Wall clock time and date at job start Sun Mar 7 2021 08:56:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.35451 * 125.56876 * 2 1 4 4 C 1.50703 * 126.06576 * 0.02562 * 3 2 1 5 5 O 1.42899 * 109.47197 * 245.46673 * 4 3 2 6 6 Si 1.86298 * 109.46760 * 125.46433 * 4 3 2 7 7 C 1.39839 * 107.86493 * 180.28397 * 3 2 1 8 8 C 1.50699 * 126.45258 * 179.73650 * 7 3 2 9 9 C 1.37875 * 107.08296 * 359.57024 * 7 3 2 10 10 C 1.46680 * 126.22879 * 180.12303 * 9 7 3 11 11 O 1.21697 * 120.00190 * 0.33249 * 10 9 7 12 12 N 1.34775 * 119.99745 * 180.33196 * 10 9 7 13 13 C 1.46498 * 119.99580 * 180.02562 * 12 10 9 14 14 C 1.53009 * 109.46716 * 180.02562 * 13 12 10 15 15 F 1.39904 * 112.84662 * 316.18960 * 14 13 12 16 16 C 1.53777 * 113.61739 * 87.50256 * 14 13 12 17 17 C 1.53778 * 87.08341 * 139.98062 * 16 14 13 18 18 H 1.08994 * 113.61768 * 89.11476 * 17 16 14 19 19 C 1.52997 * 113.61737 * 220.02096 * 17 16 14 20 20 O 1.42895 * 109.46887 * 272.49675 * 19 17 16 21 21 C 1.53782 * 113.61294 * 185.00303 * 14 13 12 22 22 N 1.35537 * 125.56121 * 180.02562 * 2 1 3 23 23 H 1.09008 * 109.46782 * 84.73941 * 1 2 3 24 24 H 1.08993 * 109.47702 * 204.73757 * 1 2 3 25 25 H 1.09000 * 109.47074 * 324.74596 * 1 2 3 26 26 H 1.09004 * 109.47022 * 5.46373 * 4 3 2 27 27 H 0.96701 * 113.99709 * 299.99716 * 5 4 3 28 28 H 1.48499 * 110.00080 * 58.68129 * 6 4 3 29 29 H 1.48500 * 109.99689 * 180.02562 * 6 4 3 30 30 H 1.09004 * 109.47040 * 89.99681 * 8 7 3 31 31 H 1.09006 * 109.46851 * 209.99369 * 8 7 3 32 32 H 1.08995 * 109.47515 * 329.99386 * 8 7 3 33 33 H 0.97001 * 119.99875 * 359.97438 * 12 10 9 34 34 H 1.09002 * 109.47496 * 299.99497 * 13 12 10 35 35 H 1.08998 * 109.47592 * 60.00451 * 13 12 10 36 36 H 1.09000 * 113.61090 * 254.52984 * 16 14 13 37 37 H 1.09005 * 113.61319 * 25.43018 * 16 14 13 38 38 H 1.09006 * 109.47124 * 32.49209 * 19 17 16 39 39 H 1.09004 * 109.47580 * 152.49308 * 19 17 16 40 40 H 0.96699 * 114.00273 * 179.97438 * 20 19 17 41 41 H 1.09001 * 113.61522 * 334.56225 * 21 14 13 42 42 H 1.08998 * 113.61902 * 105.38147 * 21 14 13 43 43 H 0.97004 * 125.67735 * 0.02562 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2949 1.1018 0.0000 4 6 1.8201 2.5321 0.0005 5 8 2.2005 3.1607 -1.2251 6 14 2.5922 3.4420 1.4311 7 6 3.6271 0.6765 -0.0066 8 6 4.8486 1.5590 -0.0146 9 6 3.6122 -0.7021 -0.0006 10 6 4.7859 -1.5817 -0.0017 11 8 5.9049 -1.1033 -0.0023 12 7 4.6252 -2.9199 -0.0021 13 6 5.7975 -3.7984 -0.0027 14 6 5.3405 -5.2586 -0.0036 15 9 4.2903 -5.4997 0.8887 16 6 5.0979 -5.8273 -1.4116 17 6 5.7495 -7.1279 -0.9131 18 1 5.0425 -7.8277 -0.4676 19 6 6.6701 -7.7861 -1.9428 20 8 5.9039 -8.6533 -2.7812 21 6 6.4961 -6.2659 0.1186 22 7 2.2953 -1.1026 -0.0005 23 1 -0.3633 0.0942 -1.0234 24 1 -0.3634 -0.9333 0.4300 25 1 -0.3633 0.8392 0.5932 26 1 0.7347 2.5545 0.0988 27 1 3.1550 3.1770 -1.3790 28 1 4.0726 3.3913 1.3258 29 1 2.1314 4.8537 1.4432 30 1 5.1487 1.7734 1.0112 31 1 5.6616 1.0495 -0.5320 32 1 4.6193 2.4924 -0.5286 33 1 3.7333 -3.3012 -0.0012 34 1 6.3962 -3.6049 -0.8928 35 1 6.3966 -3.6055 0.8872 36 1 4.0428 -5.9359 -1.6628 37 1 5.6698 -5.3231 -2.1907 38 1 7.1429 -7.0159 -2.5523 39 1 7.4376 -8.3636 -1.4275 40 1 6.4241 -9.1052 -3.4595 41 1 7.4502 -5.8816 -0.2421 42 1 6.5707 -6.7275 1.1032 43 1 1.9833 -2.0211 -0.0013 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_12297754.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:39 Heat of formation + Delta-G solvation = -103.035306 kcal Electronic energy + Delta-G solvation = -26494.591213 eV Core-core repulsion = 22457.057279 eV Total energy + Delta-G solvation = -4037.533934 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.152 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -48.94037 -42.69633 -40.48863 -39.73547 -37.90940 -37.22868 -35.82596 -33.84437 -33.01432 -30.49086 -29.32008 -27.98780 -27.10515 -26.87277 -25.88702 -22.64275 -22.24358 -21.02054 -20.69734 -20.29170 -19.46637 -18.30198 -17.82049 -17.55170 -17.05937 -16.97656 -16.59993 -16.39912 -16.32201 -15.84402 -15.63103 -15.40828 -15.26365 -14.94028 -14.64966 -14.41226 -14.28213 -14.22484 -13.84585 -13.72794 -13.55489 -13.44196 -13.41302 -13.25102 -13.11892 -12.64299 -12.41448 -12.40856 -11.93117 -11.69229 -11.50394 -11.38471 -11.06528 -10.84118 -10.75465 -10.39087 -9.59181 -9.00685 -4.85842 0.31034 1.28133 1.54522 1.71749 1.84387 2.02996 2.10160 2.21614 2.99269 3.06661 3.10562 3.30599 3.48770 3.52670 3.74126 3.79806 3.83569 3.93242 4.11033 4.21323 4.32359 4.35385 4.41951 4.46484 4.52484 4.56357 4.56812 4.59738 4.67918 4.68735 4.80216 4.80689 4.85270 4.93886 4.95731 4.99640 5.12541 5.16087 5.26182 5.34215 5.66762 5.82137 6.25667 6.47115 6.50999 6.86211 6.97349 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C 0.098 3.902 3 C -0.222 4.222 4 C -0.037 4.037 5 O -0.549 6.549 6 Si 0.735 3.265 7 C -0.077 4.077 8 C -0.094 4.094 9 C -0.076 4.076 10 C 0.591 3.409 11 O -0.561 6.561 12 N -0.720 5.720 13 C 0.115 3.885 14 C 0.080 3.920 15 F -0.197 7.197 16 C -0.142 4.142 17 C -0.113 4.113 18 H 0.086 0.914 19 C 0.083 3.917 20 O -0.599 6.599 21 C -0.134 4.134 22 N -0.523 5.523 23 H 0.084 0.916 24 H 0.089 0.911 25 H 0.102 0.898 26 H 0.129 0.871 27 H 0.377 0.623 28 H -0.267 1.267 29 H -0.302 1.302 30 H 0.069 0.931 31 H 0.069 0.931 32 H 0.064 0.936 33 H 0.407 0.593 34 H 0.098 0.902 35 H 0.078 0.922 36 H 0.077 0.923 37 H 0.114 0.886 38 H 0.064 0.936 39 H 0.059 0.941 40 H 0.397 0.603 41 H 0.126 0.874 42 H 0.090 0.910 43 H 0.430 0.570 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.826 -5.085 0.329 5.413 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.021 4.021 3 C -0.228 4.228 4 C -0.148 4.148 5 O -0.358 6.358 6 Si 0.640 3.360 7 C -0.086 4.086 8 C -0.150 4.150 9 C -0.188 4.188 10 C 0.380 3.620 11 O -0.440 6.440 12 N -0.372 5.372 13 C -0.008 4.008 14 C 0.062 3.938 15 F -0.178 7.178 16 C -0.180 4.180 17 C -0.131 4.131 18 H 0.105 0.895 19 C 0.005 3.995 20 O -0.408 6.408 21 C -0.172 4.172 22 N -0.121 5.121 23 H 0.103 0.897 24 H 0.108 0.892 25 H 0.120 0.880 26 H 0.147 0.853 27 H 0.227 0.773 28 H -0.193 1.193 29 H -0.230 1.230 30 H 0.087 0.913 31 H 0.088 0.912 32 H 0.082 0.918 33 H 0.243 0.757 34 H 0.116 0.884 35 H 0.096 0.904 36 H 0.096 0.904 37 H 0.132 0.868 38 H 0.082 0.918 39 H 0.077 0.923 40 H 0.247 0.753 41 H 0.144 0.856 42 H 0.108 0.892 43 H 0.270 0.730 Dipole moment (debyes) X Y Z Total from point charges -1.631 -4.042 0.932 4.457 hybrid contribution 0.611 -0.812 -1.234 1.599 sum -1.021 -4.854 -0.302 4.970 Atomic orbital electron populations 1.20667 0.84846 1.05552 1.04401 1.20757 0.94913 0.84800 1.01680 1.19463 0.91987 0.95731 1.15601 1.24368 1.05485 0.90798 0.94114 1.86569 1.29175 1.80455 1.39570 0.94379 0.79633 0.77455 0.84523 1.19850 0.95057 0.91660 1.02066 1.20536 0.94822 0.97401 1.02283 1.19826 0.83620 0.93618 1.21731 1.17135 0.87372 0.81682 0.75819 1.90819 1.25489 1.75670 1.52047 1.45616 1.10675 1.05148 1.75754 1.21886 0.88285 0.86187 1.04479 1.22153 0.87319 0.94074 0.90297 1.92843 1.59438 1.95426 1.70076 1.23740 1.03295 0.96017 0.94919 1.22479 0.98508 0.95790 0.96344 0.89516 1.22234 0.92704 0.92917 0.91606 1.86436 1.40854 1.63229 1.50239 1.23577 0.97934 0.94667 1.00995 1.41813 1.04326 1.09282 1.56647 0.89700 0.89216 0.87951 0.85348 0.77312 1.19256 1.22958 0.91263 0.91228 0.91766 0.75705 0.88422 0.90409 0.90447 0.86770 0.91787 0.92264 0.75266 0.85622 0.89181 0.72979 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.82 9.98 71.24 0.71 1.53 16 2 C 0.10 -0.19 7.13 41.34 0.29 0.10 16 3 C -0.22 -0.47 4.66 -20.12 -0.09 -0.56 16 4 C -0.04 -0.05 2.85 71.24 0.20 0.16 16 5 O -0.55 -2.99 12.88 -148.98 -1.92 -4.91 16 6 Si 0.74 0.94 30.98 68.60 2.13 3.06 16 7 C -0.08 -0.44 5.82 -19.56 -0.11 -0.55 16 8 C -0.09 -0.62 7.71 71.24 0.55 -0.07 16 9 C -0.08 -0.31 7.06 40.35 0.28 -0.03 16 10 C 0.59 3.56 7.79 86.45 0.67 4.23 16 11 O -0.56 -7.24 14.81 -4.34 -0.06 -7.30 16 12 N -0.72 0.19 5.45 -467.07 -2.54 -2.36 16 13 C 0.12 -0.21 5.43 86.38 0.47 0.26 16 14 C 0.08 -0.27 1.74 -10.27 -0.02 -0.29 16 15 F -0.20 -0.20 16.58 44.97 0.75 0.55 16 16 C -0.14 0.59 7.08 31.12 0.22 0.81 16 17 C -0.11 0.36 3.99 -10.27 -0.04 0.32 16 18 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 19 C 0.08 -0.37 6.88 71.98 0.50 0.12 16 20 O -0.60 0.35 13.66 -148.98 -2.03 -1.69 16 21 C -0.13 0.78 7.10 31.12 0.22 1.00 16 22 N -0.52 1.32 5.99 -171.93 -1.03 0.29 16 23 H 0.08 -0.69 8.14 -2.38 -0.02 -0.71 16 24 H 0.09 -1.05 8.14 -2.39 -0.02 -1.07 16 25 H 0.10 -1.07 7.25 -2.39 -0.02 -1.09 16 26 H 0.13 -0.34 6.65 -2.39 -0.02 -0.35 16 27 H 0.38 0.77 6.58 -74.06 -0.49 0.28 16 28 H -0.27 -1.40 5.05 99.48 0.50 -0.90 16 29 H -0.30 -2.46 7.11 99.48 0.71 -1.75 16 30 H 0.07 0.51 7.16 -2.39 -0.02 0.49 16 31 H 0.07 0.69 6.50 -2.38 -0.02 0.67 16 32 H 0.06 0.24 5.08 -2.39 -0.01 0.22 16 33 H 0.41 -1.77 7.16 -92.71 -0.66 -2.43 16 34 H 0.10 -0.27 7.84 -2.39 -0.02 -0.29 16 35 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 36 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 37 H 0.11 -0.72 7.65 -2.38 -0.02 -0.74 16 38 H 0.06 -0.47 7.84 -2.38 -0.02 -0.49 16 39 H 0.06 -0.37 8.14 -2.39 -0.02 -0.39 16 40 H 0.40 -3.51 9.12 -74.06 -0.68 -4.19 16 41 H 0.13 -1.21 8.06 -2.39 -0.02 -1.23 16 42 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 43 H 0.43 -3.72 8.19 -92.71 -0.76 -4.48 16 Total: 0.00 -21.96 349.78 -2.53 -24.49 By element: Atomic # 1 Polarization: -17.49 SS G_CDS: -1.66 Total: -19.15 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: 3.85 Total: 7.03 kcal Atomic # 7 Polarization: 1.51 SS G_CDS: -3.57 Total: -2.07 kcal Atomic # 8 Polarization: -9.88 SS G_CDS: -4.02 Total: -13.90 kcal Atomic # 9 Polarization: -0.20 SS G_CDS: 0.75 Total: 0.55 kcal Atomic # 14 Polarization: 0.94 SS G_CDS: 2.13 Total: 3.06 kcal Total: -21.96 -2.53 -24.49 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12297754.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.544 kcal (2) G-P(sol) polarization free energy of solvation -21.960 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.505 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.531 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.491 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.035 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds