Wall clock time and date at job start Sun Mar 7 2021 08:57:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35879 * 117.00057 * 2 1 4 4 C 1.38822 * 119.93654 * 180.02562 * 3 2 1 5 5 C 1.37925 * 120.06617 * 180.02562 * 4 3 2 6 6 C 1.39353 * 119.93528 * 359.96601 * 5 4 3 7 7 C 1.48411 * 120.06386 * 179.97438 * 6 5 4 8 8 N 1.31626 * 126.03850 * 324.96787 * 7 6 5 9 9 N 1.40067 * 108.10377 * 179.80129 * 8 7 6 10 10 C 1.46509 * 125.92696 * 180.24527 * 9 8 7 11 11 C 1.50697 * 109.46753 * 305.16110 * 10 9 8 12 12 O 1.21278 * 120.00411 * 0.02562 * 11 10 9 13 13 N 1.34775 * 119.99802 * 179.97438 * 11 10 9 14 14 C 1.46498 * 120.00333 * 180.02562 * 13 11 10 15 15 C 1.52998 * 109.47307 * 180.02562 * 14 13 11 16 16 F 1.39898 * 112.85127 * 48.80139 * 15 14 13 17 17 C 1.53788 * 113.61436 * 179.97438 * 15 14 13 18 18 C 1.53781 * 87.07984 * 139.97885 * 17 15 14 19 19 H 1.08999 * 113.61424 * 89.12071 * 18 17 15 20 20 C 1.53002 * 113.60943 * 219.93243 * 18 17 15 21 21 O 1.42907 * 109.46794 * 185.00145 * 20 18 17 22 22 C 1.53779 * 113.61217 * 277.49255 * 15 14 13 23 23 C 1.35030 * 108.14642 * 0.38348 * 9 8 7 24 24 C 1.35093 * 107.97923 * 359.61872 * 23 9 8 25 25 C 1.50694 * 126.08037 * 180.22437 * 24 23 9 26 26 O 1.42901 * 109.46991 * 255.02598 * 25 24 23 27 27 Si 1.86300 * 109.46895 * 15.01962 * 25 24 23 28 28 C 1.39355 * 119.87043 * 0.26236 * 6 5 4 29 29 C 1.37921 * 119.93526 * 359.48849 * 28 6 5 30 30 H 1.08997 * 109.47228 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.46953 * 300.00093 * 1 2 3 32 32 H 1.09001 * 109.46803 * 60.00173 * 1 2 3 33 33 H 1.08002 * 119.96487 * 359.97438 * 4 3 2 34 34 H 1.07996 * 120.03228 * 179.97438 * 5 4 3 35 35 H 1.09003 * 109.46777 * 65.16427 * 10 9 8 36 36 H 1.09002 * 109.47052 * 185.15981 * 10 9 8 37 37 H 0.97009 * 119.99862 * 359.97438 * 13 11 10 38 38 H 1.09007 * 109.46802 * 300.00002 * 14 13 11 39 39 H 1.09002 * 109.47497 * 59.99734 * 14 13 11 40 40 H 1.08995 * 113.61258 * 254.52868 * 17 15 14 41 41 H 1.08996 * 113.61128 * 25.34361 * 17 15 14 42 42 H 1.08993 * 109.47639 * 304.99880 * 20 18 17 43 43 H 1.09001 * 109.47037 * 65.00443 * 20 18 17 44 44 H 0.96694 * 113.99846 * 180.02562 * 21 20 18 45 45 H 1.09000 * 113.61645 * 334.56886 * 22 15 14 46 46 H 1.08996 * 113.61509 * 105.47194 * 22 15 14 47 47 H 1.08002 * 126.01523 * 179.88717 * 23 9 8 48 48 H 1.08998 * 109.47700 * 135.02337 * 25 24 23 49 49 H 0.96702 * 114.00315 * 59.99589 * 26 25 24 50 50 H 1.48507 * 109.99829 * 180.02562 * 27 25 24 51 51 H 1.48496 * 110.00208 * 301.32195 * 27 25 24 52 52 H 1.08003 * 120.02956 * 179.71760 * 28 6 5 53 53 H 1.08002 * 119.96659 * 180.25243 * 29 28 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0459 1.2107 0.0000 4 6 3.4323 1.2818 -0.0005 5 6 4.0613 2.5093 0.0000 6 6 3.3037 3.6789 0.0004 7 6 3.9775 5.0012 0.0015 8 7 5.1053 5.2951 0.6132 9 7 5.3981 6.6417 0.3628 10 6 6.5688 7.3727 0.8544 11 6 6.6420 7.2531 2.3548 12 8 5.7996 6.6194 2.9545 13 7 7.6442 7.8496 3.0303 14 6 7.7157 7.7330 4.4888 15 6 8.9382 8.4964 5.0022 16 9 9.0296 9.7907 4.4790 17 6 9.1050 8.4368 6.5298 18 6 10.6147 8.2840 6.2802 19 1 11.1459 9.2339 6.2215 20 6 11.2922 7.2813 7.2165 21 8 12.7028 7.2943 6.9879 22 6 10.2485 7.6972 4.9063 23 6 4.4127 7.1502 -0.4077 24 6 3.5226 6.1635 -0.6512 25 6 2.2663 6.2849 -1.4745 26 8 1.1309 6.3258 -0.6077 27 14 2.3339 7.8495 -2.4835 28 6 1.9121 3.6044 0.0057 29 6 1.2887 2.3741 0.0000 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 4.0190 0.3750 -0.0005 34 1 5.1399 2.5640 0.0000 35 1 7.4719 6.9522 0.4118 36 1 6.4838 8.4235 0.5773 37 1 8.3186 8.3556 2.5505 38 1 6.8128 8.1536 4.9317 39 1 7.8006 6.6821 4.7657 40 1 8.8377 9.3650 7.0348 41 1 8.6454 7.5596 6.9852 42 1 11.0893 7.5561 8.2515 43 1 10.9020 6.2822 7.0226 44 1 13.1976 6.6808 7.5480 45 1 10.1030 6.6171 4.9175 46 1 10.9041 8.0286 4.1010 47 1 4.3495 8.1658 -0.7696 48 1 2.1840 5.4262 -2.1408 49 1 1.1373 7.0664 0.0141 50 1 1.1002 7.9813 -3.2996 51 1 2.4781 9.0255 -1.5882 52 1 1.3224 4.5092 0.0106 53 1 0.2103 2.3158 0.0000 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_12622750.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:36 Heat of formation + Delta-G solvation = -61.550768 kcal Electronic energy + Delta-G solvation = -37967.142318 eV Core-core repulsion = 32723.319386 eV Total energy + Delta-G solvation = -5243.822932 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.178 amu Computer time = 1.70 seconds Orbital eigenvalues (eV) -48.90482 -42.48367 -41.04896 -40.72178 -39.79288 -38.47493 -37.81764 -37.22437 -35.70109 -34.60678 -32.23769 -32.06612 -31.33169 -30.40494 -28.87207 -28.03584 -27.15431 -26.87676 -25.71042 -23.83758 -23.66430 -22.30318 -21.93065 -21.48724 -21.00160 -20.68333 -19.16246 -18.92363 -18.43928 -18.29014 -17.62900 -17.34207 -17.13043 -16.85279 -16.83262 -16.68867 -16.60449 -16.30870 -16.25945 -16.10059 -15.74240 -15.46034 -15.27378 -15.19843 -14.93559 -14.88950 -14.58040 -14.50431 -14.45844 -14.09214 -13.87864 -13.75582 -13.66323 -13.47675 -13.29007 -13.19123 -13.01552 -12.79716 -12.49468 -12.41215 -12.20245 -12.13312 -11.92356 -11.65508 -11.59371 -11.53141 -11.36719 -11.22365 -10.84689 -10.48761 -10.39428 -10.30859 -10.02968 -9.64658 -8.94146 -4.82441 0.06818 0.35287 0.82342 1.29644 1.42285 1.43857 1.66589 1.70715 1.98655 2.05905 2.32086 2.80011 2.99625 3.07935 3.10641 3.31283 3.37562 3.45886 3.48601 3.60673 3.71229 3.79603 3.88989 3.91355 3.94635 4.13828 4.18482 4.21914 4.25874 4.32107 4.35909 4.37786 4.41509 4.44622 4.51646 4.55725 4.56889 4.59816 4.60028 4.67905 4.71381 4.77833 4.81452 4.88519 4.90889 4.94883 5.07361 5.09615 5.17382 5.33792 5.35055 5.53840 5.58730 5.72073 5.91462 6.32971 6.37804 6.58672 6.64361 6.85753 7.04859 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.334 6.334 3 C 0.124 3.876 4 C -0.167 4.167 5 C -0.059 4.059 6 C -0.071 4.071 7 C 0.119 3.881 8 N -0.294 5.294 9 N -0.360 5.360 10 C 0.111 3.889 11 C 0.498 3.502 12 O -0.563 6.563 13 N -0.714 5.714 14 C 0.118 3.882 15 C 0.084 3.916 16 F -0.195 7.195 17 C -0.137 4.137 18 C -0.114 4.114 19 H 0.088 0.912 20 C 0.083 3.917 21 O -0.598 6.598 22 C -0.140 4.140 23 C 0.074 3.926 24 C -0.262 4.262 25 C -0.050 4.050 26 O -0.546 6.546 27 Si 0.781 3.219 28 C -0.065 4.065 29 C -0.213 4.213 30 H 0.119 0.881 31 H 0.062 0.938 32 H 0.066 0.934 33 H 0.141 0.859 34 H 0.132 0.868 35 H 0.146 0.854 36 H 0.176 0.824 37 H 0.419 0.581 38 H 0.069 0.931 39 H 0.089 0.911 40 H 0.089 0.911 41 H 0.121 0.879 42 H 0.058 0.942 43 H 0.062 0.938 44 H 0.397 0.603 45 H 0.112 0.888 46 H 0.082 0.918 47 H 0.216 0.784 48 H 0.107 0.893 49 H 0.384 0.616 50 H -0.306 1.306 51 H -0.264 1.264 52 H 0.159 0.841 53 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.926 3.921 -1.069 5.651 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.248 6.248 3 C 0.078 3.922 4 C -0.185 4.185 5 C -0.078 4.078 6 C -0.073 4.073 7 C -0.046 4.046 8 N -0.115 5.115 9 N -0.141 5.141 10 C -0.013 4.013 11 C 0.283 3.717 12 O -0.440 6.440 13 N -0.369 5.369 14 C -0.007 4.007 15 C 0.065 3.935 16 F -0.176 7.176 17 C -0.175 4.175 18 C -0.132 4.132 19 H 0.106 0.894 20 C 0.005 3.995 21 O -0.406 6.406 22 C -0.178 4.178 23 C -0.071 4.071 24 C -0.273 4.273 25 C -0.158 4.158 26 O -0.355 6.355 27 Si 0.684 3.316 28 C -0.084 4.084 29 C -0.232 4.232 30 H 0.137 0.863 31 H 0.081 0.919 32 H 0.084 0.916 33 H 0.159 0.841 34 H 0.150 0.850 35 H 0.164 0.836 36 H 0.193 0.807 37 H 0.256 0.744 38 H 0.087 0.913 39 H 0.108 0.892 40 H 0.107 0.893 41 H 0.139 0.861 42 H 0.076 0.924 43 H 0.081 0.919 44 H 0.247 0.753 45 H 0.130 0.870 46 H 0.101 0.899 47 H 0.233 0.767 48 H 0.125 0.875 49 H 0.234 0.766 50 H -0.234 1.234 51 H -0.190 1.190 52 H 0.176 0.824 53 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 3.825 3.669 -0.778 5.357 hybrid contribution -0.912 0.245 1.130 1.472 sum 2.913 3.914 0.352 4.892 Atomic orbital electron populations 1.23351 0.76442 1.05605 1.02279 1.86047 1.23467 1.26863 1.88389 1.19340 0.92638 0.84700 0.95495 1.20509 0.91726 0.98824 1.07455 1.21082 1.00093 0.90678 0.95963 1.17886 0.92950 0.89530 1.06930 1.20716 0.93253 0.94109 0.96554 1.77692 1.17571 0.93954 1.22301 1.48097 1.19444 1.07419 1.39159 1.21963 0.88403 1.00667 0.90248 1.21111 0.81094 0.78620 0.90853 1.90829 1.40836 1.41551 1.70749 1.45661 1.29139 1.54553 1.07519 1.21740 0.97195 1.01113 0.80635 1.22075 0.96209 0.79053 0.96173 1.92855 1.97170 1.39610 1.87927 1.23576 0.95200 1.05557 0.93188 1.22498 0.95188 0.99778 0.95756 0.89355 1.22225 0.80742 0.98309 0.98195 1.86436 1.19576 1.67695 1.66939 1.23706 0.94434 1.01168 0.98445 1.22826 0.88439 1.00706 0.95142 1.20527 1.02431 0.93081 1.11297 1.24583 0.81778 1.13955 0.95514 1.86436 1.43936 1.53051 1.52047 0.94035 0.85189 0.72323 0.80004 1.21775 0.93414 0.99093 0.94135 1.21397 1.01079 0.91613 1.09095 0.86325 0.91891 0.91571 0.84102 0.84970 0.83624 0.80678 0.74368 0.91259 0.89240 0.89276 0.86061 0.92403 0.91948 0.75283 0.87006 0.89930 0.76726 0.87456 0.76627 1.23376 1.19013 0.82420 0.83517 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 113.37 1.11 1.11 16 2 O -0.33 -2.68 10.49 -92.18 -0.97 -3.65 16 3 C 0.12 1.16 6.69 22.55 0.15 1.31 16 4 C -0.17 -1.56 9.97 22.34 0.22 -1.33 16 5 C -0.06 -0.59 9.74 22.46 0.22 -0.38 16 6 C -0.07 -0.77 5.80 -20.03 -0.12 -0.89 16 7 C 0.12 1.18 6.73 42.53 0.29 1.47 16 8 N -0.29 -3.25 11.62 -48.16 -0.56 -3.81 16 9 N -0.36 -0.84 3.40 -351.89 -1.20 -2.03 16 10 C 0.11 -0.70 6.99 85.63 0.60 -0.10 16 11 C 0.50 0.59 7.86 87.66 0.69 1.28 16 12 O -0.56 -7.36 15.69 -3.02 -0.05 -7.41 16 13 N -0.71 2.89 5.47 -463.06 -2.53 0.36 16 14 C 0.12 -0.28 5.36 86.38 0.46 0.18 16 15 C 0.08 -0.33 1.67 -10.27 -0.02 -0.34 16 16 F -0.20 -0.02 16.80 44.97 0.76 0.73 16 17 C -0.14 0.74 7.10 31.12 0.22 0.96 16 18 C -0.11 0.35 3.98 -10.25 -0.04 0.31 16 19 H 0.09 0.03 8.14 -2.39 -0.02 0.01 16 20 C 0.08 -0.34 6.89 71.98 0.50 0.16 16 21 O -0.60 0.25 13.66 -148.98 -2.04 -1.79 16 22 C -0.14 0.64 7.09 31.13 0.22 0.86 16 23 C 0.07 -0.10 9.96 83.48 0.83 0.74 16 24 C -0.26 -0.89 5.34 -19.95 -0.11 -1.00 16 25 C -0.05 -0.04 2.00 71.23 0.14 0.11 16 26 O -0.55 -1.50 10.10 -148.98 -1.50 -3.00 16 27 Si 0.78 -3.08 30.81 68.60 2.11 -0.97 16 28 C -0.07 -0.61 8.94 22.46 0.20 -0.41 16 29 C -0.21 -1.65 9.02 22.33 0.20 -1.45 16 30 H 0.12 -0.45 8.14 -2.39 -0.02 -0.47 16 31 H 0.06 -0.07 7.65 -2.39 -0.02 -0.09 16 32 H 0.07 -0.11 7.66 -2.39 -0.02 -0.13 16 33 H 0.14 0.91 8.06 -2.91 -0.02 0.88 16 34 H 0.13 1.15 8.06 -2.91 -0.02 1.13 16 35 H 0.15 -1.65 8.14 -2.39 -0.02 -1.67 16 36 H 0.18 -2.81 8.07 -2.39 -0.02 -2.83 16 37 H 0.42 -4.00 8.19 -92.70 -0.76 -4.76 16 38 H 0.07 0.03 8.14 -2.38 -0.02 0.01 16 39 H 0.09 -0.16 7.94 -2.39 -0.02 -0.18 16 40 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 41 H 0.12 -1.03 8.06 -2.39 -0.02 -1.05 16 42 H 0.06 -0.33 8.14 -2.39 -0.02 -0.35 16 43 H 0.06 -0.42 7.85 -2.39 -0.02 -0.44 16 44 H 0.40 -3.41 9.12 -74.06 -0.68 -4.09 16 45 H 0.11 -0.71 7.72 -2.39 -0.02 -0.73 16 46 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 47 H 0.22 -2.20 6.33 -2.91 -0.02 -2.21 16 48 H 0.11 0.20 7.84 -2.39 -0.02 0.18 16 49 H 0.38 -0.94 8.70 -74.06 -0.64 -1.58 16 50 H -0.31 -1.36 7.11 99.48 0.71 -0.65 16 51 H -0.26 0.83 6.99 99.48 0.70 1.52 16 52 H 0.16 1.32 4.51 -2.91 -0.01 1.30 16 53 H 0.15 0.48 6.28 -2.91 -0.02 0.46 16 Total: 0.00 -34.22 442.10 -1.26 -35.48 By element: Atomic # 1 Polarization: -15.46 SS G_CDS: -1.06 Total: -16.52 kcal Atomic # 6 Polarization: -3.17 SS G_CDS: 5.77 Total: 2.60 kcal Atomic # 7 Polarization: -1.19 SS G_CDS: -4.29 Total: -5.48 kcal Atomic # 8 Polarization: -11.30 SS G_CDS: -4.55 Total: -15.85 kcal Atomic # 9 Polarization: -0.02 SS G_CDS: 0.76 Total: 0.73 kcal Atomic # 14 Polarization: -3.08 SS G_CDS: 2.11 Total: -0.97 kcal Total: -34.22 -1.26 -35.48 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12622750.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.068 kcal (2) G-P(sol) polarization free energy of solvation -34.225 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.293 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.258 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.483 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.551 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.70 seconds