Wall clock time and date at job start Sun Mar 7 2021 08:57:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86306 * 109.46786 * 2 1 4 4 C 1.50705 * 109.46920 * 119.99286 * 2 1 3 5 5 C 1.35078 * 126.07762 * 255.27055 * 4 2 1 6 6 N 1.35041 * 107.97812 * 180.20114 * 5 4 2 7 7 C 1.46506 * 125.93228 * 179.84043 * 6 5 4 8 8 C 1.50695 * 109.47276 * 124.71280 * 7 6 5 9 9 O 1.21280 * 119.99964 * 0.02562 * 8 7 6 10 10 N 1.34775 * 120.00067 * 179.97438 * 8 7 6 11 11 C 1.46497 * 120.00100 * 179.97438 * 10 8 7 12 12 C 1.53006 * 109.47162 * 179.97438 * 11 10 8 13 13 F 1.39902 * 112.84809 * 48.80774 * 12 11 10 14 14 C 1.53783 * 113.61298 * 179.97438 * 12 11 10 15 15 C 1.53784 * 87.07757 * 139.98515 * 14 12 11 16 16 H 1.08994 * 113.61649 * 89.11582 * 15 14 12 17 17 C 1.52998 * 113.61350 * 219.93487 * 15 14 12 18 18 O 1.42893 * 109.47243 * 185.00137 * 17 15 14 19 19 C 1.53771 * 113.61669 * 277.50022 * 12 11 10 20 20 N 1.40072 * 108.13785 * 359.57093 * 6 5 4 21 21 C 1.31619 * 108.10718 * 0.27044 * 20 6 5 22 22 C 1.48423 * 126.03538 * 179.97438 * 21 20 6 23 23 C 1.39315 * 120.11802 * 144.74790 * 22 21 20 24 24 C 1.38030 * 119.87717 * 179.71861 * 23 22 21 25 25 C 1.38313 * 120.11855 * 0.55336 * 24 23 22 26 26 C 1.38319 * 120.24200 * 359.72022 * 25 24 23 27 27 C 1.38028 * 120.11785 * 0.02562 * 26 25 24 28 28 H 0.96706 * 114.00042 * 60.00797 * 1 2 3 29 29 H 1.08998 * 109.47773 * 239.99623 * 2 1 3 30 30 H 1.48497 * 110.00066 * 59.99468 * 3 2 1 31 31 H 1.48503 * 109.99653 * 181.31704 * 3 2 1 32 32 H 1.07998 * 126.01745 * 0.06763 * 5 4 2 33 33 H 1.08997 * 109.47120 * 244.71754 * 7 6 5 34 34 H 1.08998 * 109.46787 * 4.71270 * 7 6 5 35 35 H 0.97005 * 119.99845 * 0.02562 * 10 8 7 36 36 H 1.09002 * 109.47066 * 300.00101 * 11 10 8 37 37 H 1.08998 * 109.47179 * 60.00369 * 11 10 8 38 38 H 1.08997 * 113.61217 * 254.53190 * 14 12 11 39 39 H 1.08995 * 113.61634 * 25.35530 * 14 12 11 40 40 H 1.09005 * 109.47360 * 305.00261 * 17 15 14 41 41 H 1.09000 * 109.47199 * 64.99907 * 17 15 14 42 42 H 0.96707 * 114.00255 * 180.02562 * 18 17 15 43 43 H 1.09005 * 113.61305 * 334.56638 * 19 12 11 44 44 H 1.09002 * 113.61779 * 105.46498 * 19 12 11 45 45 H 1.08004 * 120.06590 * 359.97186 * 23 22 21 46 46 H 1.08001 * 119.94215 * 180.27279 * 24 23 22 47 47 H 1.08004 * 119.88001 * 179.74047 * 25 24 23 48 48 H 1.08001 * 119.94093 * 180.02562 * 26 25 24 49 49 H 1.08003 * 120.05748 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.4581 -0.1245 2.3278 6 7 2.7895 -1.0989 3.2021 7 6 3.3954 -0.9008 4.5212 8 6 2.5425 -1.5656 5.5707 9 8 1.5286 -2.1480 5.2486 10 7 2.9070 -1.5139 6.8672 11 6 2.0776 -2.1597 7.8876 12 6 2.7112 -1.9540 9.2650 13 9 3.0656 -0.6223 9.5066 14 6 1.9135 -2.5965 10.4121 15 6 3.2659 -3.0125 11.0145 16 1 3.6954 -2.2649 11.6814 17 6 3.2605 -4.4169 11.6214 18 8 4.5166 -4.6669 12.2549 19 6 3.8304 -2.9589 9.5846 20 7 2.4476 -2.3315 2.6314 21 6 1.9300 -2.1026 1.4430 22 6 1.4333 -3.1303 0.4943 23 6 0.3271 -2.8633 -0.3094 24 6 -0.1271 -3.8205 -1.1941 25 6 0.5069 -5.0471 -1.2754 26 6 1.6021 -5.3195 -0.4757 27 6 2.0678 -4.3677 0.4087 28 1 -0.3933 0.4416 -0.7652 29 1 1.7924 -0.5139 -0.8899 30 1 1.5612 2.4680 1.2084 31 1 3.5345 1.7704 -0.0321 32 1 2.5928 0.9364 2.4785 33 1 4.3931 -1.3395 4.5323 34 1 3.4654 0.1663 4.7323 35 1 3.7181 -1.0484 7.1248 36 1 1.0802 -1.7201 7.8767 37 1 2.0068 -3.2267 7.6764 38 1 1.3674 -1.8761 11.0211 39 1 1.2968 -3.4382 10.0972 40 1 2.4607 -4.4912 12.3583 41 1 3.0980 -5.1525 10.8336 42 1 4.5847 -5.5414 12.6622 43 1 3.7390 -3.9008 9.0436 44 1 4.8312 -2.5312 9.5257 45 1 -0.1716 -1.9076 -0.2433 46 1 -0.9818 -3.6129 -1.8209 47 1 0.1457 -5.7947 -1.9660 48 1 2.0937 -6.2788 -0.5434 49 1 2.9233 -4.5813 1.0324 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_12622748.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:32 Heat of formation + Delta-G solvation = -25.186611 kcal Electronic energy + Delta-G solvation = -33687.621653 eV Core-core repulsion = 28919.595400 eV Total energy + Delta-G solvation = -4768.026253 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.163 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -48.95702 -42.63566 -40.91574 -39.90242 -39.72588 -37.70887 -37.26144 -35.79720 -34.93889 -32.53505 -31.97175 -31.59471 -30.57930 -28.83207 -27.21617 -26.93794 -25.83483 -24.17426 -23.48865 -22.35699 -22.04429 -21.63248 -20.93748 -20.70859 -18.79080 -18.56737 -18.31822 -18.29340 -17.78079 -17.26926 -17.10130 -16.77019 -16.60041 -16.33691 -16.18119 -16.01145 -15.86265 -15.60406 -15.30104 -15.17570 -14.99749 -14.88324 -14.58328 -14.50735 -14.37300 -14.15642 -13.89592 -13.79942 -13.66509 -13.51391 -13.34257 -13.24667 -12.75107 -12.45557 -12.28905 -12.15932 -11.96412 -11.86713 -11.65765 -11.63749 -11.41746 -11.36587 -10.88037 -10.78514 -10.41023 -10.16210 -9.91058 -9.84059 -9.37124 -4.91086 0.03174 0.48561 0.60191 1.13949 1.28949 1.37591 1.57154 1.76389 1.85019 2.01078 2.88164 2.95032 3.03084 3.05052 3.22800 3.26961 3.40726 3.43201 3.50182 3.72757 3.75517 3.77159 3.94622 4.01793 4.04402 4.13910 4.15104 4.25902 4.28604 4.34560 4.37185 4.46253 4.48493 4.53140 4.56024 4.60430 4.64315 4.74330 4.77380 4.79474 4.83388 4.90926 4.97360 5.08242 5.17843 5.25197 5.30776 5.56381 5.61997 5.62194 5.69793 6.06895 6.20618 6.43817 6.83491 6.92560 7.00961 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.045 4.045 3 Si 0.790 3.210 4 C -0.227 4.227 5 C 0.055 3.945 6 N -0.361 5.361 7 C 0.109 3.891 8 C 0.500 3.500 9 O -0.560 6.560 10 N -0.712 5.712 11 C 0.117 3.883 12 C 0.083 3.917 13 F -0.196 7.196 14 C -0.136 4.136 15 C -0.112 4.112 16 H 0.088 0.912 17 C 0.083 3.917 18 O -0.598 6.598 19 C -0.140 4.140 20 N -0.289 5.289 21 C 0.114 3.886 22 C -0.043 4.043 23 C -0.110 4.110 24 C -0.125 4.125 25 C -0.114 4.114 26 C -0.131 4.131 27 C -0.111 4.111 28 H 0.402 0.598 29 H 0.078 0.922 30 H -0.285 1.285 31 H -0.289 1.289 32 H 0.197 0.803 33 H 0.147 0.853 34 H 0.170 0.830 35 H 0.419 0.581 36 H 0.070 0.930 37 H 0.091 0.909 38 H 0.089 0.911 39 H 0.122 0.878 40 H 0.059 0.941 41 H 0.062 0.938 42 H 0.398 0.602 43 H 0.112 0.888 44 H 0.081 0.919 45 H 0.159 0.841 46 H 0.151 0.849 47 H 0.148 0.852 48 H 0.141 0.859 49 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.387 2.184 -1.363 2.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.155 4.155 3 Si 0.693 3.307 4 C -0.238 4.238 5 C -0.090 4.090 6 N -0.143 5.143 7 C -0.015 4.015 8 C 0.285 3.715 9 O -0.437 6.437 10 N -0.367 5.367 11 C -0.007 4.007 12 C 0.064 3.936 13 F -0.176 7.176 14 C -0.174 4.174 15 C -0.131 4.131 16 H 0.107 0.893 17 C 0.006 3.994 18 O -0.407 6.407 19 C -0.178 4.178 20 N -0.110 5.110 21 C -0.051 4.051 22 C -0.045 4.045 23 C -0.129 4.129 24 C -0.143 4.143 25 C -0.132 4.132 26 C -0.149 4.149 27 C -0.130 4.130 28 H 0.253 0.747 29 H 0.096 0.904 30 H -0.212 1.212 31 H -0.216 1.216 32 H 0.214 0.786 33 H 0.164 0.836 34 H 0.187 0.813 35 H 0.256 0.744 36 H 0.088 0.912 37 H 0.109 0.891 38 H 0.108 0.892 39 H 0.140 0.860 40 H 0.077 0.923 41 H 0.081 0.919 42 H 0.247 0.753 43 H 0.130 0.870 44 H 0.100 0.900 45 H 0.176 0.824 46 H 0.169 0.831 47 H 0.166 0.834 48 H 0.159 0.841 49 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 1.767 1.842 0.227 2.563 hybrid contribution 0.243 -0.290 0.541 0.660 sum 2.010 1.552 0.768 2.653 Atomic orbital electron populations 1.86407 1.17829 1.81467 1.51372 1.24223 0.85291 1.11082 0.94884 0.93993 0.77333 0.73877 0.85480 1.19894 1.12481 0.92142 0.99276 1.22595 1.00267 0.95980 0.90158 1.48095 1.48348 1.03592 1.14231 1.21959 0.97233 1.06030 0.76261 1.20944 0.86029 0.80512 0.84020 1.90830 1.27427 1.43928 1.81553 1.45634 1.28780 1.56949 1.05304 1.21786 0.94661 0.99621 0.84676 1.22095 0.98891 0.78040 0.94576 1.92856 1.93006 1.36357 1.95395 1.23574 0.96691 1.02031 0.95107 1.22487 0.96832 0.97685 0.96077 0.89328 1.22219 0.85553 0.95241 0.96432 1.86436 1.36723 1.41219 1.76277 1.23713 0.98312 0.99444 0.96330 1.77658 1.20680 1.03646 1.09048 1.21011 0.98320 0.93542 0.92276 1.18036 0.97711 0.92328 0.96402 1.22092 0.94669 1.01938 0.94206 1.21472 1.00727 0.93333 0.98775 1.21643 0.95129 0.97650 0.98815 1.21344 0.97700 0.99619 0.96262 1.21289 1.00021 0.92927 0.98813 0.74689 0.90434 1.21197 1.21588 0.78597 0.83568 0.81311 0.74367 0.91198 0.89063 0.89185 0.85970 0.92291 0.91949 0.75251 0.86984 0.90012 0.82422 0.83148 0.83388 0.84069 0.86876 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.53 10.08 -148.98 -1.50 -2.03 16 2 C -0.05 -0.09 2.00 71.24 0.14 0.06 16 3 Si 0.79 -2.35 30.79 68.60 2.11 -0.24 16 4 C -0.23 -2.16 5.37 -19.95 -0.11 -2.27 16 5 C 0.06 0.38 9.96 83.47 0.83 1.21 16 6 N -0.36 -3.11 3.40 -351.92 -1.20 -4.31 16 7 C 0.11 -0.12 6.99 85.63 0.60 0.48 16 8 C 0.50 2.48 7.86 87.66 0.69 3.17 16 9 O -0.56 -9.39 15.70 -3.03 -0.05 -9.44 16 10 N -0.71 0.90 5.47 -463.07 -2.53 -1.63 16 11 C 0.12 -0.05 5.37 86.38 0.46 0.41 16 12 C 0.08 -0.20 1.67 -10.27 -0.02 -0.21 16 13 F -0.20 -0.35 16.80 44.97 0.76 0.41 16 14 C -0.14 0.59 7.10 31.12 0.22 0.82 16 15 C -0.11 0.25 3.98 -10.25 -0.04 0.21 16 16 H 0.09 0.11 8.14 -2.39 -0.02 0.09 16 17 C 0.08 -0.28 6.89 71.98 0.50 0.21 16 18 O -0.60 -0.13 13.66 -148.98 -2.03 -2.16 16 19 C -0.14 0.47 7.08 31.13 0.22 0.69 16 20 N -0.29 -4.63 11.63 -48.15 -0.56 -5.19 16 21 C 0.11 1.65 6.74 42.53 0.29 1.94 16 22 C -0.04 -0.54 5.80 -20.04 -0.12 -0.66 16 23 C -0.11 -0.94 8.94 22.48 0.20 -0.74 16 24 C -0.13 -0.53 10.03 22.24 0.22 -0.30 16 25 C -0.11 -0.42 10.04 22.31 0.22 -0.19 16 26 C -0.13 -0.81 10.03 22.24 0.22 -0.59 16 27 C -0.11 -1.22 9.75 22.48 0.22 -1.00 16 28 H 0.40 -4.18 8.74 -74.05 -0.65 -4.82 16 29 H 0.08 0.02 7.84 -2.39 -0.02 0.00 16 30 H -0.29 -0.60 7.03 99.48 0.70 0.10 16 31 H -0.29 -0.67 7.11 99.48 0.71 0.04 16 32 H 0.20 0.05 6.36 -2.91 -0.02 0.03 16 33 H 0.15 -0.97 8.14 -2.39 -0.02 -0.99 16 34 H 0.17 -1.70 8.07 -2.39 -0.02 -1.72 16 35 H 0.42 -2.85 8.18 -92.70 -0.76 -3.61 16 36 H 0.07 0.16 8.14 -2.39 -0.02 0.15 16 37 H 0.09 -0.02 7.94 -2.39 -0.02 -0.03 16 38 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 39 H 0.12 -0.93 8.06 -2.39 -0.02 -0.95 16 40 H 0.06 -0.31 8.14 -2.38 -0.02 -0.33 16 41 H 0.06 -0.38 7.85 -2.39 -0.02 -0.39 16 42 H 0.40 -3.21 9.12 -74.05 -0.68 -3.88 16 43 H 0.11 -0.58 7.72 -2.38 -0.02 -0.60 16 44 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 45 H 0.16 1.12 4.53 -2.91 -0.01 1.10 16 46 H 0.15 -0.23 8.06 -2.91 -0.02 -0.25 16 47 H 0.15 -0.28 8.06 -2.91 -0.02 -0.31 16 48 H 0.14 0.23 8.06 -2.91 -0.02 0.20 16 49 H 0.11 1.29 8.06 -2.91 -0.02 1.27 16 Total: 0.00 -35.56 412.75 -1.28 -36.84 By element: Atomic # 1 Polarization: -14.44 SS G_CDS: -1.03 Total: -15.47 kcal Atomic # 6 Polarization: -1.53 SS G_CDS: 4.76 Total: 3.22 kcal Atomic # 7 Polarization: -6.84 SS G_CDS: -4.29 Total: -11.13 kcal Atomic # 8 Polarization: -10.04 SS G_CDS: -3.58 Total: -13.63 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.76 Total: 0.41 kcal Atomic # 14 Polarization: -2.35 SS G_CDS: 2.11 Total: -0.24 kcal Total: -35.56 -1.28 -36.84 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12622748.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.652 kcal (2) G-P(sol) polarization free energy of solvation -35.560 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.909 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.278 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.838 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.187 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds