Wall clock time and date at job start Sun Mar 7 2021 08:56:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47004 * 2 1 4 4 C 1.50706 * 109.47147 * 119.99485 * 2 1 3 5 5 C 1.34445 * 126.48289 * 254.69280 * 4 2 1 6 6 N 1.36565 * 109.98575 * 179.88984 * 5 4 2 7 7 C 1.37833 * 109.86001 * 0.38340 * 6 5 4 8 8 C 1.38640 * 133.38540 * 179.73369 * 7 6 5 9 9 C 1.39318 * 119.66758 * 180.02562 * 8 7 6 10 10 C 1.47583 * 119.83019 * 180.02562 * 9 8 7 11 11 O 1.21587 * 120.00151 * 0.02562 * 10 9 8 12 12 N 1.34781 * 119.99736 * 180.02562 * 10 9 8 13 13 C 1.46493 * 119.99704 * 179.97438 * 12 10 9 14 14 C 1.53002 * 109.47127 * 179.97438 * 13 12 10 15 15 F 1.39894 * 112.84956 * 314.67047 * 14 13 12 16 16 C 1.53790 * 113.61070 * 85.86387 * 14 13 12 17 17 C 1.53961 * 87.01790 * 139.95449 * 16 14 13 18 18 H 1.08997 * 113.61585 * 89.19722 * 17 16 14 19 19 C 1.53001 * 113.66316 * 220.06659 * 17 16 14 20 20 O 1.42893 * 109.46906 * 272.55760 * 19 17 16 21 21 C 1.53782 * 113.61447 * 183.46824 * 14 13 12 22 22 C 1.40202 * 120.33863 * 0.03802 * 9 8 7 23 23 C 1.36229 * 120.37636 * 359.96190 * 22 9 8 24 24 C 1.39879 * 119.95946 * 0.02562 * 23 22 9 25 25 H 0.96700 * 113.99916 * 60.00213 * 1 2 3 26 26 H 1.09000 * 109.47736 * 240.00116 * 2 1 3 27 27 H 1.48502 * 110.00097 * 59.99768 * 3 2 1 28 28 H 1.48504 * 110.00088 * 181.31854 * 3 2 1 29 29 H 1.07998 * 125.00985 * 0.03390 * 5 4 2 30 30 H 0.96999 * 125.07658 * 180.19138 * 6 5 4 31 31 H 1.08006 * 120.16788 * 0.02562 * 8 7 6 32 32 H 0.96999 * 119.99848 * 0.02562 * 12 10 9 33 33 H 1.09002 * 109.47452 * 300.00373 * 13 12 10 34 34 H 1.09003 * 109.47399 * 60.00163 * 13 12 10 35 35 H 1.09004 * 113.60990 * 254.53060 * 16 14 13 36 36 H 1.08994 * 113.61224 * 25.43103 * 16 14 13 37 37 H 1.08999 * 109.47223 * 32.55928 * 19 17 16 38 38 H 1.08998 * 109.46927 * 152.55801 * 19 17 16 39 39 H 0.96706 * 114.00321 * 180.02562 * 20 19 17 40 40 H 1.08999 * 113.61994 * 334.56996 * 21 14 13 41 41 H 1.09000 * 113.60974 * 105.47567 * 21 14 13 42 42 H 1.08003 * 119.81372 * 179.97438 * 22 9 8 43 43 H 1.07999 * 120.02072 * 180.02562 * 23 22 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.4668 -0.1365 2.3222 6 7 2.8045 -1.0946 3.2349 7 6 2.4954 -2.3431 2.7395 8 6 2.6326 -3.6278 3.2421 9 6 2.2145 -4.7154 2.4784 10 6 2.3583 -6.0846 3.0102 11 8 2.8403 -6.2612 4.1124 12 7 1.9554 -7.1392 2.2739 13 6 2.0987 -8.4983 2.8016 14 6 1.5687 -9.5021 1.7758 15 9 0.3408 -9.1194 1.2255 16 6 2.6118 -9.9181 0.7251 17 6 2.0516 -11.3466 0.8517 18 1 1.2274 -11.5545 0.1694 19 6 3.1290 -12.4328 0.8304 20 8 3.4020 -12.8063 -0.5216 21 6 1.5959 -10.9587 2.2683 22 6 1.6580 -4.5159 1.2071 23 6 1.5195 -3.2568 0.7056 24 6 1.9344 -2.1547 1.4605 25 1 -0.3933 0.4417 -0.7651 26 1 1.7924 -0.5138 -0.8900 27 1 1.5613 2.4679 1.2085 28 1 3.5345 1.7703 -0.0321 29 1 2.6070 0.9256 2.4582 30 1 3.2050 -0.9224 4.1014 31 1 3.0615 -3.7848 4.2209 32 1 1.5713 -6.9983 1.3945 33 1 3.1510 -8.7021 2.9998 34 1 1.5303 -8.5906 3.7270 35 1 2.4478 -9.4690 -0.2545 36 1 3.6413 -9.8206 1.0695 37 1 4.0392 -12.0508 1.2927 38 1 2.7780 -13.3035 1.3841 39 1 4.0770 -13.4930 -0.6113 40 1 2.3471 -11.1464 3.0354 41 1 0.6129 -11.3485 2.5327 42 1 1.3371 -5.3651 0.6221 43 1 1.0897 -3.1097 -0.2742 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_12335838.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:52 Heat of formation + Delta-G solvation = -78.235893 kcal Electronic energy + Delta-G solvation = -27965.869362 eV Core-core repulsion = 23700.270009 eV Total energy + Delta-G solvation = -4265.599353 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.137 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -48.89379 -42.58377 -40.97849 -39.80232 -37.91657 -37.49919 -37.19545 -35.75421 -33.45630 -31.42391 -30.86755 -29.82741 -27.32516 -26.98805 -26.41840 -24.54419 -23.75529 -22.24260 -21.62715 -20.73140 -20.62829 -19.39893 -18.59788 -18.27895 -18.25024 -17.69550 -17.23475 -17.00084 -16.69087 -16.43952 -16.12975 -15.89522 -15.71146 -15.48360 -15.27519 -15.08762 -14.98049 -14.81002 -14.78070 -14.57270 -14.28728 -13.85638 -13.79812 -13.42184 -13.28701 -13.20272 -12.75337 -12.59313 -12.37947 -12.17425 -11.93991 -11.89228 -11.55815 -11.34909 -11.17074 -10.90037 -10.81418 -10.33500 -10.15549 -9.49596 -8.93162 -4.91237 -0.44652 0.27323 1.20781 1.37388 1.69993 1.74489 1.81099 2.00941 2.08242 2.76693 3.02906 3.10292 3.13978 3.33511 3.46351 3.51466 3.56841 3.64819 3.70688 3.81483 4.00320 4.04712 4.18735 4.23567 4.28178 4.35218 4.38737 4.44127 4.47574 4.55336 4.59849 4.62922 4.70860 4.72054 4.83892 4.89105 4.90299 4.97463 5.10846 5.17032 5.31019 5.36920 5.38368 5.48987 5.85556 6.29584 6.35238 6.88774 6.98845 7.02573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.568 6.568 2 C -0.046 4.046 3 Si 0.782 3.218 4 C -0.188 4.188 5 C 0.068 3.932 6 N -0.578 5.578 7 C 0.067 3.933 8 C -0.065 4.065 9 C -0.132 4.132 10 C 0.565 3.435 11 O -0.577 6.577 12 N -0.713 5.713 13 C 0.113 3.887 14 C 0.079 3.921 15 F -0.198 7.198 16 C -0.142 4.142 17 C -0.113 4.113 18 H 0.086 0.914 19 C 0.083 3.917 20 O -0.599 6.599 21 C -0.133 4.133 22 C -0.108 4.108 23 C -0.076 4.076 24 C -0.083 4.083 25 H 0.400 0.600 26 H 0.084 0.916 27 H -0.289 1.289 28 H -0.291 1.291 29 H 0.187 0.813 30 H 0.434 0.566 31 H 0.133 0.867 32 H 0.413 0.587 33 H 0.099 0.901 34 H 0.076 0.924 35 H 0.078 0.922 36 H 0.115 0.885 37 H 0.064 0.936 38 H 0.059 0.941 39 H 0.397 0.603 40 H 0.126 0.874 41 H 0.089 0.911 42 H 0.152 0.848 43 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.551 0.821 -4.160 4.515 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.377 6.377 2 C -0.156 4.156 3 Si 0.686 3.314 4 C -0.195 4.195 5 C -0.061 4.061 6 N -0.181 5.181 7 C -0.039 4.039 8 C -0.087 4.087 9 C -0.137 4.137 10 C 0.354 3.646 11 O -0.458 6.458 12 N -0.365 5.365 13 C -0.011 4.011 14 C 0.060 3.940 15 F -0.178 7.178 16 C -0.180 4.180 17 C -0.131 4.131 18 H 0.105 0.895 19 C 0.006 3.994 20 O -0.407 6.407 21 C -0.171 4.171 22 C -0.127 4.127 23 C -0.094 4.094 24 C -0.088 4.088 25 H 0.251 0.749 26 H 0.102 0.898 27 H -0.216 1.216 28 H -0.218 1.218 29 H 0.203 0.797 30 H 0.274 0.726 31 H 0.151 0.849 32 H 0.251 0.749 33 H 0.118 0.882 34 H 0.094 0.906 35 H 0.097 0.903 36 H 0.133 0.867 37 H 0.083 0.917 38 H 0.077 0.923 39 H 0.247 0.753 40 H 0.144 0.856 41 H 0.108 0.892 42 H 0.169 0.831 43 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.017 1.430 -2.426 3.464 hybrid contribution 0.307 -0.736 0.545 0.966 sum 2.324 0.694 -1.881 3.069 Atomic orbital electron populations 1.86484 1.17786 1.82401 1.51079 1.24209 0.85307 1.10544 0.95548 0.93979 0.77242 0.74564 0.85566 1.20100 1.09951 0.91476 0.98011 1.22000 1.00075 0.94888 0.89180 1.41714 1.54554 1.03413 1.18460 1.18185 1.03836 0.86696 0.95218 1.20115 0.99972 0.88391 1.00209 1.19465 1.05801 0.91743 0.96662 1.18266 0.77028 0.85185 0.84128 1.90768 1.46558 1.86741 1.21698 1.45670 1.63653 1.05604 1.21591 1.21916 1.03067 0.79693 0.96457 1.22171 0.81458 0.95235 0.95118 1.92848 1.45586 1.92447 1.86937 1.23774 0.99251 0.95752 0.99186 1.22513 0.98686 0.94359 0.97576 0.89533 1.22226 0.97293 0.96812 0.83074 1.86441 1.64214 1.62466 1.27606 1.23573 1.04777 0.91344 0.97435 1.20924 0.99540 0.98128 0.94126 1.20434 0.98430 0.90179 1.00353 1.19553 1.01288 0.93847 0.94075 0.74919 0.89811 1.21630 1.21760 0.79658 0.72616 0.84938 0.74866 0.88244 0.90590 0.90303 0.86657 0.91743 0.92279 0.75289 0.85579 0.89231 0.83076 0.83401 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -0.15 12.86 -148.98 -1.92 -2.06 16 2 C -0.05 0.02 3.05 71.24 0.22 0.24 16 3 Si 0.78 -3.04 30.78 68.60 2.11 -0.93 16 4 C -0.19 -1.00 5.61 -18.64 -0.10 -1.11 16 5 C 0.07 0.21 10.43 83.09 0.87 1.08 16 6 N -0.58 -1.60 6.07 -187.72 -1.14 -2.74 16 7 C 0.07 0.48 7.26 38.96 0.28 0.77 16 8 C -0.07 -0.52 9.61 22.63 0.22 -0.30 16 9 C -0.13 -0.92 5.87 -20.07 -0.12 -1.04 16 10 C 0.57 4.73 7.76 86.71 0.67 5.40 16 11 O -0.58 -8.79 16.31 -3.99 -0.07 -8.85 16 12 N -0.71 -1.71 5.40 -466.22 -2.52 -4.22 16 13 C 0.11 0.02 5.40 86.38 0.47 0.48 16 14 C 0.08 -0.13 1.71 -10.26 -0.02 -0.14 16 15 F -0.20 -0.66 16.65 44.97 0.75 0.09 16 16 C -0.14 0.40 7.09 31.19 0.22 0.62 16 17 C -0.11 0.24 3.99 -10.20 -0.04 0.20 16 18 H 0.09 0.14 8.14 -2.39 -0.02 0.12 16 19 C 0.08 -0.31 6.89 71.98 0.50 0.19 16 20 O -0.60 -0.07 13.66 -148.98 -2.03 -2.10 16 21 C -0.13 0.61 7.10 31.12 0.22 0.83 16 22 C -0.11 -0.31 9.46 22.28 0.21 -0.10 16 23 C -0.08 -0.31 10.03 22.20 0.22 -0.09 16 24 C -0.08 -0.61 6.35 -20.14 -0.13 -0.74 16 25 H 0.40 -4.21 8.74 -74.06 -0.65 -4.85 16 26 H 0.08 -0.30 7.96 -2.39 -0.02 -0.32 16 27 H -0.29 -0.55 7.05 99.48 0.70 0.15 16 28 H -0.29 -0.51 7.11 99.48 0.71 0.19 16 29 H 0.19 -0.23 6.30 -2.91 -0.02 -0.25 16 30 H 0.43 -1.39 8.96 -92.71 -0.83 -2.22 16 31 H 0.13 1.04 7.62 -2.91 -0.02 1.01 16 32 H 0.41 -0.47 6.07 -92.71 -0.56 -1.04 16 33 H 0.10 -0.14 7.88 -2.39 -0.02 -0.15 16 34 H 0.08 0.14 8.14 -2.39 -0.02 0.12 16 35 H 0.08 -0.09 8.14 -2.38 -0.02 -0.11 16 36 H 0.12 -0.62 7.68 -2.39 -0.02 -0.64 16 37 H 0.06 -0.43 7.85 -2.39 -0.02 -0.45 16 38 H 0.06 -0.33 8.14 -2.39 -0.02 -0.35 16 39 H 0.40 -3.28 9.12 -74.05 -0.68 -3.96 16 40 H 0.13 -1.08 8.06 -2.39 -0.02 -1.10 16 41 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 42 H 0.15 -0.47 6.36 -2.91 -0.02 -0.49 16 43 H 0.15 0.00 8.06 -2.91 -0.02 -0.03 16 Total: 0.00 -26.54 364.85 -2.71 -29.25 By element: Atomic # 1 Polarization: -13.14 SS G_CDS: -1.58 Total: -14.73 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: 3.69 Total: 6.29 kcal Atomic # 7 Polarization: -3.31 SS G_CDS: -3.66 Total: -6.97 kcal Atomic # 8 Polarization: -9.00 SS G_CDS: -4.02 Total: -13.02 kcal Atomic # 9 Polarization: -0.66 SS G_CDS: 0.75 Total: 0.09 kcal Atomic # 14 Polarization: -3.04 SS G_CDS: 2.11 Total: -0.93 kcal Total: -26.54 -2.71 -29.25 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12335838.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.983 kcal (2) G-P(sol) polarization free energy of solvation -26.545 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.528 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.708 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.253 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.236 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds