Wall clock time and date at job start Sun Mar 7 2021 08:56:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86295 * 109.46915 * 2 1 4 4 C 1.50699 * 109.46972 * 119.99751 * 2 1 3 5 5 C 1.38236 * 119.99784 * 244.73145 * 4 2 1 6 6 C 1.38246 * 119.99674 * 179.74632 * 5 4 2 7 7 C 1.38234 * 119.99738 * 0.54527 * 6 5 4 8 8 C 1.50703 * 119.99807 * 179.72629 * 7 6 5 9 9 C 1.50700 * 109.46855 * 269.97890 * 8 7 6 10 10 O 1.21279 * 120.00542 * 359.97438 * 9 8 7 11 11 N 1.34777 * 119.99736 * 179.97438 * 9 8 7 12 12 C 1.46503 * 119.99951 * 179.97438 * 11 9 8 13 13 C 1.53007 * 109.47083 * 180.02562 * 12 11 9 14 14 F 1.39900 * 112.84919 * 316.19823 * 13 12 11 15 15 C 1.53784 * 113.61098 * 87.50516 * 13 12 11 16 16 C 1.53783 * 87.07981 * 139.98145 * 15 13 12 17 17 H 1.08998 * 113.61669 * 89.10905 * 16 15 13 18 18 C 1.53001 * 113.61236 * 220.01870 * 16 15 13 19 19 O 1.42895 * 109.47089 * 272.49427 * 18 16 15 20 20 C 1.53775 * 113.61124 * 185.00014 * 13 12 11 21 21 C 1.38231 * 120.00035 * 359.70782 * 7 6 5 22 22 C 1.38234 * 120.00585 * 0.02562 * 21 7 6 23 23 H 0.96696 * 114.00036 * 60.00219 * 1 2 3 24 24 H 1.09000 * 109.47187 * 239.99852 * 2 1 3 25 25 H 1.48504 * 110.00018 * 298.67819 * 3 2 1 26 26 H 1.48496 * 110.00262 * 59.99721 * 3 2 1 27 27 H 1.07991 * 120.00435 * 359.97438 * 5 4 2 28 28 H 1.07994 * 120.00033 * 180.26807 * 6 5 4 29 29 H 1.09000 * 109.47027 * 29.97482 * 8 7 6 30 30 H 1.08995 * 109.46962 * 149.97985 * 8 7 6 31 31 H 0.97000 * 120.00484 * 0.02562 * 11 9 8 32 32 H 1.09000 * 109.47512 * 300.00138 * 12 11 9 33 33 H 1.08995 * 109.47019 * 60.00565 * 12 11 9 34 34 H 1.08999 * 113.61025 * 254.52639 * 15 13 12 35 35 H 1.08999 * 113.61513 * 25.43283 * 15 13 12 36 36 H 1.08999 * 109.46940 * 32.49729 * 18 16 15 37 37 H 1.09000 * 109.46933 * 152.49607 * 18 16 15 38 38 H 0.96698 * 114.00298 * 179.97438 * 19 18 16 39 39 H 1.08999 * 113.62015 * 334.56808 * 20 13 12 40 40 H 1.09007 * 113.61426 * 105.47660 * 20 13 12 41 41 H 1.08005 * 119.99929 * 179.97438 * 21 7 6 42 42 H 1.07997 * 120.00160 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6435 -0.0134 2.1886 6 6 3.0998 -0.6639 3.3199 7 6 2.8535 -2.0137 3.4876 8 6 3.3562 -2.7242 4.7179 9 6 4.7376 -3.2664 4.4556 10 8 5.2621 -3.0934 3.3758 11 7 5.3902 -3.9436 5.4210 12 6 6.7329 -4.4712 5.1659 13 6 7.2434 -5.1924 6.4150 14 9 6.9858 -4.4850 7.5941 15 6 6.8349 -6.6736 6.4812 16 6 8.2461 -6.9572 7.0224 17 1 8.3192 -6.8897 8.1079 18 6 8.8719 -8.2358 6.4617 19 8 8.4872 -9.3490 7.2708 20 6 8.6968 -5.6800 6.2940 21 6 2.1459 -2.7118 2.5270 22 6 1.6849 -2.0602 1.3983 23 1 -0.3933 0.4417 -0.7650 24 1 1.7924 -0.5139 -0.8900 25 1 1.5879 2.4585 -1.2243 26 1 1.5614 2.4679 1.2084 27 1 2.8403 1.0400 2.0551 28 1 3.6524 -0.1184 4.0705 29 1 3.3932 -2.0238 5.5523 30 1 2.6837 -3.5462 4.9630 31 1 4.9707 -4.0823 6.2845 32 1 6.6956 -5.1721 4.3319 33 1 7.4055 -3.6495 4.9201 34 1 6.0422 -6.8760 7.2015 35 1 6.6443 -7.1180 5.5044 36 1 8.5254 -8.3921 5.4401 37 1 9.9578 -8.1412 6.4666 38 1 8.8483 -10.1952 6.9731 39 1 9.0153 -5.8529 5.2661 40 1 9.4073 -5.0804 6.8632 41 1 1.9539 -3.7665 2.6578 42 1 1.1324 -2.6057 0.6477 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_12335836.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:50 Heat of formation + Delta-G solvation = -114.431016 kcal Electronic energy + Delta-G solvation = -24847.122998 eV Core-core repulsion = 20901.832298 eV Total energy + Delta-G solvation = -3945.290700 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -48.89211 -41.10035 -40.19473 -39.72539 -37.70765 -37.27387 -35.53711 -34.12616 -31.85297 -30.88595 -29.43866 -27.31108 -27.07789 -25.38255 -23.72509 -22.44523 -22.01781 -21.30379 -20.73900 -18.49688 -18.40622 -18.38909 -17.71683 -17.24641 -17.10662 -16.76054 -16.55359 -16.40952 -16.08924 -15.92819 -15.53050 -15.21198 -15.04490 -14.67716 -14.52673 -14.42891 -14.20606 -13.87302 -13.84484 -13.60005 -13.46224 -13.32937 -12.97854 -12.90523 -12.46891 -12.16167 -12.01210 -11.88867 -11.61233 -11.60149 -11.43649 -10.99272 -10.86984 -10.44285 -10.16717 -9.75980 -9.52453 -4.91356 0.32796 0.57166 1.32495 1.62541 1.65557 1.97933 2.03124 2.78071 2.89168 2.99388 3.05954 3.22676 3.39453 3.42390 3.63376 3.65481 3.86488 3.93902 3.99213 4.10997 4.13207 4.19699 4.24952 4.32483 4.39959 4.42014 4.43020 4.47936 4.51848 4.53999 4.56946 4.70613 4.77593 4.79426 4.83923 5.06697 5.16424 5.20598 5.32408 5.47393 5.65232 5.66992 6.08285 6.40446 6.47317 6.57582 7.20084 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.077 4.077 3 Si 0.684 3.316 4 C -0.072 4.072 5 C -0.113 4.113 6 C -0.099 4.099 7 C -0.064 4.064 8 C -0.103 4.103 9 C 0.516 3.484 10 O -0.526 6.526 11 N -0.732 5.732 12 C 0.114 3.886 13 C 0.080 3.920 14 F -0.184 7.184 15 C -0.146 4.146 16 C -0.109 4.109 17 H 0.105 0.895 18 C 0.085 3.915 19 O -0.573 6.573 20 C -0.143 4.143 21 C -0.104 4.104 22 C -0.090 4.090 23 H 0.379 0.621 24 H 0.076 0.924 25 H -0.262 1.262 26 H -0.255 1.255 27 H 0.127 0.873 28 H 0.125 0.875 29 H 0.106 0.894 30 H 0.105 0.895 31 H 0.405 0.595 32 H 0.088 0.912 33 H 0.081 0.919 34 H 0.085 0.915 35 H 0.102 0.898 36 H 0.050 0.950 37 H 0.050 0.950 38 H 0.382 0.618 39 H 0.106 0.894 40 H 0.090 0.910 41 H 0.122 0.878 42 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.769 -2.477 0.005 3.715 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.186 4.186 3 Si 0.585 3.415 4 C -0.072 4.072 5 C -0.131 4.131 6 C -0.117 4.117 7 C -0.064 4.064 8 C -0.142 4.142 9 C 0.302 3.698 10 O -0.401 6.401 11 N -0.385 5.385 12 C -0.010 4.010 13 C 0.062 3.938 14 F -0.164 7.164 15 C -0.183 4.183 16 C -0.127 4.127 17 H 0.123 0.877 18 C 0.008 3.992 19 O -0.379 6.379 20 C -0.181 4.181 21 C -0.122 4.122 22 C -0.108 4.108 23 H 0.227 0.773 24 H 0.094 0.906 25 H -0.187 1.187 26 H -0.180 1.180 27 H 0.144 0.856 28 H 0.143 0.857 29 H 0.124 0.876 30 H 0.124 0.876 31 H 0.240 0.760 32 H 0.106 0.894 33 H 0.099 0.901 34 H 0.103 0.897 35 H 0.120 0.880 36 H 0.068 0.932 37 H 0.069 0.931 38 H 0.229 0.771 39 H 0.124 0.876 40 H 0.108 0.892 41 H 0.140 0.860 42 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 2.717 -1.326 0.121 3.026 hybrid contribution -0.952 -0.639 -0.280 1.180 sum 1.765 -1.965 -0.158 2.646 Atomic orbital electron populations 1.86591 1.17859 1.80178 1.49704 1.24808 0.84382 1.11022 0.98417 0.94922 0.91806 0.74661 0.80113 1.19221 0.98710 0.94186 0.95080 1.20915 0.98884 0.99388 0.93887 1.20887 0.99294 0.93937 0.97609 1.19249 0.98112 0.93759 0.95306 1.20676 0.93917 1.01714 0.97943 1.20581 0.87463 0.77711 0.83997 1.90759 1.68374 1.56937 1.24048 1.45867 1.17704 1.57650 1.17310 1.21784 0.84261 0.99141 0.95847 1.22073 0.98419 0.91555 0.81782 1.92873 1.94896 1.79969 1.48689 1.23723 0.98390 0.92803 1.03412 1.22516 0.95630 0.93006 1.01579 0.87691 1.22142 0.98026 0.85824 0.93254 1.86486 1.76742 1.18340 1.56342 1.23564 0.95027 0.96473 1.03017 1.20986 0.97881 0.99604 0.93712 1.20932 0.98541 0.93809 0.97549 0.77343 0.90640 1.18695 1.17986 0.85601 0.85693 0.87558 0.87634 0.76012 0.89351 0.90102 0.89657 0.87971 0.93209 0.93138 0.77053 0.87606 0.89174 0.85961 0.85796 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.15 12.81 -35.23 -0.45 -1.60 16 2 C -0.08 -0.09 2.79 36.01 0.10 0.01 16 3 Si 0.68 0.14 29.84 -169.99 -5.07 -4.94 16 4 C -0.07 -0.20 5.38 -104.62 -0.56 -0.76 16 5 C -0.11 -0.25 8.67 -39.58 -0.34 -0.59 16 6 C -0.10 -0.18 9.70 -39.58 -0.38 -0.57 16 7 C -0.06 -0.10 4.37 -104.62 -0.46 -0.56 16 8 C -0.10 0.11 5.83 -29.03 -0.17 -0.06 16 9 C 0.52 0.60 7.82 -10.99 -0.09 0.51 16 10 O -0.53 -2.76 16.03 5.56 0.09 -2.67 16 11 N -0.73 0.64 5.45 -60.29 -0.33 0.32 16 12 C 0.11 -0.11 5.43 -4.04 -0.02 -0.14 16 13 C 0.08 -0.12 1.74 -89.81 -0.16 -0.28 16 14 F -0.18 -0.13 16.58 2.25 0.04 -0.09 16 15 C -0.15 0.27 7.08 -25.92 -0.18 0.08 16 16 C -0.11 0.15 3.99 -89.80 -0.36 -0.21 16 17 H 0.10 0.00 8.14 -51.93 -0.42 -0.42 16 18 C 0.09 -0.16 6.88 37.16 0.26 0.10 16 19 O -0.57 0.06 13.66 -35.23 -0.48 -0.42 16 20 C -0.14 0.36 7.10 -25.92 -0.18 0.17 16 21 C -0.10 -0.21 9.70 -39.59 -0.38 -0.60 16 22 C -0.09 -0.25 9.69 -39.58 -0.38 -0.63 16 23 H 0.38 -0.74 8.74 45.56 0.40 -0.34 16 24 H 0.08 -0.02 7.96 -51.93 -0.41 -0.44 16 25 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 26 H -0.26 -0.79 7.05 56.52 0.40 -0.39 16 27 H 0.13 0.06 4.87 -52.49 -0.26 -0.19 16 28 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 29 H 0.11 -0.31 8.09 -51.93 -0.42 -0.73 16 30 H 0.11 -0.32 8.09 -51.93 -0.42 -0.74 16 31 H 0.41 -1.06 8.03 -40.82 -0.33 -1.39 16 32 H 0.09 -0.11 7.84 -51.93 -0.41 -0.52 16 33 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 34 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 35 H 0.10 -0.28 7.65 -51.93 -0.40 -0.68 16 36 H 0.05 -0.15 7.84 -51.93 -0.41 -0.56 16 37 H 0.05 -0.13 8.14 -51.93 -0.42 -0.56 16 38 H 0.38 -1.62 9.12 45.56 0.42 -1.20 16 39 H 0.11 -0.42 8.06 -51.93 -0.42 -0.84 16 40 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 41 H 0.12 0.03 8.06 -52.48 -0.42 -0.39 16 42 H 0.12 0.21 8.06 -52.49 -0.42 -0.21 16 LS Contribution 355.88 15.07 5.36 5.36 Total: 0.00 -9.87 355.88 -9.40 -19.27 By element: Atomic # 1 Polarization: -6.49 SS G_CDS: -5.24 Total: -11.72 kcal Atomic # 6 Polarization: -0.19 SS G_CDS: -3.32 Total: -3.51 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: -0.33 Total: 0.32 kcal Atomic # 8 Polarization: -3.84 SS G_CDS: -0.84 Total: -4.69 kcal Atomic # 9 Polarization: -0.13 SS G_CDS: 0.04 Total: -0.09 kcal Atomic # 14 Polarization: 0.14 SS G_CDS: -5.07 Total: -4.94 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -9.87 -9.40 -19.27 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12335836.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.162 kcal (2) G-P(sol) polarization free energy of solvation -9.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.398 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.269 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.431 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds