30 H 0.07 0.40 5.88 -2.39 -0.01 0.38 16 31 H 0.09 -0.16 8.14 -2.38 -0.02 -0.18 16 32 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 33 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 34 H 0.06 0.47 5.88 -2.39 -0.01 0.46 16 35 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 36 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 37 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 38 H 0.42 -1.09 8.19 -92.71 -0.76 -1.85 16 39 H 0.11 -0.79 7.37 -2.39 -0.02 -0.81 16 40 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 41 H 0.10 -0.72 7.90 -2.39 -0.02 -0.74 16 42 H 0.10 -1.08 8.10 -2.38 -0.02 -1.10 16 43 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 44 H 0.06 -0.19 7.85 -2.39 -0.02 -0.21 16 45 H 0.42 -5.09 6.54 -92.71 -0.61 -5.70 16 46 H 0.19 -2.21 6.42 -2.91 -0.02 -2.23 16 47 H 0.18 -1.28 4.85 -2.91 -0.01 -1.29 16 48 H 0.13 -0.48 7.96 -2.39 -0.02 -0.50 16 49 H 0.39 -1.80 8.70 -74.06 -0.64 -2.44 16 50 H -0.30 -0.94 7.11 99.48 0.71 -0.24 16 51 H -0.27 0.63 7.01 99.48 0.70 1.33 16 52 H 0.14 0.65 7.74 -2.91 -0.02 0.63 16 53 H 0.10 -1.06 8.10 -2.39 -0.02 -1.08 16 54 H 0.10 -0.77 8.10 -2.39 -0.02 -0.79 16 Total: 0.00 -26.52 440.47 -1.51 -28.03 By element: Atomic # 1 Polarization: -18.80 SS G_CDS: -1.01 Total: -19.81 kcal Atomic # 6 Polarization: 5.85 SS G_CDS: 6.81 Total: 12.65 kcal Atomic # 7 Polarization: 4.92 SS G_CDS: -7.81 Total: -2.89 kcal Atomic # 8 Polarization: -14.55 SS G_CDS: -2.29 Total: -16.84 kcal Atomic # 9 Polarization: -0.07 SS G_CDS: 0.75 Total: 0.68 kcal Atomic # 14 Polarization: -3.88 SS G_CDS: 2.05 Total: -1.82 kcal Total: -26.52 -1.51 -28.03 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500038_13287814.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.506 kcal (2) G-P(sol) polarization free energy of solvation -26.520 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.026 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.507 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.028 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.534 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.92 seconds