Wall clock time and date at job start Sun Mar 7 2021 08:57:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86306 * 109.46786 * 2 1 4 4 C 1.50705 * 109.46920 * 119.99286 * 2 1 3 5 5 C 1.35078 * 126.07762 * 255.27055 * 4 2 1 6 6 N 1.35041 * 107.97812 * 180.20114 * 5 4 2 7 7 C 1.46506 * 125.93228 * 179.84043 * 6 5 4 8 8 C 1.50695 * 109.47276 * 124.71280 * 7 6 5 9 9 O 1.21280 * 119.99964 * 0.02562 * 8 7 6 10 10 N 1.34775 * 120.00067 * 179.97438 * 8 7 6 11 11 C 1.46497 * 120.00100 * 179.97438 * 10 8 7 12 12 C 1.53006 * 109.47162 * 179.97438 * 11 10 8 13 13 F 1.39902 * 112.84809 * 48.80774 * 12 11 10 14 14 C 1.53783 * 113.61298 * 179.97438 * 12 11 10 15 15 C 1.53784 * 87.07757 * 139.98515 * 14 12 11 16 16 H 1.08994 * 113.61649 * 89.11582 * 15 14 12 17 17 C 1.52998 * 113.61350 * 219.93487 * 15 14 12 18 18 O 1.42893 * 109.47243 * 185.00137 * 17 15 14 19 19 C 1.53771 * 113.61669 * 277.50022 * 12 11 10 20 20 N 1.40072 * 108.13785 * 359.57093 * 6 5 4 21 21 C 1.31619 * 108.10718 * 0.27044 * 20 6 5 22 22 C 1.48423 * 126.03538 * 179.97438 * 21 20 6 23 23 C 1.39315 * 120.11802 * 144.74790 * 22 21 20 24 24 C 1.38030 * 119.87717 * 179.71861 * 23 22 21 25 25 C 1.38313 * 120.11855 * 0.55336 * 24 23 22 26 26 C 1.38319 * 120.24200 * 359.72022 * 25 24 23 27 27 C 1.38028 * 120.11785 * 0.02562 * 26 25 24 28 28 H 0.96706 * 114.00042 * 60.00797 * 1 2 3 29 29 H 1.08998 * 109.47773 * 239.99623 * 2 1 3 30 30 H 1.48497 * 110.00066 * 59.99468 * 3 2 1 31 31 H 1.48503 * 109.99653 * 181.31704 * 3 2 1 32 32 H 1.07998 * 126.01745 * 0.06763 * 5 4 2 33 33 H 1.08997 * 109.47120 * 244.71754 * 7 6 5 34 34 H 1.08998 * 109.46787 * 4.71270 * 7 6 5 35 35 H 0.97005 * 119.99845 * 0.02562 * 10 8 7 36 36 H 1.09002 * 109.47066 * 300.00101 * 11 10 8 37 37 H 1.08998 * 109.47179 * 60.00369 * 11 10 8 38 38 H 1.08997 * 113.61217 * 254.53190 * 14 12 11 39 39 H 1.08995 * 113.61634 * 25.35530 * 14 12 11 40 40 H 1.09005 * 109.47360 * 305.00261 * 17 15 14 41 41 H 1.09000 * 109.47199 * 64.99907 * 17 15 14 42 42 H 0.96707 * 114.00255 * 180.02562 * 18 17 15 43 43 H 1.09005 * 113.61305 * 334.56638 * 19 12 11 44 44 H 1.09002 * 113.61779 * 105.46498 * 19 12 11 45 45 H 1.08004 * 120.06590 * 359.97186 * 23 22 21 46 46 H 1.08001 * 119.94215 * 180.27279 * 24 23 22 47 47 H 1.08004 * 119.88001 * 179.74047 * 25 24 23 48 48 H 1.08001 * 119.94093 * 180.02562 * 26 25 24 49 49 H 1.08003 * 120.05748 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.4581 -0.1245 2.3278 6 7 2.7895 -1.0989 3.2021 7 6 3.3954 -0.9008 4.5212 8 6 2.5425 -1.5656 5.5707 9 8 1.5286 -2.1480 5.2486 10 7 2.9070 -1.5139 6.8672 11 6 2.0776 -2.1597 7.8876 12 6 2.7112 -1.9540 9.2650 13 9 3.0656 -0.6223 9.5066 14 6 1.9135 -2.5965 10.4121 15 6 3.2659 -3.0125 11.0145 16 1 3.6954 -2.2649 11.6814 17 6 3.2605 -4.4169 11.6214 18 8 4.5166 -4.6669 12.2549 19 6 3.8304 -2.9589 9.5846 20 7 2.4476 -2.3315 2.6314 21 6 1.9300 -2.1026 1.4430 22 6 1.4333 -3.1303 0.4943 23 6 0.3271 -2.8633 -0.3094 24 6 -0.1271 -3.8205 -1.1941 25 6 0.5069 -5.0471 -1.2754 26 6 1.6021 -5.3195 -0.4757 27 6 2.0678 -4.3677 0.4087 28 1 -0.3933 0.4416 -0.7652 29 1 1.7924 -0.5139 -0.8899 30 1 1.5612 2.4680 1.2084 31 1 3.5345 1.7704 -0.0321 32 1 2.5928 0.9364 2.4785 33 1 4.3931 -1.3395 4.5323 34 1 3.4654 0.1663 4.7323 35 1 3.7181 -1.0484 7.1248 36 1 1.0802 -1.7201 7.8767 37 1 2.0068 -3.2267 7.6764 38 1 1.3674 -1.8761 11.0211 39 1 1.2968 -3.4382 10.0972 40 1 2.4607 -4.4912 12.3583 41 1 3.0980 -5.1525 10.8336 42 1 4.5847 -5.5414 12.6622 43 1 3.7390 -3.9008 9.0436 44 1 4.8312 -2.5312 9.5257 45 1 -0.1716 -1.9076 -0.2433 46 1 -0.9818 -3.6129 -1.8209 47 1 0.1457 -5.7947 -1.9660 48 1 2.0937 -6.2788 -0.5434 49 1 2.9233 -4.5813 1.0324 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_12622748.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:34 Heat of formation + Delta-G solvation = -19.278841 kcal Electronic energy + Delta-G solvation = -33687.365473 eV Core-core repulsion = 28919.595400 eV Total energy + Delta-G solvation = -4767.770073 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.163 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -48.95054 -42.44143 -40.78188 -39.93000 -39.56817 -37.71331 -37.32390 -35.69869 -34.78792 -32.37368 -31.80204 -31.41138 -30.53674 -28.79170 -27.31343 -27.00870 -25.73700 -23.99659 -23.30047 -22.40595 -21.92215 -21.45831 -20.88852 -20.65600 -18.72063 -18.47496 -18.38269 -18.30619 -17.67556 -17.24802 -17.06218 -16.75906 -16.54995 -16.35978 -16.12641 -15.85194 -15.71128 -15.55982 -15.25187 -15.11479 -15.00837 -14.78862 -14.56134 -14.37338 -14.21682 -14.04207 -13.88600 -13.71610 -13.67810 -13.48722 -13.36854 -13.21286 -12.70482 -12.53361 -12.14465 -12.05267 -11.99123 -11.77409 -11.67414 -11.49732 -11.44332 -11.22020 -11.00161 -10.57415 -10.32405 -10.17549 -9.68335 -9.62985 -9.16011 -5.00791 0.26751 0.69807 0.77375 1.21324 1.32914 1.40700 1.62883 1.87247 1.89034 1.97061 2.82884 2.92760 2.97818 3.07767 3.16244 3.27944 3.34200 3.48559 3.56942 3.61275 3.63212 3.78758 3.81233 4.07358 4.11254 4.16075 4.20314 4.26628 4.28049 4.35745 4.37132 4.38071 4.45450 4.48260 4.48957 4.63475 4.65838 4.73710 4.78067 4.79019 4.87667 4.93074 5.08922 5.16665 5.21642 5.36466 5.45047 5.76168 5.78319 5.81999 5.85901 6.20015 6.24763 6.55303 6.68067 6.71950 6.98755 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.031 4.031 3 Si 0.685 3.315 4 C -0.205 4.205 5 C 0.060 3.940 6 N -0.358 5.358 7 C 0.117 3.883 8 C 0.500 3.500 9 O -0.501 6.501 10 N -0.727 5.727 11 C 0.116 3.884 12 C 0.080 3.920 13 F -0.184 7.184 14 C -0.142 4.142 15 C -0.108 4.108 16 H 0.105 0.895 17 C 0.085 3.915 18 O -0.573 6.573 19 C -0.146 4.146 20 N -0.248 5.248 21 C 0.136 3.864 22 C -0.020 4.020 23 C -0.100 4.100 24 C -0.125 4.125 25 C -0.112 4.112 26 C -0.127 4.127 27 C -0.092 4.092 28 H 0.380 0.620 29 H 0.074 0.926 30 H -0.254 1.254 31 H -0.256 1.256 32 H 0.172 0.828 33 H 0.120 0.880 34 H 0.128 0.872 35 H 0.405 0.595 36 H 0.082 0.918 37 H 0.091 0.909 38 H 0.090 0.910 39 H 0.106 0.894 40 H 0.051 0.949 41 H 0.050 0.950 42 H 0.382 0.618 43 H 0.102 0.898 44 H 0.085 0.915 45 H 0.155 0.845 46 H 0.126 0.874 47 H 0.122 0.878 48 H 0.124 0.876 49 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.444 1.646 -0.649 2.284 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.143 4.143 3 Si 0.586 3.414 4 C -0.216 4.216 5 C -0.084 4.084 6 N -0.140 5.140 7 C -0.008 4.008 8 C 0.284 3.716 9 O -0.373 6.373 10 N -0.382 5.382 11 C -0.008 4.008 12 C 0.061 3.939 13 F -0.164 7.164 14 C -0.180 4.180 15 C -0.126 4.126 16 H 0.123 0.877 17 C 0.007 3.993 18 O -0.379 6.379 19 C -0.183 4.183 20 N -0.069 5.069 21 C -0.030 4.030 22 C -0.022 4.022 23 C -0.119 4.119 24 C -0.143 4.143 25 C -0.130 4.130 26 C -0.145 4.145 27 C -0.111 4.111 28 H 0.228 0.772 29 H 0.092 0.908 30 H -0.179 1.179 31 H -0.181 1.181 32 H 0.189 0.811 33 H 0.138 0.862 34 H 0.146 0.854 35 H 0.240 0.760 36 H 0.100 0.900 37 H 0.109 0.891 38 H 0.109 0.891 39 H 0.124 0.876 40 H 0.069 0.931 41 H 0.068 0.932 42 H 0.230 0.770 43 H 0.121 0.879 44 H 0.104 0.896 45 H 0.173 0.827 46 H 0.143 0.857 47 H 0.140 0.860 48 H 0.142 0.858 49 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 1.811 1.316 0.930 2.424 hybrid contribution 0.213 -0.095 0.248 0.341 sum 2.024 1.220 1.179 2.641 Atomic orbital electron populations 1.86470 1.17970 1.80777 1.49775 1.23897 0.84964 1.09345 0.96063 0.95167 0.80882 0.77505 0.87800 1.19367 1.12104 0.92511 0.97620 1.22136 1.00883 0.95008 0.90414 1.47792 1.48727 1.04313 1.13143 1.21490 0.97150 1.03537 0.78672 1.20496 0.86666 0.81371 0.83091 1.90853 1.24764 1.41105 1.80587 1.45714 1.28641 1.57804 1.06046 1.21802 0.95048 0.99689 0.84271 1.22072 0.98388 0.78578 0.94837 1.92881 1.92863 1.35341 1.95340 1.23553 0.96967 1.01666 0.95845 1.22513 0.96319 0.97654 0.96153 0.87651 1.22137 0.85870 0.95365 0.95886 1.86483 1.35829 1.39721 1.75875 1.23718 0.98783 0.99296 0.96516 1.77771 1.19301 1.01577 1.08213 1.20660 0.97974 0.92236 0.92156 1.17776 0.96773 0.91953 0.95718 1.21939 0.94882 1.01203 0.93895 1.21136 1.00298 0.93686 0.99216 1.21296 0.95714 0.97129 0.98899 1.21077 0.97359 0.99307 0.96733 1.21216 0.99678 0.92332 0.97886 0.77230 0.90845 1.17861 1.18088 0.81079 0.86197 0.85406 0.75982 0.90013 0.89099 0.89111 0.87575 0.93093 0.93202 0.77012 0.87928 0.89614 0.82742 0.85652 0.85966 0.85829 0.85961 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.20 10.08 -35.23 -0.35 -0.56 16 2 C -0.03 -0.02 2.00 36.01 0.07 0.05 16 3 Si 0.69 -0.82 30.79 -169.99 -5.23 -6.05 16 4 C -0.20 -0.84 5.37 -104.76 -0.56 -1.40 16 5 C 0.06 0.19 9.96 -17.26 -0.17 0.01 16 6 N -0.36 -1.35 3.40 -62.58 -0.21 -1.56 16 7 C 0.12 -0.06 6.99 -5.19 -0.04 -0.10 16 8 C 0.50 1.02 7.86 -10.99 -0.09 0.93 16 9 O -0.50 -3.63 15.70 5.56 0.09 -3.54 16 10 N -0.73 0.58 5.47 -60.30 -0.33 0.25 16 11 C 0.12 -0.07 5.37 -4.04 -0.02 -0.09 16 12 C 0.08 -0.11 1.67 -89.81 -0.15 -0.26 16 13 F -0.18 -0.13 16.80 2.25 0.04 -0.10 16 14 C -0.14 0.31 7.10 -25.92 -0.18 0.13 16 15 C -0.11 0.13 3.98 -89.79 -0.36 -0.23 16 16 H 0.11 0.01 8.14 -51.93 -0.42 -0.41 16 17 C 0.09 -0.14 6.89 37.16 0.26 0.12 16 18 O -0.57 -0.04 13.66 -35.23 -0.48 -0.52 16 19 C -0.15 0.25 7.08 -25.90 -0.18 0.06 16 20 N -0.25 -1.68 11.63 33.43 0.39 -1.29 16 21 C 0.14 0.82 6.74 -82.78 -0.56 0.26 16 22 C -0.02 -0.11 5.80 -104.90 -0.61 -0.71 16 23 C -0.10 -0.37 8.94 -39.26 -0.35 -0.72 16 24 C -0.13 -0.28 10.03 -39.63 -0.40 -0.68 16 25 C -0.11 -0.23 10.04 -39.52 -0.40 -0.63 16 26 C -0.13 -0.35 10.03 -39.63 -0.40 -0.75 16 27 C -0.09 -0.40 9.75 -39.26 -0.38 -0.78 16 28 H 0.38 -1.86 8.74 45.56 0.40 -1.47 16 29 H 0.07 -0.01 7.84 -51.93 -0.41 -0.42 16 30 H -0.25 -0.34 7.03 56.52 0.40 0.06 16 31 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 32 H 0.17 0.06 6.36 -52.49 -0.33 -0.28 16 33 H 0.12 -0.36 8.14 -51.93 -0.42 -0.78 16 34 H 0.13 -0.54 8.07 -51.93 -0.42 -0.96 16 35 H 0.41 -1.30 8.18 -40.82 -0.33 -1.63 16 36 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 37 H 0.09 -0.05 7.94 -51.93 -0.41 -0.46 16 38 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 39 H 0.11 -0.38 8.06 -51.93 -0.42 -0.80 16 40 H 0.05 -0.12 8.14 -51.93 -0.42 -0.55 16 41 H 0.05 -0.13 7.85 -51.93 -0.41 -0.54 16 42 H 0.38 -1.54 9.12 45.56 0.42 -1.13 16 43 H 0.10 -0.25 7.72 -51.93 -0.40 -0.65 16 44 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 45 H 0.16 0.47 4.53 -52.48 -0.24 0.23 16 46 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 47 H 0.12 -0.01 8.06 -52.48 -0.42 -0.43 16 48 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 49 H 0.12 0.49 8.06 -52.48 -0.42 0.07 16 LS Contribution 412.75 15.07 6.22 6.22 Total: 0.00 -13.89 412.75 -10.38 -24.27 By element: Atomic # 1 Polarization: -6.37 SS G_CDS: -5.99 Total: -12.36 kcal Atomic # 6 Polarization: -0.24 SS G_CDS: -4.52 Total: -4.76 kcal Atomic # 7 Polarization: -2.45 SS G_CDS: -0.15 Total: -2.60 kcal Atomic # 8 Polarization: -3.87 SS G_CDS: -0.75 Total: -4.62 kcal Atomic # 9 Polarization: -0.13 SS G_CDS: 0.04 Total: -0.10 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.23 Total: -6.05 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -13.89 -10.38 -24.27 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12622748.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.991 kcal (2) G-P(sol) polarization free energy of solvation -13.887 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.896 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.383 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.270 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.279 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds