Wall clock time and date at job start Sun Mar 7 2021 08:57:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86299 * 109.47163 * 2 1 4 4 C 1.50699 * 109.46985 * 239.99873 * 2 1 3 5 5 C 1.38320 * 119.91807 * 119.97824 * 4 2 1 6 6 C 1.38471 * 120.27982 * 180.02562 * 5 4 2 7 7 Br 1.89095 * 119.93745 * 180.02562 * 6 5 4 8 8 C 1.38039 * 120.12324 * 359.71556 * 6 5 4 9 9 C 1.39577 * 119.84072 * 0.58388 * 8 6 5 10 10 C 1.47851 * 120.13865 * 179.69935 * 9 8 6 11 11 O 1.21553 * 119.99629 * 179.72278 * 10 9 8 12 12 N 1.34772 * 119.99604 * 359.71908 * 10 9 8 13 13 C 1.46505 * 119.99813 * 180.02562 * 12 10 9 14 14 C 1.52995 * 109.47283 * 180.02562 * 13 12 10 15 15 F 1.39903 * 112.84944 * 316.19574 * 14 13 12 16 16 C 1.53781 * 113.69221 * 87.46423 * 14 13 12 17 17 C 1.54049 * 87.08031 * 139.98770 * 16 14 13 18 18 H 1.09000 * 113.61076 * 89.06984 * 17 16 14 19 19 C 1.52990 * 113.70090 * 220.05426 * 17 16 14 20 20 O 1.42903 * 109.47168 * 272.42623 * 19 17 16 21 21 C 1.53781 * 113.61503 * 185.00012 * 14 13 12 22 22 C 1.37981 * 119.92316 * 300.00191 * 4 2 1 23 23 H 0.96700 * 114.00020 * 59.99686 * 1 2 3 24 24 H 1.09006 * 109.47159 * 119.99953 * 2 1 3 25 25 H 1.48499 * 110.00216 * 298.68318 * 3 2 1 26 26 H 1.48508 * 109.99807 * 59.99994 * 3 2 1 27 27 H 1.07996 * 119.86232 * 359.97438 * 5 4 2 28 28 H 1.07995 * 120.07445 * 180.28195 * 8 6 5 29 29 H 0.97001 * 120.00396 * 0.02562 * 12 10 9 30 30 H 1.09000 * 109.47315 * 59.99868 * 13 12 10 31 31 H 1.09001 * 109.46863 * 300.00267 * 13 12 10 32 32 H 1.09005 * 113.61471 * 254.54353 * 16 14 13 33 33 H 1.08996 * 113.61178 * 25.35695 * 16 14 13 34 34 H 1.09007 * 109.47036 * 32.41747 * 19 17 16 35 35 H 1.08994 * 109.47734 * 152.42153 * 19 17 16 36 36 H 0.96700 * 114.00200 * 179.97438 * 20 19 17 37 37 H 1.09002 * 113.61445 * 334.48413 * 21 14 13 38 38 H 1.09002 * 113.61408 * 105.30144 * 21 14 13 39 39 H 1.07997 * 120.06542 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7261 -0.0365 -2.1401 6 6 3.1913 -0.6818 -3.2735 7 35 4.2777 0.2486 -4.5102 8 6 2.8687 -2.0049 -3.4989 9 6 2.0619 -2.6881 -2.5876 10 6 1.7068 -4.1034 -2.8259 11 8 1.0082 -4.6973 -2.0280 12 7 2.1578 -4.7348 -3.9278 13 6 1.8055 -6.1371 -4.1643 14 6 2.4409 -6.6087 -5.4738 15 9 2.3122 -5.6748 -6.5074 16 6 3.8707 -7.1499 -5.3071 17 6 3.4900 -8.2452 -6.3212 18 1 3.6759 -7.9641 -7.3578 19 6 4.0441 -9.6274 -5.9704 20 8 5.3550 -9.7689 -6.5212 21 6 2.0324 -8.0351 -5.8780 22 6 1.5970 -2.0315 -1.4472 23 1 -0.3933 0.4417 -0.7650 24 1 1.7924 -0.5138 0.8900 25 1 1.5879 2.4586 -1.2242 26 1 1.5615 2.4679 1.2086 27 1 2.9842 0.9976 -1.9661 28 1 3.2357 -2.5088 -4.3808 29 1 2.7156 -4.2609 -4.5644 30 1 0.7218 -6.2333 -4.2306 31 1 2.1748 -6.7483 -3.3408 32 1 4.6405 -6.4682 -5.6688 33 1 4.0792 -7.5317 -4.3077 34 1 4.0918 -9.7355 -4.8868 35 1 3.3913 -10.3962 -6.3838 36 1 5.7689 -10.6233 -6.3373 37 1 1.7379 -8.6604 -5.0351 38 1 1.3171 -8.0681 -6.6998 39 1 0.9764 -2.5562 -0.7360 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_12335870.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:15 Heat of formation + Delta-G solvation = -105.582579 kcal Electronic energy + Delta-G solvation = -25361.990394 eV Core-core repulsion = 21232.803007 eV Total energy + Delta-G solvation = -4129.187386 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.036 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -48.93299 -41.57148 -40.24258 -39.71942 -37.84119 -37.30522 -35.77588 -33.65726 -33.27894 -30.52393 -30.34881 -27.60606 -27.18983 -27.02357 -24.92027 -22.88106 -22.34573 -21.58771 -20.78650 -19.35498 -18.41633 -18.20915 -17.73493 -17.49589 -17.10792 -16.88686 -16.55796 -16.40586 -16.34749 -16.06102 -15.76120 -15.55899 -15.06959 -15.00980 -14.73579 -14.53613 -14.27331 -14.07958 -13.84600 -13.59026 -13.34935 -13.29887 -13.04305 -12.50690 -12.31452 -12.03737 -12.00167 -11.85254 -11.66554 -11.48422 -11.47610 -11.15527 -10.98208 -10.76007 -10.42939 -10.22236 -9.95133 -5.07698 -0.54786 -0.21267 0.38095 1.11862 1.48318 1.53474 1.80659 1.88742 2.45371 2.84872 2.94662 2.99715 3.15381 3.18295 3.25302 3.35391 3.39784 3.62380 3.72870 3.81024 3.92419 4.08959 4.16973 4.17600 4.21931 4.29490 4.37414 4.39444 4.44830 4.48502 4.51093 4.67623 4.69984 4.76386 4.80066 4.89174 5.02260 5.10370 5.23554 5.35122 6.22950 6.27254 6.56893 6.98771 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.073 4.073 3 Si 0.680 3.320 4 C -0.118 4.118 5 C -0.063 4.063 6 C -0.094 4.094 7 Br -0.031 7.031 8 C -0.053 4.053 9 C -0.128 4.128 10 C 0.563 3.437 11 O -0.526 6.526 12 N -0.723 5.723 13 C 0.113 3.887 14 C 0.079 3.921 15 F -0.184 7.184 16 C -0.146 4.146 17 C -0.108 4.108 18 H 0.105 0.895 19 C 0.085 3.915 20 O -0.573 6.573 21 C -0.142 4.142 22 C -0.017 4.017 23 H 0.378 0.622 24 H 0.126 0.874 25 H -0.255 1.255 26 H -0.250 1.250 27 H 0.143 0.857 28 H 0.139 0.861 29 H 0.405 0.595 30 H 0.084 0.916 31 H 0.093 0.907 32 H 0.085 0.915 33 H 0.103 0.897 34 H 0.050 0.950 35 H 0.051 0.949 36 H 0.382 0.618 37 H 0.106 0.894 38 H 0.090 0.910 39 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.127 -1.959 -0.540 3.729 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.183 4.183 3 Si 0.580 3.420 4 C -0.119 4.119 5 C -0.082 4.082 6 C -0.174 4.174 7 Br 0.054 6.946 8 C -0.073 4.073 9 C -0.132 4.132 10 C 0.350 3.650 11 O -0.403 6.403 12 N -0.376 5.376 13 C -0.011 4.011 14 C 0.060 3.940 15 F -0.164 7.164 16 C -0.184 4.184 17 C -0.127 4.127 18 H 0.124 0.876 19 C 0.008 3.992 20 O -0.379 6.379 21 C -0.180 4.180 22 C -0.036 4.036 23 H 0.226 0.774 24 H 0.144 0.856 25 H -0.180 1.180 26 H -0.175 1.175 27 H 0.160 0.840 28 H 0.156 0.844 29 H 0.241 0.759 30 H 0.103 0.897 31 H 0.111 0.889 32 H 0.104 0.896 33 H 0.121 0.879 34 H 0.068 0.932 35 H 0.069 0.931 36 H 0.230 0.770 37 H 0.125 0.875 38 H 0.109 0.891 39 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 2.769 -0.896 -0.127 2.913 hybrid contribution -0.921 -0.680 -0.631 1.307 sum 1.849 -1.575 -0.758 2.544 Atomic orbital electron populations 1.86643 1.17171 1.79892 1.49369 1.25056 0.84347 1.11065 0.97860 0.95086 0.91621 0.74263 0.81040 1.20320 0.99315 0.94798 0.97508 1.21225 0.95133 0.99980 0.91879 1.21650 1.02998 0.95564 0.97161 1.96851 1.65635 1.75355 1.56718 1.21308 0.95026 0.92592 0.98386 1.19906 1.01921 0.94136 0.97236 1.18081 0.79768 0.85988 0.81126 1.90831 1.37144 1.67091 1.45205 1.45733 1.54108 1.12960 1.24846 1.21862 1.01403 0.82258 0.95535 1.22086 0.99030 0.87974 0.84877 1.92879 1.96762 1.66829 1.59911 1.23781 0.95103 0.98405 1.01098 1.22550 0.94735 0.94460 1.00916 0.87647 1.22133 0.84093 0.96093 0.96912 1.86488 1.30786 1.41183 1.79435 1.23558 0.97369 0.93849 1.03230 1.21291 0.94394 0.92912 0.94986 0.77448 0.85632 1.17968 1.17494 0.84005 0.84363 0.75911 0.89733 0.88919 0.89586 0.87881 0.93193 0.93119 0.77036 0.87548 0.89124 0.83331 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.32 12.76 -35.23 -0.45 -0.77 16 2 C -0.07 0.08 2.82 36.01 0.10 0.18 16 3 Si 0.68 -1.14 29.78 -169.99 -5.06 -6.20 16 4 C -0.12 0.07 5.38 -104.69 -0.56 -0.49 16 5 C -0.06 0.06 8.41 -39.47 -0.33 -0.27 16 6 C -0.09 0.04 6.22 -39.57 -0.25 -0.20 16 7 Br -0.03 0.01 33.69 -68.01 -2.29 -2.28 16 8 C -0.05 0.04 9.28 -39.16 -0.36 -0.33 16 9 C -0.13 -0.09 5.87 -104.97 -0.62 -0.70 16 10 C 0.56 1.11 7.77 -12.33 -0.10 1.01 16 11 O -0.53 -2.82 16.35 5.32 0.09 -2.73 16 12 N -0.72 0.25 5.40 -61.25 -0.33 -0.08 16 13 C 0.11 -0.12 5.43 -4.04 -0.02 -0.14 16 14 C 0.08 -0.13 1.74 -89.81 -0.16 -0.28 16 15 F -0.18 -0.12 16.58 2.25 0.04 -0.08 16 16 C -0.15 0.29 7.09 -25.78 -0.18 0.10 16 17 C -0.11 0.17 4.00 -89.67 -0.36 -0.19 16 18 H 0.11 -0.01 8.14 -51.93 -0.42 -0.43 16 19 C 0.09 -0.17 6.89 37.15 0.26 0.09 16 20 O -0.57 0.13 13.66 -35.23 -0.48 -0.35 16 21 C -0.14 0.38 7.09 -25.92 -0.18 0.19 16 22 C -0.02 -0.01 9.15 -39.18 -0.36 -0.37 16 23 H 0.38 -0.84 8.70 45.56 0.40 -0.44 16 24 H 0.13 -0.24 7.96 -51.93 -0.41 -0.65 16 25 H -0.26 -0.04 7.11 56.52 0.40 0.36 16 26 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 27 H 0.14 -0.34 4.86 -52.49 -0.26 -0.59 16 28 H 0.14 -0.35 6.41 -52.49 -0.34 -0.68 16 29 H 0.40 -0.75 6.06 -40.82 -0.25 -1.00 16 30 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.09 -0.15 7.85 -51.93 -0.41 -0.56 16 32 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 33 H 0.10 -0.30 7.67 -51.93 -0.40 -0.70 16 34 H 0.05 -0.16 7.85 -51.93 -0.41 -0.57 16 35 H 0.05 -0.14 8.14 -51.93 -0.42 -0.56 16 36 H 0.38 -1.65 9.12 45.56 0.42 -1.24 16 37 H 0.11 -0.45 8.06 -51.93 -0.42 -0.87 16 38 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 39 H 0.15 0.24 7.65 -52.49 -0.40 -0.16 16 LS Contribution 352.47 15.07 5.31 5.31 Total: 0.00 -8.25 352.47 -10.09 -18.34 By element: Atomic # 1 Polarization: -5.96 SS G_CDS: -3.78 Total: -9.74 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -3.12 Total: -1.41 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: -0.33 Total: -0.08 kcal Atomic # 8 Polarization: -3.01 SS G_CDS: -0.84 Total: -3.85 kcal Atomic # 9 Polarization: -0.12 SS G_CDS: 0.04 Total: -0.08 kcal Atomic # 14 Polarization: -1.14 SS G_CDS: -5.06 Total: -6.20 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -8.25 -10.09 -18.34 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12335870.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.245 kcal (2) G-P(sol) polarization free energy of solvation -8.252 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.497 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.086 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.338 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.583 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds