Wall clock time and date at job start Sun Mar 7 2021 08:56:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.35531 * 125.68213 * 2 1 4 4 C 1.35458 * 108.87094 * 179.83298 * 3 2 1 5 5 C 1.50702 * 126.06329 * 180.16730 * 4 3 2 6 6 O 1.42897 * 109.47170 * 65.33459 * 5 4 3 7 7 Si 1.86306 * 109.46705 * 185.32982 * 5 4 3 8 8 C 1.39835 * 107.86514 * 0.42942 * 4 3 2 9 9 C 1.37657 * 125.67543 * 180.31259 * 2 1 3 10 10 C 1.46681 * 126.23061 * 359.97438 * 9 2 1 11 11 O 1.21694 * 119.99934 * 5.01675 * 10 9 2 12 12 N 1.34774 * 119.99864 * 185.00857 * 10 9 2 13 13 C 1.46497 * 120.00110 * 185.10132 * 12 10 9 14 14 C 1.53000 * 109.47456 * 180.02562 * 13 12 10 15 15 F 1.39902 * 112.85006 * 314.67109 * 14 13 12 16 16 C 1.53779 * 113.61351 * 85.86327 * 14 13 12 17 17 C 1.53954 * 87.01779 * 139.95802 * 16 14 13 18 18 H 1.09001 * 113.54276 * 89.19300 * 17 16 14 19 19 C 1.53010 * 113.66374 * 220.06790 * 17 16 14 20 20 O 1.42897 * 109.47198 * 272.55846 * 19 17 16 21 21 C 1.53774 * 113.61880 * 183.47370 * 14 13 12 22 22 H 1.09001 * 109.47220 * 264.16215 * 1 2 3 23 23 H 1.08999 * 109.46485 * 24.15579 * 1 2 3 24 24 H 1.09000 * 109.47746 * 144.15871 * 1 2 3 25 25 H 1.07996 * 125.56300 * 359.96012 * 3 2 1 26 26 H 1.08992 * 109.47190 * 305.33183 * 5 4 3 27 27 H 0.96696 * 114.00183 * 179.97438 * 6 5 4 28 28 H 1.48497 * 109.99991 * 300.00173 * 7 5 4 29 29 H 1.48500 * 109.99826 * 61.32360 * 7 5 4 30 30 H 1.08000 * 126.45365 * 179.77536 * 8 4 3 31 31 H 0.96998 * 120.00147 * 5.10405 * 12 10 9 32 32 H 1.08995 * 109.47698 * 300.00273 * 13 12 10 33 33 H 1.09004 * 109.47190 * 60.00510 * 13 12 10 34 34 H 1.09004 * 113.61283 * 254.52942 * 16 14 13 35 35 H 1.08996 * 113.61733 * 25.43379 * 16 14 13 36 36 H 1.09001 * 109.46954 * 32.55678 * 19 17 16 37 37 H 1.09003 * 109.46892 * 152.55517 * 19 17 16 38 38 H 0.96697 * 114.00203 * 179.97438 * 20 19 17 39 39 H 1.09004 * 113.61356 * 334.56592 * 21 14 13 40 40 H 1.09000 * 113.61589 * 105.38755 * 21 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5522 0.7091 0.0037 5 6 4.7538 1.6187 0.0086 6 8 4.7903 2.3531 1.2338 7 14 6.3049 0.5991 -0.1507 8 6 3.5780 -0.6890 -0.0038 9 6 2.2678 -1.1182 -0.0061 10 6 1.8122 -2.5125 -0.0132 11 8 0.6253 -2.7643 -0.1062 12 7 2.7082 -3.5146 0.0832 13 6 2.2664 -4.9063 -0.0360 14 6 3.4710 -5.8382 0.1100 15 9 4.5774 -5.4168 -0.6353 16 6 3.8077 -6.1855 1.5697 17 6 4.0880 -7.6179 1.0799 18 1 5.1195 -7.7765 0.7655 19 6 3.5825 -8.7028 2.0330 20 8 4.5876 -8.9860 3.0085 21 6 3.1273 -7.3244 -0.0844 22 1 -0.3634 -0.1045 1.0223 23 1 -0.3632 0.9377 -0.4206 24 1 -0.3634 -0.8330 -0.6017 25 1 1.9083 2.1235 -0.0006 26 1 4.6875 2.3127 -0.8292 27 1 5.5396 2.9600 1.3065 28 1 6.4070 -0.3512 0.9857 29 1 6.2939 -0.1450 -1.4358 30 1 4.4583 -1.3146 -0.0066 31 1 3.6457 -3.3145 0.2315 32 1 1.5408 -5.1256 0.7472 33 1 1.8049 -5.0587 -1.0117 34 1 4.6915 -5.6718 1.9480 35 1 2.9542 -6.1137 2.2437 36 1 2.6787 -8.3547 2.5332 37 1 3.3593 -9.6078 1.4679 38 1 4.3349 -9.6661 3.6477 39 1 2.0872 -7.5646 0.1365 40 1 3.4611 -7.7284 -1.0402 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_10803934.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:31 Heat of formation + Delta-G solvation = -89.094045 kcal Electronic energy + Delta-G solvation = -24460.413053 eV Core-core repulsion = 20579.021277 eV Total energy + Delta-G solvation = -3881.391776 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.137 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -48.99132 -42.69681 -40.54264 -39.76154 -37.62581 -37.24502 -35.93065 -34.15561 -31.62911 -29.88542 -28.58401 -27.29893 -27.01894 -25.66814 -23.76137 -22.32942 -21.33298 -20.82177 -20.54829 -19.00457 -18.32078 -18.24955 -17.56702 -17.27514 -17.09796 -16.74448 -16.45965 -16.35172 -15.78775 -15.72139 -15.60804 -15.18940 -15.03703 -14.97074 -14.47821 -14.30064 -14.07962 -13.88055 -13.54105 -13.46649 -13.40565 -13.32049 -13.26954 -12.46312 -12.44816 -11.99279 -11.94958 -11.62140 -11.43433 -11.28462 -10.86048 -10.47867 -10.22865 -9.89055 -9.38822 -4.92749 0.18219 1.31349 1.39522 1.45249 1.73104 2.03817 2.07992 2.10164 2.95748 3.02017 3.05982 3.26197 3.41408 3.48117 3.68393 3.74578 3.78746 3.98762 4.09629 4.16740 4.19266 4.27027 4.29487 4.36251 4.45508 4.53276 4.53368 4.55965 4.60161 4.62658 4.65018 4.77308 4.81754 4.90938 4.98750 5.06552 5.30037 5.45689 5.71111 6.03430 6.13974 6.83054 6.85673 7.02777 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.412 5.412 3 C 0.060 3.940 4 C -0.192 4.192 5 C -0.037 4.037 6 O -0.567 6.567 7 Si 0.773 3.227 8 C -0.150 4.150 9 C -0.072 4.072 10 C 0.591 3.409 11 O -0.571 6.571 12 N -0.713 5.713 13 C 0.117 3.883 14 C 0.075 3.925 15 F -0.200 7.200 16 C -0.145 4.145 17 C -0.112 4.112 18 H 0.085 0.915 19 C 0.084 3.916 20 O -0.599 6.599 21 C -0.129 4.129 22 H 0.081 0.919 23 H 0.117 0.883 24 H 0.086 0.914 25 H 0.203 0.797 26 H 0.092 0.908 27 H 0.401 0.599 28 H -0.301 1.301 29 H -0.296 1.296 30 H 0.139 0.861 31 H 0.409 0.591 32 H 0.103 0.897 33 H 0.081 0.919 34 H 0.072 0.928 35 H 0.116 0.884 36 H 0.065 0.935 37 H 0.062 0.938 38 H 0.398 0.602 39 H 0.129 0.871 40 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.160 1.417 0.387 1.478 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.084 5.084 3 C -0.077 4.077 4 C -0.197 4.197 5 C -0.148 4.148 6 O -0.376 6.376 7 Si 0.680 3.320 8 C -0.176 4.176 9 C -0.185 4.185 10 C 0.380 3.620 11 O -0.452 6.452 12 N -0.364 5.364 13 C -0.007 4.007 14 C 0.056 3.944 15 F -0.181 7.181 16 C -0.183 4.183 17 C -0.130 4.130 18 H 0.104 0.896 19 C 0.007 3.993 20 O -0.408 6.408 21 C -0.167 4.167 22 H 0.100 0.900 23 H 0.136 0.864 24 H 0.105 0.895 25 H 0.220 0.780 26 H 0.110 0.890 27 H 0.252 0.748 28 H -0.229 1.229 29 H -0.223 1.223 30 H 0.157 0.843 31 H 0.245 0.755 32 H 0.121 0.879 33 H 0.099 0.901 34 H 0.091 0.909 35 H 0.135 0.865 36 H 0.083 0.917 37 H 0.080 0.920 38 H 0.248 0.752 39 H 0.148 0.852 40 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -0.949 0.502 -0.021 1.074 hybrid contribution -0.158 -0.492 0.172 0.544 sum -1.106 0.011 0.151 1.117 Atomic orbital electron populations 1.22440 0.74283 1.06128 1.04656 1.44138 1.07916 1.04638 1.51697 1.22408 0.89370 0.92554 1.03390 1.19129 0.94531 0.92892 1.13192 1.24019 1.02233 0.98658 0.89899 1.86445 1.53977 1.59969 1.37243 0.94697 0.80878 0.80708 0.75715 1.21248 0.94581 0.95524 1.06272 1.19914 0.90467 0.87991 1.20129 1.17025 0.85251 0.83932 0.75821 1.90780 1.16849 1.85260 1.52342 1.45491 1.11648 1.05840 1.73461 1.21949 0.95789 0.78509 1.04418 1.22243 0.83116 0.95665 0.93350 1.92846 1.55401 1.91436 1.78409 1.23792 1.03778 0.96492 0.94203 1.22508 1.00297 0.94281 0.95956 0.89636 1.22225 0.90220 0.97330 0.89570 1.86444 1.44656 1.63656 1.46029 1.23554 1.02477 0.90838 0.99809 0.90000 0.86435 0.89532 0.77986 0.89000 0.74814 1.22908 1.22341 0.84336 0.75498 0.87940 0.90058 0.90915 0.86536 0.91678 0.92013 0.75238 0.85247 0.89015 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.07 10.49 127.77 1.34 1.41 16 2 N -0.41 -2.49 3.16 -534.31 -1.69 -4.18 16 3 C 0.06 0.23 11.28 83.48 0.94 1.17 16 4 C -0.19 -1.15 5.43 -20.12 -0.11 -1.26 16 5 C -0.04 -0.01 2.99 71.24 0.21 0.20 16 6 O -0.57 -0.03 12.86 -148.98 -1.92 -1.95 16 7 Si 0.77 -0.10 30.65 68.60 2.10 2.00 16 8 C -0.15 -1.24 8.83 22.57 0.20 -1.04 16 9 C -0.07 -0.67 6.89 40.35 0.28 -0.39 16 10 C 0.59 5.78 7.77 86.45 0.67 6.45 16 11 O -0.57 -7.88 14.78 -4.33 -0.06 -7.95 16 12 N -0.71 -3.60 5.43 -467.09 -2.54 -6.13 16 13 C 0.12 0.13 5.41 86.38 0.47 0.60 16 14 C 0.07 0.00 1.71 -10.27 -0.02 -0.02 16 15 F -0.20 -1.13 16.64 44.97 0.75 -0.38 16 16 C -0.15 0.12 7.09 31.18 0.22 0.34 16 17 C -0.11 0.12 3.99 -10.21 -0.04 0.07 16 18 H 0.09 0.25 8.14 -2.39 -0.02 0.23 16 19 C 0.08 -0.26 6.89 71.99 0.50 0.23 16 20 O -0.60 -0.52 13.66 -148.98 -2.03 -2.55 16 21 C -0.13 0.52 7.10 31.12 0.22 0.74 16 22 H 0.08 0.04 8.14 -2.39 -0.02 0.02 16 23 H 0.12 -0.63 8.12 -2.39 -0.02 -0.65 16 24 H 0.09 0.41 6.54 -2.39 -0.02 0.39 16 25 H 0.20 -0.58 8.06 -2.91 -0.02 -0.61 16 26 H 0.09 -0.39 7.96 -2.39 -0.02 -0.41 16 27 H 0.40 -4.20 8.74 -74.06 -0.65 -4.85 16 28 H -0.30 -2.30 7.11 99.48 0.71 -1.59 16 29 H -0.30 -1.83 7.11 99.48 0.71 -1.12 16 30 H 0.14 0.97 5.83 -2.91 -0.02 0.96 16 31 H 0.41 1.54 7.02 -92.71 -0.65 0.89 16 32 H 0.10 -0.08 7.87 -2.39 -0.02 -0.09 16 33 H 0.08 0.14 8.14 -2.39 -0.02 0.12 16 34 H 0.07 0.13 8.14 -2.38 -0.02 0.12 16 35 H 0.12 -0.43 7.68 -2.39 -0.02 -0.45 16 36 H 0.07 -0.41 7.85 -2.39 -0.02 -0.42 16 37 H 0.06 -0.34 8.14 -2.39 -0.02 -0.35 16 38 H 0.40 -3.05 9.12 -74.06 -0.68 -3.73 16 39 H 0.13 -1.11 8.06 -2.38 -0.02 -1.13 16 40 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 Total: 0.00 -24.34 338.96 -1.35 -25.69 By element: Atomic # 1 Polarization: -12.21 SS G_CDS: -0.85 Total: -13.06 kcal Atomic # 6 Polarization: 3.63 SS G_CDS: 4.88 Total: 8.51 kcal Atomic # 7 Polarization: -6.09 SS G_CDS: -4.23 Total: -10.31 kcal Atomic # 8 Polarization: -8.43 SS G_CDS: -4.01 Total: -12.45 kcal Atomic # 9 Polarization: -1.13 SS G_CDS: 0.75 Total: -0.38 kcal Atomic # 14 Polarization: -0.10 SS G_CDS: 2.10 Total: 2.00 kcal Total: -24.34 -1.35 -25.69 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_10803934.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.401 kcal (2) G-P(sol) polarization free energy of solvation -24.341 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.742 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.352 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.693 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.094 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds