Wall clock time and date at job start Sun Mar 7 2021 08:57:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35660 * 116.99967 * 2 1 4 4 C 1.40135 * 120.14875 * 180.02562 * 3 2 1 5 5 C 1.47537 * 120.19433 * 359.97438 * 4 3 2 6 6 O 1.21593 * 119.99856 * 359.72988 * 5 4 3 7 7 N 1.34777 * 120.00133 * 179.45540 * 5 4 3 8 8 C 1.46504 * 119.99854 * 180.27865 * 7 5 4 9 9 C 1.53004 * 109.46928 * 179.97438 * 8 7 5 10 10 F 1.39901 * 112.84810 * 316.19231 * 9 8 7 11 11 C 1.53779 * 113.61550 * 87.49868 * 9 8 7 12 12 C 1.53778 * 87.07836 * 139.98283 * 11 9 8 13 13 H 1.09003 * 113.61974 * 89.11888 * 12 11 9 14 14 C 1.53003 * 113.69031 * 220.01069 * 12 11 9 15 15 O 1.42904 * 109.46823 * 272.53639 * 14 12 11 16 16 C 1.53778 * 113.61216 * 185.00042 * 9 8 7 17 17 C 1.39712 * 119.61620 * 179.72048 * 4 3 2 18 18 C 1.37787 * 119.90780 * 0.27321 * 17 4 3 19 19 C 1.50692 * 119.84877 * 179.97438 * 18 17 4 20 20 O 1.42901 * 109.47315 * 65.00094 * 19 18 17 21 21 Si 1.86301 * 109.47009 * 184.99971 * 19 18 17 22 22 C 1.38556 * 120.29807 * 0.02562 * 18 17 4 23 23 C 1.38045 * 120.38846 * 359.97438 * 22 18 17 24 24 H 1.08996 * 109.47169 * 59.99591 * 1 2 3 25 25 H 1.08998 * 109.46630 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.46886 * 300.00043 * 1 2 3 27 27 H 0.97000 * 119.99736 * 0.27139 * 7 5 4 28 28 H 1.08992 * 109.46803 * 299.99362 * 8 7 5 29 29 H 1.08997 * 109.47198 * 59.99605 * 8 7 5 30 30 H 1.09001 * 113.61238 * 254.52577 * 11 9 8 31 31 H 1.08995 * 113.61251 * 25.43487 * 11 9 8 32 32 H 1.08997 * 109.47105 * 32.53295 * 14 12 11 33 33 H 1.08995 * 109.47380 * 152.53436 * 14 12 11 34 34 H 0.96704 * 113.99611 * 180.02562 * 15 14 12 35 35 H 1.08998 * 113.61735 * 334.56396 * 16 9 8 36 36 H 1.08999 * 113.61540 * 105.38257 * 16 9 8 37 37 H 1.08001 * 120.04687 * 180.24786 * 17 4 3 38 38 H 1.09003 * 109.47676 * 304.99493 * 19 18 17 39 39 H 0.96695 * 113.99977 * 60.00226 * 20 19 18 40 40 H 1.48501 * 110.00009 * 58.67991 * 21 19 18 41 41 H 1.48500 * 110.00274 * 180.02562 * 21 19 18 42 42 H 1.07997 * 119.79727 * 180.02562 * 22 18 17 43 43 H 1.08003 * 119.95593 * 180.02562 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4441 1.2857 -0.0005 5 6 4.2551 0.0532 -0.0005 6 8 3.7095 -1.0334 0.0049 7 7 5.6005 0.1318 -0.0122 8 6 6.4057 -1.0922 -0.0183 9 6 7.8910 -0.7254 -0.0320 10 9 8.1873 0.3073 -0.9280 11 6 8.4869 -0.5168 1.3702 12 6 9.7404 -1.2473 0.8602 13 1 10.4779 -0.5848 0.4070 14 6 10.3524 -2.2058 1.8837 15 8 11.2728 -1.4932 2.7127 16 6 8.8244 -1.9406 -0.1621 17 6 4.0668 2.5364 -0.0065 18 6 3.3038 3.6837 -0.0060 19 6 3.9768 5.0320 -0.0118 20 8 4.6941 5.2011 -1.2362 21 14 2.6892 6.3694 0.1434 22 6 1.9206 3.6033 0.0008 23 6 1.2926 2.3740 0.0067 24 1 -0.3633 0.5139 -0.8899 25 1 -0.3632 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 6.0357 0.9987 -0.0165 28 1 6.1838 -1.6774 0.8740 29 1 6.1684 -1.6787 -0.9059 30 1 8.6624 0.5299 1.6188 31 1 7.9562 -1.0561 2.1548 32 1 9.5615 -2.6313 2.5013 33 1 10.8773 -3.0067 1.3630 34 1 11.7001 -2.0400 3.3862 35 1 8.3859 -2.8691 0.2036 36 1 9.2710 -2.0442 -1.1510 37 1 5.1447 2.6038 -0.0110 38 1 4.6698 5.0959 0.8271 39 1 4.1390 5.1560 -2.0266 40 1 1.9150 6.1861 1.3973 41 1 3.3400 7.7042 0.1383 42 1 1.3304 4.5078 0.0007 43 1 0.2139 2.3195 0.0116 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_12496546.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:28 Heat of formation + Delta-G solvation = -141.259841 kcal Electronic energy + Delta-G solvation = -28019.246120 eV Core-core repulsion = 23754.109844 eV Total energy + Delta-G solvation = -4265.136277 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.141 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -48.82798 -41.72040 -40.23886 -39.62280 -39.19648 -37.24908 -37.14318 -35.47223 -32.86242 -31.88227 -30.19538 -28.61136 -27.34354 -27.07411 -26.20852 -24.89999 -22.79825 -22.08906 -21.44072 -20.71033 -19.59059 -18.46691 -18.36141 -18.11558 -17.56879 -17.08362 -16.88960 -16.73481 -16.50259 -16.32841 -16.14816 -15.88289 -15.86845 -15.72246 -15.41283 -14.96929 -14.64495 -14.57263 -14.30723 -14.24710 -13.80135 -13.69828 -13.56978 -13.37957 -13.23541 -13.15759 -12.44277 -12.42465 -12.17402 -12.07699 -11.96411 -11.84063 -11.55374 -11.38179 -10.95524 -10.83846 -10.42627 -10.25533 -10.03992 -9.28774 -5.10326 -0.25865 0.19117 1.22977 1.57118 1.85952 1.92514 2.05730 2.21075 2.72411 2.92625 3.03891 3.10989 3.27667 3.38404 3.44273 3.51336 3.62225 3.65925 3.70565 3.95238 4.06769 4.17031 4.19142 4.19625 4.24893 4.34173 4.36973 4.43768 4.47036 4.47756 4.54910 4.57027 4.58131 4.67050 4.75601 4.84149 4.88316 4.89254 5.05366 5.23510 5.26088 5.39225 5.49656 6.27078 6.50731 6.53001 6.60853 7.30366 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.174 4.174 5 C 0.563 3.437 6 O -0.516 6.516 7 N -0.729 5.729 8 C 0.116 3.884 9 C 0.080 3.920 10 F -0.183 7.183 11 C -0.146 4.146 12 C -0.109 4.109 13 H 0.105 0.895 14 C 0.085 3.915 15 O -0.573 6.573 16 C -0.142 4.142 17 C -0.019 4.019 18 C -0.168 4.168 19 C -0.063 4.063 20 O -0.540 6.540 21 Si 0.684 3.316 22 C -0.045 4.045 23 C -0.214 4.214 24 H 0.059 0.941 25 H 0.105 0.895 26 H 0.058 0.942 27 H 0.403 0.597 28 H 0.089 0.911 29 H 0.082 0.918 30 H 0.085 0.915 31 H 0.102 0.898 32 H 0.050 0.950 33 H 0.050 0.950 34 H 0.382 0.618 35 H 0.106 0.894 36 H 0.090 0.910 37 H 0.135 0.865 38 H 0.114 0.886 39 H 0.380 0.620 40 H -0.257 1.257 41 H -0.253 1.253 42 H 0.134 0.866 43 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.238 -0.159 0.018 2.244 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.190 6.190 3 C 0.144 3.856 4 C -0.178 4.178 5 C 0.351 3.649 6 O -0.392 6.392 7 N -0.383 5.383 8 C -0.008 4.008 9 C 0.061 3.939 10 F -0.164 7.164 11 C -0.184 4.184 12 C -0.127 4.127 13 H 0.123 0.877 14 C 0.008 3.992 15 O -0.379 6.379 16 C -0.180 4.180 17 C -0.037 4.037 18 C -0.169 4.169 19 C -0.174 4.174 20 O -0.345 6.345 21 Si 0.586 3.414 22 C -0.063 4.063 23 C -0.233 4.233 24 H 0.078 0.922 25 H 0.123 0.877 26 H 0.077 0.923 27 H 0.239 0.761 28 H 0.107 0.893 29 H 0.100 0.900 30 H 0.103 0.897 31 H 0.121 0.879 32 H 0.068 0.932 33 H 0.069 0.931 34 H 0.229 0.771 35 H 0.124 0.876 36 H 0.108 0.892 37 H 0.153 0.847 38 H 0.132 0.868 39 H 0.227 0.773 40 H -0.182 1.182 41 H -0.178 1.178 42 H 0.152 0.848 43 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.541 0.078 0.504 2.591 hybrid contribution 0.552 -0.224 0.539 0.804 sum -1.988 -0.147 1.043 2.250 Atomic orbital electron populations 1.23237 0.78168 1.04759 1.01471 1.86382 1.21218 1.25187 1.86197 1.19075 0.90875 0.85082 0.90525 1.19285 0.90866 0.93772 1.13905 1.17930 0.81564 0.88789 0.76637 1.90849 1.71470 1.28561 1.48278 1.45730 1.06023 1.09755 1.76804 1.21782 0.87035 0.87780 1.04221 1.22079 0.94054 0.87556 0.90193 1.92878 1.94319 1.59919 1.69249 1.23725 0.96295 1.03262 0.95100 1.22510 0.96230 0.98062 0.95885 0.87692 1.22142 0.91814 0.93485 0.91792 1.86493 1.60601 1.40573 1.50218 1.23556 0.95998 0.97212 1.01239 1.20994 0.99939 0.89890 0.92920 1.20131 0.93547 0.96062 1.07175 1.24975 1.03202 0.98968 0.90221 1.86516 1.37915 1.95102 1.14964 0.94857 0.81214 0.77722 0.87608 1.20976 0.93586 0.97262 0.94479 1.21228 1.00756 0.91538 1.09739 0.92223 0.87668 0.92339 0.76138 0.89251 0.89993 0.89677 0.87949 0.93216 0.93136 0.77093 0.87600 0.89151 0.84722 0.86834 0.77301 1.18179 1.17789 0.84840 0.84070 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.99 8.57 -40.56 -0.35 -1.34 16 3 C 0.19 0.48 6.70 -38.70 -0.26 0.22 16 4 C -0.17 -0.46 5.89 -104.84 -0.62 -1.08 16 5 C 0.56 2.30 7.76 -12.47 -0.10 2.20 16 6 O -0.52 -3.87 15.16 -16.59 -0.25 -4.12 16 7 N -0.73 -1.04 5.40 -61.35 -0.33 -1.37 16 8 C 0.12 0.05 5.42 -4.04 -0.02 0.03 16 9 C 0.08 -0.03 1.74 -89.81 -0.16 -0.19 16 10 F -0.18 -0.35 16.58 2.25 0.04 -0.31 16 11 C -0.15 0.12 7.08 -25.92 -0.18 -0.06 16 12 C -0.11 0.07 3.98 -89.81 -0.36 -0.29 16 13 H 0.10 0.08 8.14 -51.93 -0.42 -0.34 16 14 C 0.09 -0.11 6.89 37.16 0.26 0.15 16 15 O -0.57 -0.25 13.66 -35.23 -0.48 -0.73 16 16 C -0.14 0.24 7.10 -25.92 -0.18 0.06 16 17 C -0.02 -0.01 9.16 -39.20 -0.36 -0.37 16 18 C -0.17 0.07 5.35 -104.67 -0.56 -0.49 16 19 C -0.06 0.06 2.79 36.00 0.10 0.16 16 20 O -0.54 0.22 12.83 -35.23 -0.45 -0.23 16 21 Si 0.68 -1.19 29.78 -169.99 -5.06 -6.25 16 22 C -0.05 0.05 8.65 -39.53 -0.34 -0.29 16 23 C -0.21 0.06 9.03 -39.48 -0.36 -0.30 16 24 H 0.06 -0.15 7.68 -51.93 -0.40 -0.55 16 25 H 0.10 -0.19 8.14 -51.93 -0.42 -0.62 16 26 H 0.06 -0.14 7.65 -51.93 -0.40 -0.53 16 27 H 0.40 -0.01 6.06 -40.82 -0.25 -0.26 16 28 H 0.09 0.00 7.84 -51.93 -0.41 -0.41 16 29 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 30 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 31 H 0.10 -0.18 7.66 -51.93 -0.40 -0.58 16 32 H 0.05 -0.12 7.85 -51.93 -0.41 -0.53 16 33 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.38 -1.43 9.12 45.56 0.42 -1.01 16 35 H 0.11 -0.35 8.06 -51.93 -0.42 -0.77 16 36 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 37 H 0.14 -0.10 6.40 -52.49 -0.34 -0.44 16 38 H 0.11 -0.08 7.96 -51.93 -0.41 -0.49 16 39 H 0.38 -1.57 8.70 45.56 0.40 -1.17 16 40 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 41 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 42 H 0.13 -0.47 4.88 -52.49 -0.26 -0.73 16 43 H 0.14 -0.37 6.30 -52.48 -0.33 -0.70 16 LS Contribution 358.56 15.07 5.40 5.40 Total: 0.00 -10.41 358.56 -8.56 -18.97 By element: Atomic # 1 Polarization: -5.83 SS G_CDS: -4.93 Total: -10.76 kcal Atomic # 6 Polarization: 2.87 SS G_CDS: -2.15 Total: 0.73 kcal Atomic # 7 Polarization: -1.04 SS G_CDS: -0.33 Total: -1.37 kcal Atomic # 8 Polarization: -4.88 SS G_CDS: -1.53 Total: -6.41 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.04 Total: -0.31 kcal Atomic # 14 Polarization: -1.19 SS G_CDS: -5.06 Total: -6.25 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -10.41 -8.56 -18.97 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12496546.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.286 kcal (2) G-P(sol) polarization free energy of solvation -10.410 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.696 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.564 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.974 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.260 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds