Wall clock time and date at job start Sun Mar 7 2021 08:57:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86299 * 109.46996 * 2 1 4 4 C 1.50698 * 109.46997 * 119.99630 * 2 1 3 5 5 C 1.37818 * 119.94245 * 15.32801 * 4 2 1 6 6 C 1.39673 * 119.87656 * 180.29369 * 5 4 2 7 7 C 1.47723 * 120.11149 * 179.67489 * 6 5 4 8 8 O 1.21568 * 120.00507 * 359.72489 * 7 6 5 9 9 N 1.34783 * 119.99732 * 179.72953 * 7 6 5 10 10 C 1.46500 * 120.00119 * 180.02562 * 9 7 6 11 11 C 1.52995 * 109.47108 * 179.97438 * 10 9 7 12 12 F 1.39905 * 112.85050 * 314.66470 * 11 10 9 13 13 C 1.53781 * 113.69312 * 85.93318 * 11 10 9 14 14 C 1.53779 * 87.08092 * 139.99220 * 13 11 10 15 15 H 1.08996 * 113.69319 * 89.12941 * 14 13 11 16 16 C 1.53007 * 113.61310 * 220.02292 * 14 13 11 17 17 O 1.42904 * 109.46734 * 272.49735 * 16 14 13 18 18 C 1.53777 * 87.08235 * 334.56833 * 14 13 11 19 19 C 1.39626 * 119.76314 * 359.40213 * 6 5 4 20 20 C 1.37856 * 119.88497 * 0.27452 * 19 6 5 21 21 C 1.38636 * 120.11532 * 0.02562 * 20 19 6 22 22 F 1.35101 * 119.87678 * 179.97438 * 21 20 19 23 23 H 0.96701 * 114.00069 * 300.00020 * 1 2 3 24 24 H 1.08997 * 109.47143 * 239.99845 * 2 1 3 25 25 H 1.48505 * 109.99976 * 299.99854 * 3 2 1 26 26 H 1.48496 * 110.00243 * 61.31764 * 3 2 1 27 27 H 1.08005 * 120.06036 * 359.97438 * 5 4 2 28 28 H 0.96997 * 119.99419 * 359.97438 * 9 7 6 29 29 H 1.09005 * 109.46936 * 59.99437 * 10 9 7 30 30 H 1.09004 * 109.46937 * 300.00111 * 10 9 7 31 31 H 1.08997 * 113.61414 * 254.54602 * 13 11 10 32 32 H 1.09005 * 113.60855 * 25.44101 * 13 11 10 33 33 H 1.08995 * 109.47003 * 32.49400 * 16 14 13 34 34 H 1.08995 * 109.47164 * 152.50012 * 16 14 13 35 35 H 0.96702 * 113.99816 * 180.02562 * 17 16 14 36 36 H 1.09009 * 113.61922 * 270.88620 * 18 14 13 37 37 H 1.09000 * 113.69557 * 139.99050 * 18 14 13 38 38 H 1.08006 * 120.05972 * 180.25132 * 19 6 5 39 39 H 1.08000 * 119.94217 * 179.97438 * 20 19 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.0747 -1.4999 1.9668 6 6 1.5402 -2.1527 3.1105 7 6 0.6247 -2.9945 3.9077 8 8 -0.5372 -3.1161 3.5715 9 7 1.0776 -3.6278 5.0079 10 6 0.1699 -4.4632 5.7981 11 6 0.9299 -5.0622 6.9832 12 9 2.1786 -5.5796 6.6223 13 6 0.9767 -4.1434 8.2154 14 6 0.7594 -5.4053 9.0669 15 1 1.6848 -5.9031 9.3563 16 6 -0.1946 -5.1935 10.2443 17 8 0.5419 -4.7240 11.3754 18 6 0.0855 -6.0269 7.8324 19 6 2.8752 -2.0113 3.4944 20 6 3.7252 -1.2245 2.7469 21 6 3.2564 -0.5737 1.6161 22 9 4.0935 0.1966 0.8873 23 1 -0.3933 0.4417 0.7651 24 1 1.7924 -0.5138 -0.8899 25 1 1.5615 2.4679 -1.2085 26 1 1.5879 2.4586 1.2242 27 1 0.0441 -1.6095 1.6629 28 1 2.0048 -3.5311 5.2759 29 1 -0.2206 -5.2667 5.1737 30 1 -0.6563 -3.8546 6.1659 31 1 1.9470 -3.6724 8.3723 32 1 0.1489 -3.4358 8.2641 33 1 -0.9503 -4.4569 9.9716 34 1 -0.6799 -6.1372 10.4930 35 1 -0.0005 -4.5680 12.1607 36 1 -0.9860 -5.8344 7.7763 37 1 0.3354 -7.0767 7.6789 38 1 3.2412 -2.5172 4.3757 39 1 4.7578 -1.1141 3.0432 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_12496548.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:30 Heat of formation + Delta-G solvation = -154.820137 kcal Electronic energy + Delta-G solvation = -25785.325715 eV Core-core repulsion = 21524.367255 eV Total energy + Delta-G solvation = -4260.958460 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.116 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -50.29461 -48.89136 -41.45691 -40.04250 -39.58062 -37.83953 -37.20211 -35.79708 -32.94668 -32.10517 -30.19601 -27.56577 -27.05296 -26.85503 -24.68560 -23.28950 -22.26717 -21.61983 -20.66982 -19.49433 -18.64133 -18.32118 -18.21235 -17.85537 -17.19707 -17.09121 -16.90318 -16.61949 -16.40641 -16.13276 -16.06565 -15.81779 -15.57165 -15.16461 -15.00457 -14.79297 -14.39312 -14.31468 -14.23722 -13.94139 -13.82001 -13.44933 -13.33993 -13.19536 -12.87007 -12.48556 -12.38252 -11.98428 -11.90025 -11.57980 -11.34750 -11.25305 -11.02696 -10.81702 -10.38909 -10.06428 -9.77239 -4.84441 -0.53531 -0.00673 1.15715 1.49797 1.56169 1.83179 1.89433 2.54386 2.93039 3.02339 3.10442 3.10749 3.17148 3.30326 3.33885 3.50010 3.59725 3.65132 3.82018 3.95700 4.09023 4.23527 4.35101 4.40193 4.43565 4.50596 4.59206 4.60535 4.63422 4.71220 4.77929 4.83737 4.86897 4.89934 4.97624 4.99134 5.05365 5.16093 5.37477 5.59054 6.27639 6.32771 6.88295 6.97058 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.079 4.079 3 Si 0.745 3.255 4 C -0.162 4.162 5 C -0.037 4.037 6 C -0.154 4.154 7 C 0.561 3.439 8 O -0.574 6.574 9 N -0.712 5.712 10 C 0.113 3.887 11 C 0.080 3.920 12 F -0.197 7.197 13 C -0.141 4.141 14 C -0.114 4.114 15 H 0.087 0.913 16 C 0.083 3.917 17 O -0.598 6.598 18 C -0.135 4.135 19 C -0.049 4.049 20 C -0.142 4.142 21 C 0.121 3.879 22 F -0.099 7.099 23 H 0.387 0.613 24 H 0.134 0.866 25 H -0.289 1.289 26 H -0.284 1.284 27 H 0.138 0.862 28 H 0.414 0.586 29 H 0.076 0.924 30 H 0.099 0.901 31 H 0.080 0.920 32 H 0.115 0.885 33 H 0.064 0.936 34 H 0.058 0.942 35 H 0.397 0.603 36 H 0.125 0.875 37 H 0.088 0.912 38 H 0.167 0.833 39 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.805 -0.573 5.299 6.023 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.188 4.188 3 Si 0.648 3.352 4 C -0.164 4.164 5 C -0.056 4.056 6 C -0.158 4.158 7 C 0.349 3.651 8 O -0.454 6.454 9 N -0.365 5.365 10 C -0.011 4.011 11 C 0.062 3.938 12 F -0.177 7.177 13 C -0.179 4.179 14 C -0.132 4.132 15 H 0.105 0.895 16 C 0.005 3.995 17 O -0.407 6.407 18 C -0.173 4.173 19 C -0.067 4.067 20 C -0.160 4.160 21 C 0.101 3.899 22 F -0.078 7.078 23 H 0.237 0.763 24 H 0.151 0.849 25 H -0.217 1.217 26 H -0.210 1.210 27 H 0.155 0.845 28 H 0.252 0.748 29 H 0.094 0.906 30 H 0.117 0.883 31 H 0.099 0.901 32 H 0.133 0.867 33 H 0.082 0.918 34 H 0.076 0.924 35 H 0.247 0.753 36 H 0.143 0.857 37 H 0.107 0.893 38 H 0.184 0.816 39 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges 2.413 -0.205 4.094 4.757 hybrid contribution -1.072 -0.152 0.696 1.287 sum 1.341 -0.357 4.791 4.988 Atomic orbital electron populations 1.86573 1.17880 1.80460 1.50328 1.25070 0.84017 1.11519 0.98155 0.94077 0.91610 0.71885 0.77579 1.20327 0.93527 1.02362 1.00148 1.20882 1.00536 0.92152 0.91989 1.19921 0.95221 1.02561 0.98066 1.18356 0.86965 0.79258 0.80472 1.90800 1.19511 1.64471 1.70625 1.45667 1.15247 1.48895 1.26667 1.21901 0.92916 0.94851 0.91452 1.22139 0.80907 0.97120 0.93656 1.92852 1.43653 1.88132 1.93074 1.23737 1.04902 0.96967 0.92268 1.22483 0.99839 0.97422 0.93457 0.89509 1.22235 0.92993 0.98807 0.85436 1.86440 1.40752 1.89244 1.24286 1.23581 1.01461 0.99810 0.92464 1.21489 0.90566 0.95401 0.99274 1.21440 1.03152 0.97757 0.93643 1.17785 0.86851 0.93263 0.91979 1.91202 1.69458 1.71123 1.75992 0.76317 0.84857 1.21693 1.20994 0.84471 0.74752 0.90608 0.88286 0.90134 0.86683 0.91762 0.92400 0.75296 0.85692 0.89294 0.81561 0.80302 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.38 11.64 -148.98 -1.73 -4.11 16 2 C -0.08 -0.11 2.96 71.24 0.21 0.10 16 3 Si 0.75 0.81 29.57 68.60 2.03 2.84 16 4 C -0.16 -0.14 5.13 -19.86 -0.10 -0.25 16 5 C -0.04 -0.12 8.78 22.52 0.20 0.08 16 6 C -0.15 -0.16 5.87 -20.09 -0.12 -0.28 16 7 C 0.56 2.39 7.77 86.75 0.67 3.07 16 8 O -0.57 -7.13 16.34 -3.93 -0.06 -7.19 16 9 N -0.71 1.15 5.40 -466.08 -2.52 -1.37 16 10 C 0.11 -0.29 5.41 86.38 0.47 0.18 16 11 C 0.08 -0.32 1.72 -10.27 -0.02 -0.34 16 12 F -0.20 -0.09 16.64 44.97 0.75 0.66 16 13 C -0.14 0.71 7.08 31.12 0.22 0.93 16 14 C -0.11 0.42 3.99 -10.27 -0.04 0.38 16 15 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 16 C 0.08 -0.40 6.88 71.98 0.50 0.09 16 17 O -0.60 0.59 13.66 -148.98 -2.04 -1.45 16 18 C -0.14 0.83 7.10 31.12 0.22 1.05 16 19 C -0.05 0.26 9.54 22.51 0.21 0.48 16 20 C -0.14 0.85 10.01 22.27 0.22 1.07 16 21 C 0.12 -0.27 6.67 22.47 0.15 -0.12 16 22 F -0.10 0.34 13.70 44.97 0.62 0.96 16 23 H 0.39 -0.38 8.44 -74.06 -0.63 -1.00 16 24 H 0.13 -0.04 7.96 -2.39 -0.02 -0.06 16 25 H -0.29 -2.22 7.11 99.48 0.71 -1.52 16 26 H -0.28 -1.58 7.11 99.48 0.71 -0.87 16 27 H 0.14 0.83 6.67 -2.91 -0.02 0.82 16 28 H 0.41 -2.53 6.10 -92.71 -0.57 -3.10 16 29 H 0.08 -0.04 8.14 -2.38 -0.02 -0.06 16 30 H 0.10 -0.37 7.88 -2.39 -0.02 -0.38 16 31 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 32 H 0.11 -0.86 7.68 -2.38 -0.02 -0.87 16 33 H 0.06 -0.50 7.84 -2.39 -0.02 -0.52 16 34 H 0.06 -0.38 8.14 -2.39 -0.02 -0.40 16 35 H 0.40 -3.65 9.12 -74.06 -0.68 -4.32 16 36 H 0.12 -1.24 8.06 -2.38 -0.02 -1.26 16 37 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 38 H 0.17 -1.93 6.40 -2.91 -0.02 -1.95 16 39 H 0.18 -2.11 8.06 -2.91 -0.02 -2.14 16 Total: 0.00 -20.83 335.00 -0.87 -21.69 By element: Atomic # 1 Polarization: -17.76 SS G_CDS: -0.71 Total: -18.46 kcal Atomic # 6 Polarization: 3.64 SS G_CDS: 2.80 Total: 6.44 kcal Atomic # 7 Polarization: 1.15 SS G_CDS: -2.52 Total: -1.37 kcal Atomic # 8 Polarization: -8.92 SS G_CDS: -3.83 Total: -12.75 kcal Atomic # 9 Polarization: 0.25 SS G_CDS: 1.36 Total: 1.61 kcal Atomic # 14 Polarization: 0.81 SS G_CDS: 2.03 Total: 2.84 kcal Total: -20.83 -0.87 -21.69 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12496548.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -133.126 kcal (2) G-P(sol) polarization free energy of solvation -20.826 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -153.952 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.868 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.694 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.820 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds