Wall clock time and date at job start Sun Mar 7 2021 08:57:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86299 * 109.46996 * 2 1 4 4 C 1.50698 * 109.46997 * 119.99630 * 2 1 3 5 5 C 1.37818 * 119.94245 * 15.32801 * 4 2 1 6 6 C 1.39673 * 119.87656 * 180.29369 * 5 4 2 7 7 C 1.47723 * 120.11149 * 179.67489 * 6 5 4 8 8 O 1.21568 * 120.00507 * 359.72489 * 7 6 5 9 9 N 1.34783 * 119.99732 * 179.72953 * 7 6 5 10 10 C 1.46500 * 120.00119 * 180.02562 * 9 7 6 11 11 C 1.52995 * 109.47108 * 179.97438 * 10 9 7 12 12 F 1.39905 * 112.85050 * 314.66470 * 11 10 9 13 13 C 1.53781 * 113.69312 * 85.93318 * 11 10 9 14 14 C 1.53779 * 87.08092 * 139.99220 * 13 11 10 15 15 H 1.08996 * 113.69319 * 89.12941 * 14 13 11 16 16 C 1.53007 * 113.61310 * 220.02292 * 14 13 11 17 17 O 1.42904 * 109.46734 * 272.49735 * 16 14 13 18 18 C 1.53777 * 87.08235 * 334.56833 * 14 13 11 19 19 C 1.39626 * 119.76314 * 359.40213 * 6 5 4 20 20 C 1.37856 * 119.88497 * 0.27452 * 19 6 5 21 21 C 1.38636 * 120.11532 * 0.02562 * 20 19 6 22 22 F 1.35101 * 119.87678 * 179.97438 * 21 20 19 23 23 H 0.96701 * 114.00069 * 300.00020 * 1 2 3 24 24 H 1.08997 * 109.47143 * 239.99845 * 2 1 3 25 25 H 1.48505 * 109.99976 * 299.99854 * 3 2 1 26 26 H 1.48496 * 110.00243 * 61.31764 * 3 2 1 27 27 H 1.08005 * 120.06036 * 359.97438 * 5 4 2 28 28 H 0.96997 * 119.99419 * 359.97438 * 9 7 6 29 29 H 1.09005 * 109.46936 * 59.99437 * 10 9 7 30 30 H 1.09004 * 109.46937 * 300.00111 * 10 9 7 31 31 H 1.08997 * 113.61414 * 254.54602 * 13 11 10 32 32 H 1.09005 * 113.60855 * 25.44101 * 13 11 10 33 33 H 1.08995 * 109.47003 * 32.49400 * 16 14 13 34 34 H 1.08995 * 109.47164 * 152.50012 * 16 14 13 35 35 H 0.96702 * 113.99816 * 180.02562 * 17 16 14 36 36 H 1.09009 * 113.61922 * 270.88620 * 18 14 13 37 37 H 1.09000 * 113.69557 * 139.99050 * 18 14 13 38 38 H 1.08006 * 120.05972 * 180.25132 * 19 6 5 39 39 H 1.08000 * 119.94217 * 179.97438 * 20 19 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.0747 -1.4999 1.9668 6 6 1.5402 -2.1527 3.1105 7 6 0.6247 -2.9945 3.9077 8 8 -0.5372 -3.1161 3.5715 9 7 1.0776 -3.6278 5.0079 10 6 0.1699 -4.4632 5.7981 11 6 0.9299 -5.0622 6.9832 12 9 2.1786 -5.5796 6.6223 13 6 0.9767 -4.1434 8.2154 14 6 0.7594 -5.4053 9.0669 15 1 1.6848 -5.9031 9.3563 16 6 -0.1946 -5.1935 10.2443 17 8 0.5419 -4.7240 11.3754 18 6 0.0855 -6.0269 7.8324 19 6 2.8752 -2.0113 3.4944 20 6 3.7252 -1.2245 2.7469 21 6 3.2564 -0.5737 1.6161 22 9 4.0935 0.1966 0.8873 23 1 -0.3933 0.4417 0.7651 24 1 1.7924 -0.5138 -0.8899 25 1 1.5615 2.4679 -1.2085 26 1 1.5879 2.4586 1.2242 27 1 0.0441 -1.6095 1.6629 28 1 2.0048 -3.5311 5.2759 29 1 -0.2206 -5.2667 5.1737 30 1 -0.6563 -3.8546 6.1659 31 1 1.9470 -3.6724 8.3723 32 1 0.1489 -3.4358 8.2641 33 1 -0.9503 -4.4569 9.9716 34 1 -0.6799 -6.1372 10.4930 35 1 -0.0005 -4.5680 12.1607 36 1 -0.9860 -5.8344 7.7763 37 1 0.3354 -7.0767 7.6789 38 1 3.2412 -2.5172 4.3757 39 1 4.7578 -1.1141 3.0432 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_12496548.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:30 Heat of formation + Delta-G solvation = -153.245745 kcal Electronic energy + Delta-G solvation = -25785.257444 eV Core-core repulsion = 21524.367255 eV Total energy + Delta-G solvation = -4260.890189 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.116 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -50.38144 -48.94575 -41.42602 -40.15166 -39.59037 -37.80367 -37.31595 -35.75497 -32.97966 -32.15631 -30.28839 -27.64956 -27.22581 -26.93172 -24.72063 -23.34479 -22.38317 -21.60271 -20.81411 -19.51641 -18.70058 -18.43282 -18.25277 -17.84252 -17.29550 -17.12966 -16.96953 -16.67105 -16.47789 -16.13743 -16.05374 -15.82978 -15.64530 -15.23702 -15.11975 -14.83029 -14.44719 -14.37157 -14.19505 -13.92574 -13.87703 -13.65338 -13.40679 -13.28953 -12.83208 -12.52484 -12.42492 -12.04844 -11.91048 -11.66963 -11.49136 -11.19769 -11.02271 -10.96159 -10.34747 -10.11811 -9.81509 -4.78359 -0.56795 -0.07684 1.18958 1.57251 1.62011 1.83281 1.96259 2.52881 2.83560 2.86101 2.93799 2.98800 3.11213 3.17525 3.26618 3.34511 3.50565 3.56946 3.62571 3.82884 4.02721 4.08092 4.16236 4.28321 4.34920 4.36242 4.37688 4.42284 4.49154 4.51843 4.66138 4.68947 4.73939 4.77238 4.79252 4.94227 4.98847 5.11551 5.22768 5.50272 6.25240 6.28555 6.55232 7.01611 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.074 4.074 3 Si 0.677 3.323 4 C -0.155 4.155 5 C -0.023 4.023 6 C -0.142 4.142 7 C 0.563 3.437 8 O -0.529 6.529 9 N -0.724 5.724 10 C 0.114 3.886 11 C 0.079 3.921 12 F -0.184 7.184 13 C -0.146 4.146 14 C -0.108 4.108 15 H 0.105 0.895 16 C 0.085 3.915 17 O -0.573 6.573 18 C -0.142 4.142 19 C -0.060 4.060 20 C -0.149 4.149 21 C 0.124 3.876 22 F -0.104 7.104 23 H 0.378 0.622 24 H 0.128 0.872 25 H -0.249 1.249 26 H -0.256 1.256 27 H 0.154 0.846 28 H 0.404 0.596 29 H 0.084 0.916 30 H 0.092 0.908 31 H 0.085 0.915 32 H 0.102 0.898 33 H 0.050 0.950 34 H 0.051 0.949 35 H 0.382 0.618 36 H 0.106 0.894 37 H 0.090 0.910 38 H 0.138 0.862 39 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.771 -0.418 4.372 4.736 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.183 4.183 3 Si 0.576 3.424 4 C -0.156 4.156 5 C -0.042 4.042 6 C -0.145 4.145 7 C 0.350 3.650 8 O -0.406 6.406 9 N -0.377 5.377 10 C -0.011 4.011 11 C 0.061 3.939 12 F -0.164 7.164 13 C -0.184 4.184 14 C -0.127 4.127 15 H 0.124 0.876 16 C 0.007 3.993 17 O -0.379 6.379 18 C -0.180 4.180 19 C -0.078 4.078 20 C -0.167 4.167 21 C 0.104 3.896 22 F -0.082 7.082 23 H 0.226 0.774 24 H 0.145 0.855 25 H -0.173 1.173 26 H -0.180 1.180 27 H 0.172 0.828 28 H 0.241 0.759 29 H 0.102 0.898 30 H 0.110 0.890 31 H 0.104 0.896 32 H 0.121 0.879 33 H 0.068 0.932 34 H 0.069 0.931 35 H 0.230 0.770 36 H 0.124 0.876 37 H 0.109 0.891 38 H 0.156 0.844 39 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 1.347 -0.030 3.129 3.407 hybrid contribution -0.747 -0.215 0.956 1.232 sum 0.600 -0.245 4.084 4.136 Atomic orbital electron populations 1.86611 1.17043 1.80114 1.49512 1.24946 0.84562 1.11217 0.97548 0.94737 0.92753 0.73516 0.81429 1.20387 0.92955 1.02053 1.00223 1.20971 1.00962 0.91117 0.91132 1.19925 0.94268 1.02193 0.98100 1.18111 0.87371 0.79339 0.80158 1.90827 1.17665 1.62733 1.69367 1.45720 1.14660 1.49819 1.27502 1.21844 0.92668 0.95051 0.91492 1.22086 0.81399 0.96584 0.93868 1.92879 1.42696 1.87885 1.92939 1.23728 1.04681 0.97026 0.92932 1.22509 1.00259 0.97137 0.92763 0.87642 1.22143 0.93058 0.98018 0.86044 1.86487 1.39257 1.89062 1.23101 1.23559 1.00605 1.00203 0.93653 1.21199 0.91841 0.96053 0.98734 1.21096 1.01890 0.99017 0.94716 1.17654 0.87243 0.93172 0.91513 1.91197 1.69772 1.71269 1.75990 0.77401 0.85452 1.17321 1.18003 0.82831 0.75944 0.89777 0.88996 0.89612 0.87912 0.93206 0.93112 0.77028 0.87558 0.89095 0.84389 0.83203 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.74 11.64 -35.23 -0.41 -1.15 16 2 C -0.07 -0.02 2.96 36.00 0.11 0.09 16 3 Si 0.68 0.11 29.57 -169.99 -5.03 -4.92 16 4 C -0.15 -0.04 5.13 -104.61 -0.54 -0.57 16 5 C -0.02 -0.02 8.78 -39.20 -0.34 -0.37 16 6 C -0.14 -0.06 5.87 -104.97 -0.62 -0.68 16 7 C 0.56 1.01 7.77 -12.38 -0.10 0.91 16 8 O -0.53 -2.83 16.34 5.31 0.09 -2.75 16 9 N -0.72 0.52 5.40 -61.29 -0.33 0.19 16 10 C 0.11 -0.14 5.41 -4.04 -0.02 -0.16 16 11 C 0.08 -0.15 1.72 -89.81 -0.15 -0.30 16 12 F -0.18 -0.06 16.64 2.25 0.04 -0.02 16 13 C -0.15 0.33 7.08 -25.92 -0.18 0.14 16 14 C -0.11 0.19 3.99 -89.81 -0.36 -0.17 16 15 H 0.11 -0.03 8.14 -51.93 -0.42 -0.46 16 16 C 0.09 -0.18 6.88 37.16 0.26 0.08 16 17 O -0.57 0.21 13.66 -35.23 -0.48 -0.27 16 18 C -0.14 0.40 7.10 -25.92 -0.18 0.22 16 19 C -0.06 0.11 9.54 -39.20 -0.37 -0.26 16 20 C -0.15 0.30 10.01 -39.57 -0.40 -0.10 16 21 C 0.12 -0.08 6.67 -39.27 -0.26 -0.34 16 22 F -0.10 0.12 13.70 2.25 0.03 0.15 16 23 H 0.38 -0.54 8.44 45.56 0.38 -0.15 16 24 H 0.13 -0.06 7.96 -51.93 -0.41 -0.47 16 25 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 26 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 27 H 0.15 0.27 6.67 -52.48 -0.35 -0.08 16 28 H 0.40 -1.04 6.10 -40.82 -0.25 -1.29 16 29 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.09 -0.16 7.88 -51.93 -0.41 -0.57 16 31 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 32 H 0.10 -0.32 7.68 -51.93 -0.40 -0.72 16 33 H 0.05 -0.16 7.84 -51.93 -0.41 -0.57 16 34 H 0.05 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.38 -1.70 9.12 45.56 0.42 -1.29 16 36 H 0.11 -0.46 8.06 -51.92 -0.42 -0.88 16 37 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 38 H 0.14 -0.62 6.40 -52.48 -0.34 -0.96 16 39 H 0.15 -0.63 8.06 -52.49 -0.42 -1.06 16 LS Contribution 335.00 15.07 5.05 5.05 Total: 0.00 -8.38 335.00 -8.13 -16.50 By element: Atomic # 1 Polarization: -7.35 SS G_CDS: -3.92 Total: -11.26 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -3.16 Total: -1.52 kcal Atomic # 7 Polarization: 0.52 SS G_CDS: -0.33 Total: 0.19 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -0.80 Total: -4.17 kcal Atomic # 9 Polarization: 0.06 SS G_CDS: 0.07 Total: 0.13 kcal Atomic # 14 Polarization: 0.11 SS G_CDS: -5.03 Total: -4.92 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -8.38 -8.13 -16.50 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12496548.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.743 kcal (2) G-P(sol) polarization free energy of solvation -8.377 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.120 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.126 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.503 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.246 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds