Wall clock time and date at job start Sun Mar 7 2021 08:57:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86310 * 109.47036 * 2 1 4 4 C 1.50703 * 109.47384 * 119.99877 * 2 1 3 5 5 C 1.34832 * 125.65064 * 65.25797 * 4 2 1 6 6 C 1.40795 * 107.04954 * 180.13509 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.62775 * 6 5 4 8 8 C 1.47569 * 125.94728 * 180.26566 * 7 6 5 9 9 C 1.39922 * 119.95362 * 359.97438 * 8 7 6 10 10 C 1.36425 * 120.27876 * 180.02562 * 9 8 7 11 11 C 1.39873 * 120.18577 * 359.97438 * 10 9 8 12 12 C 1.47292 * 120.04798 * 179.97438 * 11 10 9 13 13 O 1.21620 * 120.00118 * 179.97438 * 12 11 10 14 14 N 1.34780 * 119.99874 * 0.02562 * 12 11 10 15 15 C 1.46498 * 120.00019 * 179.97438 * 14 12 11 16 16 C 1.52992 * 109.47213 * 180.02562 * 15 14 12 17 17 F 1.39901 * 112.85034 * 316.19866 * 16 15 14 18 18 C 1.53785 * 113.61509 * 87.50413 * 16 15 14 19 19 C 1.53776 * 87.08321 * 139.98226 * 18 16 15 20 20 H 1.09004 * 113.61657 * 89.11666 * 19 18 16 21 21 C 1.52997 * 113.69239 * 220.00865 * 19 18 16 22 22 O 1.42909 * 109.47049 * 272.53620 * 21 19 18 23 23 C 1.53778 * 87.08082 * 334.56816 * 19 18 16 24 24 C 1.40407 * 119.90923 * 359.97438 * 11 10 9 25 25 O 1.35679 * 120.14167 * 179.97438 * 24 11 10 26 26 C 1.38284 * 119.72088 * 359.74425 * 24 11 10 27 27 O 1.34226 * 125.65134 * 244.97269 * 4 2 1 28 28 H 0.96697 * 113.99670 * 299.99439 * 1 2 3 29 29 H 1.09005 * 109.47504 * 240.00193 * 2 1 3 30 30 H 1.48490 * 109.99973 * 178.68216 * 3 2 1 31 31 H 1.48505 * 109.99738 * 300.00379 * 3 2 1 32 32 H 1.08005 * 126.47500 * 0.02562 * 5 4 2 33 33 H 1.08002 * 126.63743 * 179.89704 * 6 5 4 34 34 H 1.07995 * 119.86085 * 0.02562 * 9 8 7 35 35 H 1.07995 * 119.90808 * 180.02562 * 10 9 8 36 36 H 0.96996 * 120.00029 * 0.02562 * 14 12 11 37 37 H 1.09003 * 109.47258 * 300.00116 * 15 14 12 38 38 H 1.09002 * 109.46891 * 59.99965 * 15 14 12 39 39 H 1.09008 * 113.61267 * 254.52917 * 18 16 15 40 40 H 1.08997 * 113.61463 * 25.42811 * 18 16 15 41 41 H 1.08996 * 109.47030 * 32.53061 * 21 19 18 42 42 H 1.08994 * 109.47650 * 152.53576 * 21 19 18 43 43 H 0.96697 * 113.99379 * 179.97438 * 22 21 19 44 44 H 1.08995 * 113.61448 * 270.88412 * 23 19 18 45 45 H 1.08998 * 113.61824 * 139.98068 * 23 19 18 46 46 H 0.96701 * 114.00242 * 89.99543 * 25 24 11 47 47 H 1.08001 * 120.09216 * 180.27220 * 26 24 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7611 -2.0190 1.5070 6 6 2.3804 -2.2628 2.7477 7 6 2.9082 -1.0784 3.1617 8 6 3.6583 -0.8543 4.4126 9 6 3.8792 -1.9177 5.2948 10 6 4.5713 -1.7179 6.4533 11 6 5.0657 -0.4476 6.7670 12 6 5.8121 -0.2352 8.0189 13 8 6.2420 0.8696 8.2907 14 7 6.0196 -1.2654 8.8629 15 6 6.7624 -1.0543 10.1078 16 6 6.8557 -2.3740 10.8761 17 9 5.6461 -3.0766 10.8978 18 6 8.0641 -3.2364 10.4749 19 6 8.2229 -3.5690 11.9678 20 1 7.6550 -4.4444 12.2830 21 6 9.6782 -3.6040 12.4385 22 8 10.2147 -4.9122 12.2309 23 6 7.5130 -2.2364 12.2595 24 6 4.8495 0.6248 5.8869 25 8 5.3265 1.8591 6.1868 26 6 4.1525 0.4167 4.7109 27 8 2.6272 -0.1464 2.2302 28 1 -0.3933 0.4416 0.7651 29 1 1.7924 -0.5138 -0.8900 30 1 3.5345 1.7704 0.0321 31 1 1.5614 2.4680 -1.2085 32 1 1.2453 -2.7430 0.8936 33 1 2.4312 -3.2078 3.2681 34 1 3.5002 -2.9007 5.0576 35 1 4.7387 -2.5430 7.1297 36 1 5.6777 -2.1467 8.6457 37 1 7.7660 -0.6975 9.8760 38 1 6.2455 -0.3138 10.7182 39 1 7.8011 -4.0980 9.8612 40 1 8.8942 -2.6611 10.0649 41 1 10.2610 -2.8782 11.8713 42 1 9.7232 -3.3570 13.4991 43 1 11.1365 -5.0076 12.5070 44 1 8.1925 -1.3877 12.3376 45 1 6.8052 -2.2906 13.0866 46 1 6.2198 2.0265 5.8564 47 1 3.9865 1.2364 4.0275 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:42 Heat of formation + Delta-G solvation = -127.924151 kcal Electronic energy + Delta-G solvation = -33452.902096 eV Core-core repulsion = 28484.983484 eV Total energy + Delta-G solvation = -4967.918611 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.140 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -48.91197 -43.75561 -41.52706 -40.15298 -39.48348 -38.12680 -37.83436 -37.27816 -35.57469 -34.26712 -33.51818 -31.39079 -30.85064 -29.99049 -27.64808 -27.19916 -26.59812 -24.39538 -24.09943 -22.60135 -22.23041 -21.95388 -21.35088 -20.79992 -19.80019 -18.96491 -18.54569 -18.40219 -17.70271 -17.61869 -17.45472 -17.07161 -16.77562 -16.66606 -16.55105 -16.22255 -16.02222 -15.96678 -15.79199 -15.53681 -15.27872 -15.03636 -14.74091 -14.36176 -14.27717 -14.22175 -14.03963 -13.90925 -13.84297 -13.65526 -13.59913 -13.46313 -13.30603 -12.88223 -12.76161 -12.49036 -12.13202 -12.02208 -11.86242 -11.61796 -11.45480 -11.14792 -10.99850 -10.81868 -10.75243 -10.60957 -10.19997 -9.98395 -9.03709 -5.07733 -0.80791 0.09369 0.63818 1.09366 1.38401 1.44010 1.72872 1.88560 1.92818 1.96206 2.61558 2.86433 2.96590 2.99285 3.03768 3.19832 3.20562 3.33345 3.38025 3.52225 3.61449 3.66580 3.83243 3.88909 3.92669 4.11207 4.14086 4.18812 4.24554 4.31036 4.34810 4.38605 4.40712 4.48835 4.52238 4.56758 4.65098 4.68894 4.74830 4.77592 4.82055 4.82329 4.98186 5.05939 5.15469 5.17855 5.28532 5.36148 5.44125 5.94216 6.34665 6.35409 6.56556 6.66496 7.14666 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.028 4.028 3 Si 0.700 3.300 4 C -0.045 4.045 5 C -0.174 4.174 6 C -0.177 4.177 7 C 0.023 3.977 8 C 0.031 3.969 9 C -0.116 4.116 10 C -0.063 4.063 11 C -0.165 4.165 12 C 0.561 3.439 13 O -0.517 6.517 14 N -0.727 5.727 15 C 0.115 3.885 16 C 0.080 3.920 17 F -0.184 7.184 18 C -0.146 4.146 19 C -0.109 4.109 20 H 0.105 0.895 21 C 0.085 3.915 22 O -0.573 6.573 23 C -0.142 4.142 24 C 0.179 3.821 25 O -0.474 6.474 26 C -0.141 4.141 27 O -0.161 6.161 28 H 0.384 0.616 29 H 0.134 0.866 30 H -0.253 1.253 31 H -0.245 1.245 32 H 0.155 0.845 33 H 0.156 0.844 34 H 0.139 0.861 35 H 0.136 0.864 36 H 0.403 0.597 37 H 0.090 0.910 38 H 0.083 0.917 39 H 0.085 0.915 40 H 0.102 0.898 41 H 0.050 0.950 42 H 0.051 0.949 43 H 0.382 0.618 44 H 0.106 0.894 45 H 0.090 0.910 46 H 0.399 0.601 47 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.375 -2.026 1.464 3.448 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.139 4.139 3 Si 0.600 3.400 4 C -0.096 4.096 5 C -0.193 4.193 6 C -0.196 4.196 7 C -0.027 4.027 8 C 0.031 3.969 9 C -0.134 4.134 10 C -0.082 4.082 11 C -0.169 4.169 12 C 0.348 3.652 13 O -0.393 6.393 14 N -0.381 5.381 15 C -0.009 4.009 16 C 0.061 3.939 17 F -0.164 7.164 18 C -0.183 4.183 19 C -0.127 4.127 20 H 0.123 0.877 21 C 0.008 3.992 22 O -0.379 6.379 23 C -0.180 4.180 24 C 0.133 3.867 25 O -0.285 6.285 26 C -0.159 4.159 27 O -0.058 6.058 28 H 0.232 0.768 29 H 0.151 0.849 30 H -0.177 1.177 31 H -0.170 1.170 32 H 0.173 0.827 33 H 0.174 0.826 34 H 0.157 0.843 35 H 0.154 0.846 36 H 0.239 0.761 37 H 0.109 0.891 38 H 0.101 0.899 39 H 0.104 0.896 40 H 0.121 0.879 41 H 0.068 0.932 42 H 0.069 0.931 43 H 0.229 0.771 44 H 0.124 0.876 45 H 0.109 0.891 46 H 0.257 0.743 47 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 2.188 -0.657 0.752 2.406 hybrid contribution 0.677 -1.384 -0.131 1.546 sum 2.865 -2.041 0.622 3.572 Atomic orbital electron populations 1.86564 1.16083 1.81748 1.49173 1.24425 0.85266 1.11287 0.92873 0.94203 0.81606 0.76907 0.87277 1.23001 1.00536 0.93865 0.92150 1.21585 1.04049 0.95669 0.97988 1.21918 1.01969 0.98409 0.97288 1.20320 1.03825 0.87528 0.91023 1.17755 0.95431 0.93758 0.89988 1.20708 1.00171 0.98780 0.93723 1.20833 0.95411 0.95523 0.96421 1.20437 1.04777 0.94388 0.97298 1.17954 0.79765 0.84264 0.83199 1.90850 1.49875 1.23329 1.75271 1.45742 1.58001 1.12799 1.21532 1.21811 0.98495 0.95649 0.84981 1.22084 0.81712 0.91434 0.98677 1.92874 1.46259 1.80064 1.97219 1.23729 0.96785 1.00295 0.97534 1.22513 0.95746 0.98526 0.95948 0.87672 1.22140 0.93192 0.84565 0.99347 1.86489 1.32194 1.31271 1.87960 1.23560 0.99948 0.98523 0.95998 1.18271 0.93910 0.84046 0.90509 1.84778 1.36292 1.27539 1.79902 1.21590 1.00329 0.97115 0.96905 1.83935 1.57565 1.37874 1.26459 0.76770 0.84902 1.17691 1.16958 0.82696 0.82601 0.84306 0.84595 0.76086 0.89143 0.89878 0.89645 0.87925 0.93203 0.93112 0.77052 0.87560 0.89120 0.74276 0.83753 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.24 12.88 -35.23 -0.45 -0.21 16 2 C -0.03 0.02 2.98 36.01 0.11 0.13 16 3 Si 0.70 -0.64 32.11 -169.99 -5.46 -6.10 16 4 C -0.05 -0.03 6.21 -35.51 -0.22 -0.25 16 5 C -0.17 -0.10 10.78 -39.82 -0.43 -0.53 16 6 C -0.18 -0.03 10.26 -39.38 -0.40 -0.43 16 7 C 0.02 0.02 7.02 -36.54 -0.26 -0.23 16 8 C 0.03 0.01 5.87 -104.95 -0.62 -0.60 16 9 C -0.12 0.14 9.48 -39.60 -0.38 -0.24 16 10 C -0.06 0.08 9.47 -39.62 -0.38 -0.30 16 11 C -0.17 -0.20 5.89 -104.79 -0.62 -0.82 16 12 C 0.56 1.36 7.75 -12.58 -0.10 1.26 16 13 O -0.52 -2.95 15.14 -16.69 -0.25 -3.20 16 14 N -0.73 0.09 5.40 -61.43 -0.33 -0.24 16 15 C 0.11 -0.09 5.42 -4.05 -0.02 -0.11 16 16 C 0.08 -0.12 1.74 -89.81 -0.16 -0.27 16 17 F -0.18 -0.13 16.58 2.25 0.04 -0.09 16 18 C -0.15 0.28 7.08 -25.92 -0.18 0.10 16 19 C -0.11 0.16 3.98 -89.81 -0.36 -0.20 16 20 H 0.11 -0.01 8.14 -51.93 -0.42 -0.43 16 21 C 0.09 -0.17 6.89 37.16 0.26 0.09 16 22 O -0.57 0.12 13.66 -35.23 -0.48 -0.36 16 23 C -0.14 0.36 7.10 -25.92 -0.18 0.18 16 24 C 0.18 0.31 6.71 -38.75 -0.26 0.05 16 25 O -0.47 -1.12 11.56 -40.69 -0.47 -1.59 16 26 C -0.14 -0.12 9.65 -39.06 -0.38 -0.50 16 27 O -0.16 -0.21 8.79 4.72 0.04 -0.17 16 28 H 0.38 -1.58 8.70 45.56 0.40 -1.18 16 29 H 0.13 -0.15 7.96 -51.93 -0.41 -0.56 16 30 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 31 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 32 H 0.16 -0.09 8.06 -52.48 -0.42 -0.51 16 33 H 0.16 -0.33 7.24 -52.49 -0.38 -0.71 16 34 H 0.14 -0.47 6.95 -52.49 -0.36 -0.84 16 35 H 0.14 -0.51 6.38 -52.49 -0.33 -0.85 16 36 H 0.40 -0.76 6.03 -40.82 -0.25 -1.01 16 37 H 0.09 -0.12 7.84 -51.93 -0.41 -0.53 16 38 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 39 H 0.08 -0.12 8.14 -51.92 -0.42 -0.54 16 40 H 0.10 -0.30 7.65 -51.93 -0.40 -0.69 16 41 H 0.05 -0.16 7.85 -51.93 -0.41 -0.56 16 42 H 0.05 -0.14 8.14 -51.93 -0.42 -0.56 16 43 H 0.38 -1.65 9.12 45.56 0.42 -1.23 16 44 H 0.11 -0.43 8.06 -51.93 -0.42 -0.85 16 45 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 46 H 0.40 -0.58 9.06 45.56 0.41 -0.17 16 47 H 0.14 0.01 7.90 -52.49 -0.41 -0.41 16 LS Contribution 404.13 15.07 6.09 6.09 Total: 0.00 -11.15 404.13 -10.14 -21.29 By element: Atomic # 1 Polarization: -8.46 SS G_CDS: -4.29 Total: -12.75 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -4.57 Total: -2.67 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: -0.33 Total: -0.24 kcal Atomic # 8 Polarization: -3.91 SS G_CDS: -1.62 Total: -5.53 kcal Atomic # 9 Polarization: -0.13 SS G_CDS: 0.04 Total: -0.09 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.46 Total: -6.10 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -11.15 -10.14 -21.29 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.635 kcal (2) G-P(sol) polarization free energy of solvation -11.147 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.783 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.289 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.924 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds