Wall clock time and date at job start Sun Mar 7 2021 06:33:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53005 * 109.47211 * 2 1 4 4 C 1.52998 * 109.47265 * 240.00122 * 2 1 3 5 5 O 1.45203 * 109.47426 * 120.00199 * 2 1 3 6 6 C 1.34634 * 116.99795 * 59.99496 * 5 2 1 7 7 O 1.21505 * 120.00047 * 0.02562 * 6 5 2 8 8 N 1.34774 * 119.99727 * 180.02562 * 6 5 2 9 9 C 1.46506 * 120.00072 * 180.02562 * 8 6 5 10 10 C 1.52997 * 109.47289 * 180.02562 * 9 8 6 11 11 F 1.39894 * 112.85077 * 48.80096 * 10 9 8 12 12 C 1.53776 * 113.61629 * 180.02562 * 10 9 8 13 13 C 1.53774 * 87.08493 * 139.97794 * 12 10 9 14 14 H 1.09005 * 113.61585 * 219.93160 * 13 12 10 15 15 C 1.53004 * 113.61496 * 89.11558 * 13 12 10 16 16 N 1.46492 * 109.47189 * 175.00117 * 15 13 12 17 17 C 1.34775 * 119.99948 * 180.02562 * 16 15 13 18 18 O 1.21635 * 119.99850 * 359.97438 * 17 16 15 19 19 C 1.47192 * 120.00004 * 180.02562 * 17 16 15 20 20 C 1.36008 * 123.46382 * 0.02562 * 19 17 16 21 21 S 1.70447 * 110.81958 * 179.97438 * 20 19 17 22 22 C 1.75497 * 92.44364 * 0.02562 * 21 20 19 23 23 C 1.50703 * 124.71381 * 179.97438 * 22 21 20 24 24 O 1.42901 * 109.47440 * 120.02281 * 23 22 21 25 25 Si 1.86304 * 109.46569 * 0.02562 * 23 22 21 26 26 C 1.32768 * 110.57885 * 359.73673 * 22 21 20 27 27 C 1.53782 * 87.08184 * 334.56644 * 13 12 10 28 28 H 1.09007 * 109.46742 * 300.00157 * 1 2 3 29 29 H 1.08997 * 109.47103 * 59.99591 * 1 2 3 30 30 H 1.08997 * 109.46867 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.46946 * 180.02562 * 3 2 1 32 32 H 1.08992 * 109.46950 * 300.00219 * 3 2 1 33 33 H 1.09004 * 109.46892 * 60.00299 * 3 2 1 34 34 H 1.08998 * 109.46828 * 300.00238 * 4 2 1 35 35 H 1.09004 * 109.47152 * 60.00066 * 4 2 1 36 36 H 1.09001 * 109.47549 * 180.02562 * 4 2 1 37 37 H 0.97001 * 120.00676 * 359.97438 * 8 6 5 38 38 H 1.09001 * 109.47060 * 300.00359 * 9 8 6 39 39 H 1.09004 * 109.47073 * 59.99848 * 9 8 6 40 40 H 1.09000 * 113.61539 * 254.53205 * 12 10 9 41 41 H 1.09005 * 113.61509 * 25.42664 * 12 10 9 42 42 H 1.08998 * 109.46773 * 295.00369 * 15 13 12 43 43 H 1.09005 * 109.46833 * 54.99965 * 15 13 12 44 44 H 0.96999 * 120.00084 * 359.97438 * 16 15 13 45 45 H 1.08003 * 124.58751 * 0.02562 * 20 19 17 46 46 H 1.08999 * 109.47043 * 240.02702 * 23 22 21 47 47 H 0.96705 * 113.99645 * 300.00658 * 24 23 22 48 48 H 1.48496 * 109.99894 * 58.68453 * 25 23 22 49 49 H 1.48504 * 109.99637 * 179.97438 * 25 23 22 50 50 H 1.08004 * 123.46448 * 180.24730 * 26 22 21 51 51 H 1.08996 * 113.61340 * 270.88093 * 27 13 12 52 52 H 1.09001 * 113.61462 * 139.97997 * 27 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0141 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9516 -2.5096 0.5036 8 7 2.0673 -2.6654 2.4171 9 6 1.6741 -4.0669 2.5831 10 6 2.2731 -4.6145 3.8801 11 9 2.0525 -3.7751 4.9772 12 6 1.9186 -6.0865 4.1490 13 6 3.3649 -6.2633 4.6406 14 1 3.8191 -7.2049 4.3318 15 6 3.5440 -5.9785 6.1332 16 7 4.9206 -6.2878 6.5276 17 6 5.3108 -6.1131 7.8057 18 8 4.5201 -5.6982 8.6316 19 6 6.6940 -6.4233 8.2018 20 6 7.6352 -6.8888 7.3374 21 16 9.1206 -7.1375 8.1355 22 6 8.4685 -6.6044 9.6751 23 6 9.2497 -6.5413 10.9623 24 8 9.2659 -5.1961 11.4443 25 14 10.9965 -7.1126 10.6572 26 6 7.1928 -6.2597 9.5473 27 6 3.7338 -5.0741 3.7380 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1300 1.4425 -0.0005 32 1 1.6767 1.9563 -0.8899 33 1 1.6767 1.9563 0.8901 34 1 1.6766 -1.7488 -1.2492 35 1 1.6767 -0.2073 -2.1392 36 1 3.1300 -0.7216 -1.2490 37 1 2.6269 -2.2366 3.0833 38 1 0.5872 -4.1365 2.6275 39 1 2.0412 -4.6498 1.7383 40 1 1.1719 -6.2198 4.9318 41 1 1.6921 -6.6531 3.2458 42 1 3.3374 -4.9265 6.3297 43 1 2.8540 -6.5977 6.7065 44 1 5.5510 -6.6191 5.8690 45 1 7.4647 -7.0748 6.2872 46 1 8.7804 -7.1874 11.7042 47 1 9.6701 -4.5644 10.8338 48 1 11.6368 -6.2592 9.6243 49 1 11.7776 -7.0545 11.9189 50 1 6.5890 -5.8969 10.3661 51 1 4.0036 -5.3639 2.7225 52 1 4.4526 -4.3900 4.1891 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500038_6894386.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:33:54 Heat of formation + Delta-G solvation = -139.379513 kcal Electronic energy + Delta-G solvation = -35054.076128 eV Core-core repulsion = 30062.371108 eV Total energy + Delta-G solvation = -4991.705021 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.155 amu Computer time = 1.68 seconds Orbital eigenvalues (eV) -48.92638 -41.85495 -41.12885 -39.79250 -38.87518 -38.41533 -37.19951 -36.16201 -35.45329 -34.78526 -32.02014 -30.16944 -28.39512 -28.33489 -27.67123 -27.00489 -26.95367 -25.13948 -23.66860 -22.71774 -22.06908 -21.29462 -20.75917 -20.01149 -19.38739 -18.95662 -18.11615 -17.89920 -17.76548 -17.45021 -17.32874 -16.95915 -16.67646 -16.44429 -16.41396 -16.12101 -15.77602 -15.69675 -15.48123 -15.31547 -15.07002 -14.81701 -14.47716 -14.45858 -14.35570 -14.15481 -13.99808 -13.76726 -13.59824 -13.54189 -13.38975 -13.15213 -13.05894 -12.94779 -12.90398 -12.66372 -12.53942 -12.43715 -12.43080 -12.32713 -12.05540 -11.87392 -11.43920 -11.39933 -11.32747 -11.16810 -11.03433 -10.77661 -10.35088 -10.26160 -9.97284 -9.43740 -5.05206 -0.33682 0.39891 0.69945 0.81012 1.06706 1.22553 1.56151 1.67584 1.90928 2.05456 2.25225 2.94365 3.10919 3.21534 3.27060 3.29613 3.42693 3.55367 3.60531 3.70842 3.76348 3.89386 3.91233 3.94928 4.02966 4.28475 4.31804 4.39407 4.48113 4.50118 4.54896 4.58688 4.59054 4.68776 4.71280 4.72419 4.73643 4.74709 4.82311 4.84555 4.88047 4.93710 4.98476 4.99943 5.07155 5.16171 5.16866 5.24208 5.27468 5.30896 5.35373 5.51085 6.24392 6.39552 6.44733 7.13436 7.23091 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.126 3.874 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.371 6.371 6 C 0.646 3.354 7 O -0.590 6.590 8 N -0.703 5.703 9 C 0.131 3.869 10 C 0.069 3.931 11 F -0.201 7.201 12 C -0.133 4.133 13 C -0.113 4.113 14 H 0.125 0.875 15 C 0.129 3.871 16 N -0.706 5.706 17 C 0.572 3.428 18 O -0.588 6.588 19 C -0.184 4.184 20 C -0.188 4.188 21 S 0.255 5.745 22 C -0.247 4.247 23 C -0.048 4.048 24 O -0.545 6.545 25 Si 0.733 3.267 26 C -0.078 4.078 27 C -0.141 4.141 28 H 0.058 0.942 29 H 0.088 0.912 30 H 0.064 0.936 31 H 0.070 0.930 32 H 0.100 0.900 33 H 0.066 0.934 34 H 0.066 0.934 35 H 0.087 0.913 36 H 0.063 0.937 37 H 0.414 0.586 38 H 0.073 0.927 39 H 0.107 0.893 40 H 0.082 0.918 41 H 0.137 0.863 42 H 0.058 0.942 43 H 0.061 0.939 44 H 0.416 0.584 45 H 0.208 0.792 46 H 0.129 0.871 47 H 0.388 0.612 48 H -0.251 1.251 49 H -0.277 1.277 50 H 0.129 0.871 51 H 0.130 0.870 52 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.126 -5.082 -7.131 10.686 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.090 3.910 3 C -0.196 4.196 4 C -0.236 4.236 5 O -0.286 6.286 6 C 0.400 3.600 7 O -0.481 6.481 8 N -0.363 5.363 9 C 0.008 3.992 10 C 0.050 3.950 11 F -0.181 7.181 12 C -0.171 4.171 13 C -0.132 4.132 14 H 0.143 0.857 15 C 0.005 3.995 16 N -0.358 5.358 17 C 0.359 3.641 18 O -0.470 6.470 19 C -0.202 4.202 20 C -0.326 4.326 21 S 0.522 5.478 22 C -0.364 4.364 23 C -0.159 4.159 24 O -0.354 6.354 25 Si 0.633 3.367 26 C -0.107 4.107 27 C -0.178 4.178 28 H 0.078 0.922 29 H 0.107 0.893 30 H 0.083 0.917 31 H 0.089 0.911 32 H 0.118 0.882 33 H 0.085 0.915 34 H 0.084 0.916 35 H 0.106 0.894 36 H 0.082 0.918 37 H 0.250 0.750 38 H 0.091 0.909 39 H 0.126 0.874 40 H 0.101 0.899 41 H 0.155 0.845 42 H 0.077 0.923 43 H 0.080 0.920 44 H 0.254 0.746 45 H 0.224 0.776 46 H 0.147 0.853 47 H 0.238 0.762 48 H -0.176 1.176 49 H -0.202 1.202 50 H 0.147 0.853 51 H 0.149 0.851 52 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 7.161 -5.528 -6.950 11.408 hybrid contribution -1.777 2.126 0.948 2.929 sum 5.384 -3.401 -6.003 8.752 Atomic orbital electron populations 1.22483 0.94108 1.03736 1.03476 1.22386 0.94436 0.92601 0.81568 1.21900 1.02505 0.90951 1.04195 1.22466 1.01714 1.02296 0.97100 1.86320 1.71529 1.23274 1.47462 1.18242 0.78675 0.80821 0.82307 1.90909 1.42004 1.70963 1.44186 1.44575 1.55512 1.12815 1.23394 1.21924 1.00854 0.79362 0.97026 1.22447 0.99871 0.90422 0.82259 1.92852 1.95792 1.73496 1.55985 1.23614 0.97049 0.91983 1.04449 1.22459 0.97825 1.01092 0.91818 0.85679 1.21276 0.82399 1.00956 0.94853 1.45614 1.13723 1.67074 1.09399 1.17960 0.86888 0.76812 0.82435 1.90805 1.55748 1.48001 1.52424 1.20075 0.94469 1.11155 0.94514 1.26200 0.98380 1.02234 1.05785 1.82928 1.08683 1.59894 0.96320 1.24835 0.98695 1.11554 1.01295 1.24768 1.10516 0.87125 0.93477 1.86613 1.83063 1.17685 1.48024 0.94472 0.72183 0.88978 0.81040 1.20971 0.94490 0.99239 0.96028 1.23765 0.93656 0.97387 1.03005 0.92244 0.89289 0.91679 0.91100 0.88166 0.91459 0.91556 0.89397 0.91781 0.75032 0.90852 0.87449 0.89899 0.84524 0.92344 0.92038 0.74555 0.77559 0.85349 0.76231 1.17573 1.20242 0.85313 0.85135 0.90196 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.65 8.37 71.98 0.60 -0.05 16 2 C 0.13 0.39 1.13 -10.79 -0.01 0.38 16 3 C -0.14 0.23 8.85 71.98 0.64 0.87 16 4 C -0.18 -0.43 8.37 71.98 0.60 0.18 16 5 O -0.37 -2.28 9.94 -55.44 -0.55 -2.83 16 6 C 0.65 4.33 8.06 129.79 1.05 5.38 16 7 O -0.59 -6.49 11.88 19.83 0.24 -6.25 16 8 N -0.70 -0.77 5.47 -590.85 -3.23 -4.01 16 9 C 0.13 -0.38 5.36 86.38 0.46 0.09 16 10 C 0.07 -0.33 1.66 -10.27 -0.02 -0.35 16 11 F -0.20 -0.53 15.01 44.97 0.68 0.14 16 12 C -0.13 1.12 7.13 31.12 0.22 1.34 16 13 C -0.11 1.02 3.94 -10.27 -0.04 0.98 16 14 H 0.13 -1.73 8.14 -2.38 -0.02 -1.75 16 15 C 0.13 -0.12 5.28 86.38 0.46 0.33 16 16 N -0.71 1.35 5.52 -466.60 -2.58 -1.23 16 17 C 0.57 3.83 7.79 86.60 0.67 4.51 16 18 O -0.59 -10.17 16.80 -4.14 -0.07 -10.24 16 19 C -0.18 -0.45 5.98 -19.87 -0.12 -0.57 16 20 C -0.19 1.09 10.38 67.30 0.70 1.79 16 21 S 0.26 -1.60 20.18 -56.49 -1.14 -2.73 16 22 C -0.25 0.06 5.69 24.51 0.14 0.20 16 23 C -0.05 0.03 2.95 71.24 0.21 0.24 16 24 O -0.55 -1.78 12.85 -148.98 -1.91 -3.69 16 25 Si 0.73 -2.81 30.91 68.60 2.12 -0.69 16 26 C -0.08 -0.39 9.91 22.67 0.22 -0.16 16 27 C -0.14 1.30 7.07 31.12 0.22 1.52 16 28 H 0.06 0.21 8.14 -2.38 -0.02 0.19 16 29 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 30 H 0.06 0.56 5.88 -2.39 -0.01 0.54 16 31 H 0.07 -0.15 8.14 -2.39 -0.02 -0.16 16 32 H 0.10 -0.52 8.14 -2.39 -0.02 -0.54 16 33 H 0.07 -0.08 8.14 -2.38 -0.02 -0.10 16 34 H 0.07 0.47 5.88 -2.39 -0.01 0.46 16 35 H 0.09 -0.09 8.14 -2.38 -0.02 -0.11 16 36 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 37 H 0.41 -0.29 8.30 -92.71 -0.77 -1.06 16 38 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 39 H 0.11 -0.61 7.95 -2.38 -0.02 -0.63 16 40 H 0.08 -0.48 8.10 -2.39 -0.02 -0.50 16 41 H 0.14 -1.80 8.10 -2.38 -0.02 -1.82 16 42 H 0.06 0.27 6.31 -2.39 -0.02 0.25 16 43 H 0.06 0.13 8.14 -2.38 -0.02 0.11 16 44 H 0.42 -4.11 6.97 -92.71 -0.65 -4.76 16 45 H 0.21 -2.89 7.01 -2.91 -0.02 -2.91 16 46 H 0.13 -0.20 7.96 -2.39 -0.02 -0.22 16 47 H 0.39 -1.15 8.70 -74.05 -0.64 -1.79 16 48 H -0.25 0.47 7.11 99.48 0.71 1.18 16 49 H -0.28 -0.91 7.11 99.48 0.71 -0.20 16 50 H 0.13 1.24 8.06 -2.91 -0.02 1.22 16 51 H 0.13 -1.75 7.96 -2.39 -0.02 -1.77 16 52 H 0.08 -0.57 8.10 -2.39 -0.02 -0.59 16 Total: 0.00 -28.34 437.39 -1.49 -29.83 By element: Atomic # 1 Polarization: -13.93 SS G_CDS: -1.04 Total: -14.97 kcal Atomic # 6 Polarization: 10.66 SS G_CDS: 6.01 Total: 16.67 kcal Atomic # 7 Polarization: 0.58 SS G_CDS: -5.81 Total: -5.23 kcal Atomic # 8 Polarization: -20.71 SS G_CDS: -2.30 Total: -23.01 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.68 Total: 0.14 kcal Atomic # 14 Polarization: -2.81 SS G_CDS: 2.12 Total: -0.69 kcal Atomic # 16 Polarization: -1.60 SS G_CDS: -1.14 Total: -2.73 kcal Total: -28.34 -1.49 -29.83 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500038_6894386.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.553 kcal (2) G-P(sol) polarization free energy of solvation -28.340 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.893 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.487 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.827 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.380 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.68 seconds