Wall clock time and date at job start Sun Mar 7 2021 08:57:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52997 * 109.46612 * 2 1 4 4 C 1.52999 * 109.47178 * 188.54536 * 3 2 1 5 5 C 1.53000 * 109.47180 * 68.54550 * 3 2 1 6 6 C 1.50701 * 109.47476 * 185.63340 * 5 3 2 7 7 O 1.21279 * 120.00295 * 246.97027 * 6 5 3 8 8 N 1.34782 * 119.99558 * 66.96945 * 6 5 3 9 9 C 1.46506 * 119.99678 * 174.97754 * 8 6 5 10 10 C 1.53002 * 109.46700 * 180.02562 * 9 8 6 11 11 F 1.39899 * 112.91140 * 48.74535 * 10 9 8 12 12 C 1.53778 * 113.61145 * 179.97438 * 10 9 8 13 13 C 1.53783 * 87.08301 * 139.97684 * 12 10 9 14 14 H 1.09003 * 113.61037 * 89.11066 * 13 12 10 15 15 C 1.52992 * 113.62004 * 219.93412 * 13 12 10 16 16 O 1.42899 * 109.47308 * 183.47188 * 15 13 12 17 17 C 1.53781 * 113.61128 * 277.49194 * 10 9 8 18 18 N 1.46507 * 109.46990 * 65.63577 * 5 3 2 19 19 C 1.36344 * 125.63693 * 57.00978 * 18 5 3 20 20 C 1.34843 * 108.21886 * 180.02562 * 19 18 5 21 21 C 1.40887 * 107.41868 * 359.97438 * 20 19 18 22 22 C 1.34852 * 107.41679 * 359.73441 * 21 20 19 23 23 C 1.50697 * 125.89262 * 180.24958 * 22 21 20 24 24 O 1.42901 * 109.47466 * 227.65440 * 23 22 21 25 25 Si 1.86299 * 109.47093 * 347.65334 * 23 22 21 26 26 H 1.08994 * 109.47196 * 310.66995 * 1 2 3 27 27 H 1.08998 * 109.47216 * 70.67837 * 1 2 3 28 28 H 1.09005 * 109.46491 * 190.67350 * 1 2 3 29 29 H 1.09000 * 109.47284 * 240.00401 * 2 1 3 30 30 H 1.08996 * 109.47396 * 119.99769 * 2 1 3 31 31 H 1.09004 * 109.47736 * 308.54739 * 3 2 1 32 32 H 1.09003 * 109.46966 * 313.75279 * 4 3 2 33 33 H 1.09001 * 109.47392 * 73.75543 * 4 3 2 34 34 H 1.09002 * 109.47548 * 193.75518 * 4 3 2 35 35 H 1.08996 * 109.47631 * 305.63665 * 5 3 2 36 36 H 0.97000 * 120.00288 * 354.97506 * 8 6 5 37 37 H 1.08997 * 109.47137 * 59.99947 * 9 8 6 38 38 H 1.09000 * 109.46560 * 299.99829 * 9 8 6 39 39 H 1.09001 * 113.61757 * 25.43231 * 12 10 9 40 40 H 1.08996 * 113.69247 * 254.53718 * 12 10 9 41 41 H 1.09002 * 109.47256 * 303.47397 * 15 13 12 42 42 H 1.09005 * 109.46919 * 63.47329 * 15 13 12 43 43 H 0.96698 * 114.00096 * 179.97438 * 16 15 13 44 44 H 1.08999 * 113.60942 * 105.47444 * 17 10 9 45 45 H 1.08992 * 113.61803 * 334.57238 * 17 10 9 46 46 H 1.08003 * 125.88553 * 0.02562 * 19 18 5 47 47 H 1.08000 * 126.28740 * 180.02562 * 20 19 18 48 48 H 1.07999 * 126.29483 * 179.97438 * 21 20 19 49 49 H 1.09000 * 109.47458 * 107.65225 * 23 22 21 50 50 H 0.96696 * 114.00159 * 67.38217 * 24 23 22 51 51 H 1.48500 * 109.99949 * 179.97438 * 25 23 22 52 52 H 1.48502 * 110.00232 * 301.31491 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 3.5548 1.4480 -0.2143 5 6 1.7124 2.0992 1.3425 6 6 2.0893 3.5575 1.2937 7 8 2.9961 3.9730 1.9836 8 7 1.4185 4.4001 0.4833 9 6 1.7100 5.8355 0.5162 10 6 0.8163 6.5605 -0.4921 11 9 -0.5309 6.1991 -0.3843 12 6 1.0443 8.0806 -0.5359 13 6 0.8944 7.9800 -2.0631 14 1 -0.1339 8.0862 -2.4087 15 6 1.8751 8.8650 -2.8349 16 8 1.6063 8.7654 -4.2348 17 6 1.3522 6.5173 -1.9329 18 7 2.4675 1.4352 2.4080 19 6 3.8236 1.3030 2.4570 20 6 4.1418 0.6363 3.5850 21 6 2.9382 0.3467 4.2575 22 6 1.9306 0.8527 3.5177 23 6 0.4639 0.7821 3.8565 24 8 -0.2696 0.3480 2.7095 25 14 0.2063 -0.4253 5.2517 26 1 -0.3633 0.6697 0.7794 27 1 -0.3633 0.3400 -0.9698 28 1 -0.3632 -1.0100 0.1904 29 1 1.8934 -0.5138 -0.8900 30 1 1.8934 -0.5138 0.8900 31 1 1.5572 1.9986 -0.8037 32 1 4.0161 0.7027 0.4337 33 1 3.7754 1.2110 -1.2552 34 1 3.9522 2.4342 0.0258 35 1 0.6448 2.0063 1.5417 36 1 0.7427 4.0561 -0.1216 37 1 2.7563 5.9997 0.2588 38 1 1.5167 6.2225 1.5166 39 1 2.0412 8.3821 -0.2140 40 1 0.2526 8.6562 -0.0564 41 1 1.7589 9.9006 -2.5154 42 1 2.8951 8.5358 -2.6364 43 1 2.1914 9.3021 -4.7868 44 1 0.8081 5.8300 -2.5806 45 1 2.4332 6.3911 -1.9931 46 1 4.5224 1.6692 1.7193 47 1 5.1367 0.3735 3.9131 48 1 2.8406 -0.1799 5.1953 49 1 0.1132 1.7684 4.1602 50 1 -0.0909 -0.5665 2.4512 51 1 -1.2362 -0.5036 5.5958 52 1 0.7095 -1.7670 4.8619 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_12360566.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:18 Heat of formation + Delta-G solvation = -82.161595 kcal Electronic energy + Delta-G solvation = -34329.146816 eV Core-core repulsion = 29825.905177 eV Total energy + Delta-G solvation = -4503.241639 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.199 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -48.93543 -42.79476 -40.67996 -39.90618 -37.95813 -37.69385 -37.30464 -35.68647 -33.04303 -31.46183 -30.86905 -30.51187 -28.41761 -27.27652 -26.75354 -25.81716 -24.77498 -22.51039 -22.19284 -21.67921 -21.37365 -20.85242 -20.14752 -19.12363 -18.42914 -18.21901 -17.55675 -17.18221 -16.95294 -16.86618 -16.53429 -16.45149 -16.27607 -15.96628 -15.52339 -15.29175 -15.23491 -15.00202 -14.83605 -14.48735 -14.41607 -14.26879 -14.14028 -14.05502 -13.83902 -13.66762 -13.60857 -13.38319 -13.35169 -13.08759 -12.89023 -12.53366 -12.31112 -12.14575 -12.05710 -11.93380 -11.83421 -11.72581 -11.65079 -11.62875 -11.49074 -11.03767 -10.96828 -10.75832 -10.31027 -9.39537 -8.78158 -4.87799 1.17389 1.27824 1.42445 1.70135 1.80675 1.96193 2.22053 2.30299 2.82894 2.93437 2.98713 3.15887 3.19639 3.30978 3.39425 3.48916 3.60667 3.61963 3.82178 3.86838 4.06332 4.11415 4.14910 4.22765 4.27612 4.33532 4.35022 4.36638 4.39709 4.44417 4.48881 4.52370 4.53186 4.61291 4.65635 4.71261 4.73770 4.78896 4.79616 4.84914 4.91896 5.02126 5.08940 5.11527 5.17323 5.22126 5.40127 5.47591 5.53278 6.13009 6.16796 6.33539 6.46422 6.54093 6.54678 6.98437 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.116 4.116 3 C -0.092 4.092 4 C -0.169 4.169 5 C 0.116 3.884 6 C 0.506 3.494 7 O -0.515 6.515 8 N -0.725 5.725 9 C 0.115 3.885 10 C 0.080 3.920 11 F -0.183 7.183 12 C -0.142 4.142 13 C -0.108 4.108 14 H 0.105 0.895 15 C 0.085 3.915 16 O -0.573 6.573 17 C -0.145 4.145 18 N -0.410 5.410 19 C 0.016 3.984 20 C -0.205 4.205 21 C -0.183 4.183 22 C -0.019 4.019 23 C -0.058 4.058 24 O -0.532 6.532 25 Si 0.710 3.290 26 H 0.082 0.918 27 H 0.054 0.946 28 H 0.055 0.945 29 H 0.069 0.931 30 H 0.067 0.933 31 H 0.088 0.912 32 H 0.078 0.922 33 H 0.064 0.936 34 H 0.059 0.941 35 H 0.139 0.861 36 H 0.405 0.595 37 H 0.091 0.909 38 H 0.081 0.919 39 H 0.106 0.894 40 H 0.090 0.910 41 H 0.051 0.949 42 H 0.049 0.951 43 H 0.382 0.618 44 H 0.085 0.915 45 H 0.102 0.898 46 H 0.166 0.834 47 H 0.136 0.864 48 H 0.141 0.859 49 H 0.113 0.887 50 H 0.375 0.625 51 H -0.257 1.257 52 H -0.256 1.256 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.023 1.639 -2.159 2.898 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C -0.154 4.154 3 C -0.112 4.112 4 C -0.225 4.225 5 C 0.009 3.991 6 C 0.290 3.710 7 O -0.389 6.389 8 N -0.379 5.379 9 C -0.009 4.009 10 C 0.061 3.939 11 F -0.164 7.164 12 C -0.180 4.180 13 C -0.126 4.126 14 H 0.123 0.877 15 C 0.008 3.992 16 O -0.379 6.379 17 C -0.183 4.183 18 N -0.086 5.086 19 C -0.114 4.114 20 C -0.229 4.229 21 C -0.208 4.208 22 C -0.129 4.129 23 C -0.167 4.167 24 O -0.340 6.340 25 Si 0.610 3.390 26 H 0.100 0.900 27 H 0.073 0.927 28 H 0.075 0.925 29 H 0.087 0.913 30 H 0.086 0.914 31 H 0.107 0.893 32 H 0.096 0.904 33 H 0.083 0.917 34 H 0.078 0.922 35 H 0.156 0.844 36 H 0.240 0.760 37 H 0.109 0.891 38 H 0.099 0.901 39 H 0.124 0.876 40 H 0.109 0.891 41 H 0.069 0.931 42 H 0.068 0.932 43 H 0.230 0.770 44 H 0.104 0.896 45 H 0.120 0.880 46 H 0.183 0.817 47 H 0.154 0.846 48 H 0.158 0.842 49 H 0.131 0.869 50 H 0.225 0.775 51 H -0.182 1.182 52 H -0.180 1.180 Dipole moment (debyes) X Y Z Total from point charges 0.371 1.553 -1.387 2.115 hybrid contribution -0.032 -0.001 -1.593 1.593 sum 0.339 1.552 -2.980 3.377 Atomic orbital electron populations 1.22131 0.95155 1.02891 1.02719 1.21555 0.96470 0.94564 1.02800 1.21470 0.97945 0.97937 0.93813 1.22388 0.94499 1.02733 1.02923 1.21537 0.99460 0.88969 0.89090 1.20742 0.82333 0.88168 0.79732 1.90791 1.28574 1.77834 1.41720 1.45763 1.42340 1.07240 1.42526 1.21810 0.99419 0.79881 0.99806 1.22067 0.77926 0.96672 0.97218 1.92887 1.33752 1.92719 1.97004 1.23548 1.04673 0.93649 0.96135 1.22511 1.01175 0.94882 0.94076 0.87676 1.22131 0.97144 0.98542 0.81412 1.86485 1.61987 1.72166 1.17243 1.23705 1.02595 0.97899 0.94088 1.43408 1.05816 1.42664 1.16704 1.22077 0.83569 1.04614 1.01154 1.20832 0.98328 1.07147 0.96615 1.20575 0.92050 1.07181 1.01011 1.20697 0.95226 1.06104 0.90859 1.24681 0.86703 1.08284 0.97034 1.86575 1.68134 1.33674 1.45640 0.94101 0.82036 0.78203 0.84692 0.89974 0.92739 0.92545 0.91272 0.91415 0.89340 0.90365 0.91737 0.92239 0.84358 0.75994 0.89108 0.90050 0.87603 0.89101 0.93105 0.93240 0.77028 0.89646 0.87984 0.81708 0.84569 0.84179 0.86888 0.77535 1.18223 1.17975 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.30 8.46 37.16 0.31 0.61 16 2 C -0.12 0.15 5.31 -26.73 -0.14 0.01 16 3 C -0.09 0.12 2.16 -90.62 -0.20 -0.08 16 4 C -0.17 0.12 7.42 37.16 0.28 0.40 16 5 C 0.12 0.04 2.30 -69.08 -0.16 -0.12 16 6 C 0.51 0.86 5.93 -10.98 -0.07 0.79 16 7 O -0.51 -2.74 15.43 5.56 0.09 -2.65 16 8 N -0.73 0.43 5.41 -60.29 -0.33 0.11 16 9 C 0.11 -0.11 5.37 -4.04 -0.02 -0.13 16 10 C 0.08 -0.12 1.67 -89.81 -0.15 -0.27 16 11 F -0.18 -0.16 16.80 2.25 0.04 -0.12 16 12 C -0.14 0.36 7.10 -25.92 -0.18 0.17 16 13 C -0.11 0.16 3.98 -89.79 -0.36 -0.20 16 14 H 0.11 0.00 8.14 -51.93 -0.42 -0.43 16 15 C 0.09 -0.16 6.88 37.15 0.26 0.09 16 16 O -0.57 0.13 13.66 -35.23 -0.48 -0.35 16 17 C -0.15 0.28 7.08 -25.90 -0.18 0.10 16 18 N -0.41 -0.76 1.77 -106.71 -0.19 -0.95 16 19 C 0.02 0.04 7.64 -16.75 -0.13 -0.09 16 20 C -0.21 -0.56 10.86 -39.78 -0.43 -0.99 16 21 C -0.18 -0.38 9.38 -39.78 -0.37 -0.75 16 22 C -0.02 -0.03 6.28 -81.79 -0.51 -0.55 16 23 C -0.06 -0.01 2.66 36.00 0.10 0.09 16 24 O -0.53 0.11 8.36 -35.23 -0.29 -0.19 16 25 Si 0.71 -0.43 30.56 -169.99 -5.20 -5.63 16 26 H 0.08 -0.10 3.79 -51.93 -0.20 -0.30 16 27 H 0.05 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.06 -0.10 8.09 -51.93 -0.42 -0.52 16 29 H 0.07 -0.09 8.13 -51.93 -0.42 -0.52 16 30 H 0.07 0.00 7.56 -51.93 -0.39 -0.39 16 31 H 0.09 -0.22 7.76 -51.93 -0.40 -0.62 16 32 H 0.08 0.00 5.46 -51.93 -0.28 -0.29 16 33 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 34 H 0.06 0.03 6.43 -51.93 -0.33 -0.31 16 35 H 0.14 0.02 4.57 -51.93 -0.24 -0.22 16 36 H 0.41 -0.85 7.88 -40.82 -0.32 -1.17 16 37 H 0.09 -0.12 7.94 -51.93 -0.41 -0.53 16 38 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 39 H 0.11 -0.42 8.06 -51.93 -0.42 -0.84 16 40 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 41 H 0.05 -0.14 8.14 -51.93 -0.42 -0.56 16 42 H 0.05 -0.15 7.88 -51.93 -0.41 -0.56 16 43 H 0.38 -1.65 9.12 45.56 0.42 -1.24 16 44 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 45 H 0.10 -0.29 7.74 -51.93 -0.40 -0.69 16 46 H 0.17 0.31 5.40 -52.48 -0.28 0.03 16 47 H 0.14 0.20 8.06 -52.49 -0.42 -0.22 16 48 H 0.14 0.01 6.34 -52.49 -0.33 -0.32 16 49 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 50 H 0.38 -0.65 7.52 45.56 0.34 -0.30 16 51 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 52 H -0.26 -0.40 7.11 56.52 0.40 0.00 16 LS Contribution 399.35 15.07 6.02 6.02 Total: 0.00 -8.05 399.35 -9.81 -17.86 By element: Atomic # 1 Polarization: -5.67 SS G_CDS: -7.50 Total: -13.17 kcal Atomic # 6 Polarization: 1.04 SS G_CDS: -1.96 Total: -0.92 kcal Atomic # 7 Polarization: -0.33 SS G_CDS: -0.51 Total: -0.84 kcal Atomic # 8 Polarization: -2.50 SS G_CDS: -0.69 Total: -3.19 kcal Atomic # 9 Polarization: -0.16 SS G_CDS: 0.04 Total: -0.12 kcal Atomic # 14 Polarization: -0.43 SS G_CDS: -5.20 Total: -5.63 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -8.05 -9.81 -17.86 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12360566.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.303 kcal (2) G-P(sol) polarization free energy of solvation -8.047 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.350 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.812 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.859 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.162 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds