Wall clock time and date at job start Sun Mar 7 2021 08:57:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35660 * 116.99967 * 2 1 4 4 C 1.40135 * 120.14875 * 180.02562 * 3 2 1 5 5 C 1.47537 * 120.19433 * 359.97438 * 4 3 2 6 6 O 1.21593 * 119.99856 * 359.72988 * 5 4 3 7 7 N 1.34777 * 120.00133 * 179.45540 * 5 4 3 8 8 C 1.46504 * 119.99854 * 180.27865 * 7 5 4 9 9 C 1.53004 * 109.46928 * 179.97438 * 8 7 5 10 10 F 1.39901 * 112.84810 * 316.19231 * 9 8 7 11 11 C 1.53779 * 113.61550 * 87.49868 * 9 8 7 12 12 C 1.53778 * 87.07836 * 139.98283 * 11 9 8 13 13 H 1.09003 * 113.61974 * 89.11888 * 12 11 9 14 14 C 1.53003 * 113.69031 * 220.01069 * 12 11 9 15 15 O 1.42904 * 109.46823 * 272.53639 * 14 12 11 16 16 C 1.53778 * 113.61216 * 185.00042 * 9 8 7 17 17 C 1.39712 * 119.61620 * 179.72048 * 4 3 2 18 18 C 1.37787 * 119.90780 * 0.27321 * 17 4 3 19 19 C 1.50692 * 119.84877 * 179.97438 * 18 17 4 20 20 O 1.42901 * 109.47315 * 65.00094 * 19 18 17 21 21 Si 1.86301 * 109.47009 * 184.99971 * 19 18 17 22 22 C 1.38556 * 120.29807 * 0.02562 * 18 17 4 23 23 C 1.38045 * 120.38846 * 359.97438 * 22 18 17 24 24 H 1.08996 * 109.47169 * 59.99591 * 1 2 3 25 25 H 1.08998 * 109.46630 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.46886 * 300.00043 * 1 2 3 27 27 H 0.97000 * 119.99736 * 0.27139 * 7 5 4 28 28 H 1.08992 * 109.46803 * 299.99362 * 8 7 5 29 29 H 1.08997 * 109.47198 * 59.99605 * 8 7 5 30 30 H 1.09001 * 113.61238 * 254.52577 * 11 9 8 31 31 H 1.08995 * 113.61251 * 25.43487 * 11 9 8 32 32 H 1.08997 * 109.47105 * 32.53295 * 14 12 11 33 33 H 1.08995 * 109.47380 * 152.53436 * 14 12 11 34 34 H 0.96704 * 113.99611 * 180.02562 * 15 14 12 35 35 H 1.08998 * 113.61735 * 334.56396 * 16 9 8 36 36 H 1.08999 * 113.61540 * 105.38257 * 16 9 8 37 37 H 1.08001 * 120.04687 * 180.24786 * 17 4 3 38 38 H 1.09003 * 109.47676 * 304.99493 * 19 18 17 39 39 H 0.96695 * 113.99977 * 60.00226 * 20 19 18 40 40 H 1.48501 * 110.00009 * 58.67991 * 21 19 18 41 41 H 1.48500 * 110.00274 * 180.02562 * 21 19 18 42 42 H 1.07997 * 119.79727 * 180.02562 * 22 18 17 43 43 H 1.08003 * 119.95593 * 180.02562 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4441 1.2857 -0.0005 5 6 4.2551 0.0532 -0.0005 6 8 3.7095 -1.0334 0.0049 7 7 5.6005 0.1318 -0.0122 8 6 6.4057 -1.0922 -0.0183 9 6 7.8910 -0.7254 -0.0320 10 9 8.1873 0.3073 -0.9280 11 6 8.4869 -0.5168 1.3702 12 6 9.7404 -1.2473 0.8602 13 1 10.4779 -0.5848 0.4070 14 6 10.3524 -2.2058 1.8837 15 8 11.2728 -1.4932 2.7127 16 6 8.8244 -1.9406 -0.1621 17 6 4.0668 2.5364 -0.0065 18 6 3.3038 3.6837 -0.0060 19 6 3.9768 5.0320 -0.0118 20 8 4.6941 5.2011 -1.2362 21 14 2.6892 6.3694 0.1434 22 6 1.9206 3.6033 0.0008 23 6 1.2926 2.3740 0.0067 24 1 -0.3633 0.5139 -0.8899 25 1 -0.3632 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 6.0357 0.9987 -0.0165 28 1 6.1838 -1.6774 0.8740 29 1 6.1684 -1.6787 -0.9059 30 1 8.6624 0.5299 1.6188 31 1 7.9562 -1.0561 2.1548 32 1 9.5615 -2.6313 2.5013 33 1 10.8773 -3.0067 1.3630 34 1 11.7001 -2.0400 3.3862 35 1 8.3859 -2.8691 0.2036 36 1 9.2710 -2.0442 -1.1510 37 1 5.1447 2.6038 -0.0110 38 1 4.6698 5.0959 0.8271 39 1 4.1390 5.1560 -2.0266 40 1 1.9150 6.1861 1.3973 41 1 3.3400 7.7042 0.1383 42 1 1.3304 4.5078 0.0007 43 1 0.2139 2.3195 0.0116 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_12496546.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:27 Heat of formation + Delta-G solvation = -144.659298 kcal Electronic energy + Delta-G solvation = -28019.393532 eV Core-core repulsion = 23754.109844 eV Total energy + Delta-G solvation = -4265.283688 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.141 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -48.91789 -41.79255 -40.31662 -39.68357 -39.19897 -37.21117 -37.12076 -35.66162 -32.89473 -31.86580 -30.20586 -28.53199 -27.32690 -27.00235 -26.16545 -24.94263 -22.78003 -22.11330 -21.55723 -20.68510 -19.62750 -18.47185 -18.30521 -18.15664 -17.59730 -17.10934 -16.92448 -16.74726 -16.55150 -16.35055 -16.12759 -15.95055 -15.84564 -15.80278 -15.40596 -14.96037 -14.64245 -14.54093 -14.42094 -14.30576 -13.82831 -13.66825 -13.47823 -13.36016 -13.23008 -13.11232 -12.43770 -12.39184 -12.15116 -12.03093 -11.91237 -11.81809 -11.54354 -11.36632 -11.06132 -10.83123 -10.40207 -10.37843 -10.12274 -9.31615 -4.98583 -0.30238 0.18884 1.32710 1.65293 1.71712 1.94333 2.00390 2.24867 2.64266 3.00736 3.08277 3.12870 3.31843 3.45330 3.51237 3.56219 3.66743 3.74039 3.80174 3.96654 4.13193 4.22526 4.30737 4.33418 4.36460 4.37231 4.42413 4.51677 4.53855 4.57630 4.60289 4.67079 4.68884 4.73677 4.81927 4.87443 4.90134 4.95689 5.08009 5.21549 5.25523 5.35747 5.53736 6.24800 6.39086 6.79872 6.87374 7.08590 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.313 6.313 3 C 0.174 3.826 4 C -0.198 4.198 5 C 0.559 3.441 6 O -0.559 6.559 7 N -0.720 5.720 8 C 0.116 3.884 9 C 0.078 3.922 10 F -0.198 7.198 11 C -0.143 4.143 12 C -0.112 4.112 13 H 0.086 0.914 14 C 0.084 3.916 15 O -0.599 6.599 16 C -0.132 4.132 17 C -0.020 4.020 18 C -0.168 4.168 19 C -0.069 4.069 20 O -0.556 6.556 21 Si 0.776 3.224 22 C -0.039 4.039 23 C -0.210 4.210 24 H 0.076 0.924 25 H 0.108 0.892 26 H 0.073 0.927 27 H 0.409 0.591 28 H 0.096 0.904 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.115 0.885 32 H 0.064 0.936 33 H 0.060 0.940 34 H 0.397 0.603 35 H 0.126 0.874 36 H 0.090 0.910 37 H 0.141 0.859 38 H 0.109 0.891 39 H 0.396 0.604 40 H -0.281 1.281 41 H -0.302 1.302 42 H 0.162 0.838 43 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.008 0.288 0.109 3.024 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.224 6.224 3 C 0.125 3.875 4 C -0.202 4.202 5 C 0.348 3.652 6 O -0.439 6.439 7 N -0.374 5.374 8 C -0.008 4.008 9 C 0.060 3.940 10 F -0.179 7.179 11 C -0.180 4.180 12 C -0.131 4.131 13 H 0.104 0.896 14 C 0.006 3.994 15 O -0.407 6.407 16 C -0.170 4.170 17 C -0.039 4.039 18 C -0.169 4.169 19 C -0.179 4.179 20 O -0.364 6.364 21 Si 0.682 3.318 22 C -0.056 4.056 23 C -0.228 4.228 24 H 0.094 0.906 25 H 0.126 0.874 26 H 0.091 0.909 27 H 0.246 0.754 28 H 0.114 0.886 29 H 0.093 0.907 30 H 0.094 0.906 31 H 0.133 0.867 32 H 0.082 0.918 33 H 0.079 0.921 34 H 0.247 0.753 35 H 0.144 0.856 36 H 0.109 0.891 37 H 0.159 0.841 38 H 0.126 0.874 39 H 0.246 0.754 40 H -0.208 1.208 41 H -0.230 1.230 42 H 0.179 0.821 43 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -3.283 0.511 0.580 3.372 hybrid contribution 0.827 -0.300 0.524 1.024 sum -2.455 0.212 1.103 2.700 Atomic orbital electron populations 1.23469 0.76379 1.05555 1.02956 1.86335 1.23326 1.26264 1.86502 1.19374 0.91099 0.85712 0.91290 1.19360 0.91320 0.93738 1.15800 1.18271 0.82192 0.88856 0.75927 1.90809 1.72312 1.30058 1.50689 1.45719 1.05513 1.10499 1.75660 1.21851 0.87341 0.87447 1.04188 1.22180 0.93667 0.87892 0.90303 1.92845 1.94387 1.60775 1.69869 1.23741 0.96341 1.02932 0.95028 1.22475 0.95954 0.98203 0.96427 0.89569 1.22224 0.92132 0.93252 0.91759 1.86445 1.61176 1.42047 1.51066 1.23569 0.95065 0.97288 1.01097 1.21073 1.00406 0.89593 0.92801 1.20257 0.94028 0.95844 1.06741 1.25143 1.03533 0.99102 0.90127 1.86484 1.39030 1.95069 1.15806 0.93829 0.78877 0.73713 0.85378 1.21287 0.93417 0.98036 0.92891 1.21504 1.01914 0.90751 1.08661 0.90578 0.87388 0.90883 0.75381 0.88600 0.90713 0.90624 0.86696 0.91754 0.92142 0.75275 0.85552 0.89145 0.84126 0.87356 0.75445 1.20796 1.23027 0.82112 0.81595 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.31 -2.59 8.57 -68.84 -0.59 -3.18 16 3 C 0.17 0.97 6.70 22.84 0.15 1.12 16 4 C -0.20 -1.29 5.89 -20.01 -0.12 -1.41 16 5 C 0.56 5.63 7.76 86.70 0.67 6.30 16 6 O -0.56 -9.74 15.16 16.91 0.26 -9.48 16 7 N -0.72 -3.11 5.40 -466.26 -2.52 -5.63 16 8 C 0.12 0.22 5.42 86.38 0.47 0.69 16 9 C 0.08 0.00 1.74 -10.27 -0.02 -0.02 16 10 F -0.20 -0.99 16.58 44.97 0.75 -0.25 16 11 C -0.14 0.17 7.08 31.12 0.22 0.39 16 12 C -0.11 0.11 3.98 -10.27 -0.04 0.06 16 13 H 0.09 0.24 8.14 -2.39 -0.02 0.22 16 14 C 0.08 -0.24 6.89 71.98 0.50 0.25 16 15 O -0.60 -0.54 13.66 -148.98 -2.04 -2.57 16 16 C -0.13 0.45 7.10 31.12 0.22 0.67 16 17 C -0.02 -0.03 9.16 22.52 0.21 0.17 16 18 C -0.17 0.24 5.35 -19.90 -0.11 0.13 16 19 C -0.07 0.17 2.79 71.23 0.20 0.37 16 20 O -0.56 0.76 12.83 -148.98 -1.91 -1.16 16 21 Si 0.78 -3.47 29.78 68.60 2.04 -1.43 16 22 C -0.04 0.15 8.65 22.30 0.19 0.34 16 23 C -0.21 0.32 9.03 22.34 0.20 0.52 16 24 H 0.08 -0.43 7.68 -2.39 -0.02 -0.45 16 25 H 0.11 -0.34 8.14 -2.39 -0.02 -0.36 16 26 H 0.07 -0.38 7.65 -2.39 -0.02 -0.40 16 27 H 0.41 0.54 6.06 -92.71 -0.56 -0.02 16 28 H 0.10 0.06 7.84 -2.39 -0.02 0.05 16 29 H 0.07 0.26 8.14 -2.39 -0.02 0.24 16 30 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 31 H 0.11 -0.43 7.66 -2.39 -0.02 -0.45 16 32 H 0.06 -0.38 7.85 -2.39 -0.02 -0.40 16 33 H 0.06 -0.30 8.14 -2.39 -0.02 -0.32 16 34 H 0.40 -3.02 9.12 -74.05 -0.68 -3.70 16 35 H 0.13 -0.95 8.06 -2.39 -0.02 -0.97 16 36 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 37 H 0.14 -0.09 6.40 -2.91 -0.02 -0.11 16 38 H 0.11 -0.17 7.96 -2.39 -0.02 -0.18 16 39 H 0.40 -3.65 8.70 -74.06 -0.64 -4.29 16 40 H -0.28 0.07 7.11 99.48 0.71 0.78 16 41 H -0.30 -1.17 7.11 99.48 0.71 -0.46 16 42 H 0.16 -1.57 4.88 -2.91 -0.01 -1.58 16 43 H 0.17 -1.20 6.30 -2.91 -0.02 -1.22 16 Total: 0.00 -25.97 358.56 -0.91 -26.88 By element: Atomic # 1 Polarization: -13.12 SS G_CDS: -0.77 Total: -13.88 kcal Atomic # 6 Polarization: 6.84 SS G_CDS: 3.86 Total: 10.70 kcal Atomic # 7 Polarization: -3.11 SS G_CDS: -2.52 Total: -5.63 kcal Atomic # 8 Polarization: -12.12 SS G_CDS: -4.28 Total: -16.40 kcal Atomic # 9 Polarization: -0.99 SS G_CDS: 0.75 Total: -0.25 kcal Atomic # 14 Polarization: -3.47 SS G_CDS: 2.04 Total: -1.43 kcal Total: -25.97 -0.91 -26.88 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12496546.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.778 kcal (2) G-P(sol) polarization free energy of solvation -25.968 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -143.746 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.914 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.881 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.659 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds