Wall clock time and date at job start Sun Mar 7 2021 08:57:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50711 * 1 3 3 C 1.39282 * 121.02876 * 2 1 4 4 C 1.46497 * 134.19812 * 0.73042 * 3 2 1 5 5 C 1.50697 * 126.59680 * 359.23537 * 4 3 2 6 6 O 1.42905 * 109.47182 * 75.28596 * 5 4 3 7 7 Si 1.86295 * 109.47214 * 195.28634 * 5 4 3 8 8 C 1.34177 * 106.80341 * 179.49993 * 4 3 2 9 9 N 1.36946 * 109.95032 * 359.75801 * 8 4 3 10 10 C 1.37157 * 110.11616 * 0.02562 * 9 8 4 11 11 N 1.32818 * 132.96646 * 180.02562 * 10 9 8 12 12 C 1.31318 * 121.88958 * 179.97438 * 11 10 9 13 13 C 1.39746 * 121.02918 * 180.27384 * 2 1 3 14 14 C 1.47665 * 120.45570 * 359.97438 * 13 2 1 15 15 O 1.21570 * 120.00267 * 353.98025 * 14 13 2 16 16 N 1.34776 * 119.99821 * 173.98264 * 14 13 2 17 17 C 1.46504 * 120.00214 * 180.02562 * 16 14 13 18 18 C 1.52994 * 109.47393 * 179.97438 * 17 16 14 19 19 F 1.39898 * 112.85189 * 314.66788 * 18 17 16 20 20 C 1.53785 * 113.61294 * 85.86047 * 18 17 16 21 21 C 1.53956 * 87.01795 * 139.95197 * 20 18 17 22 22 H 1.09004 * 113.53954 * 89.19329 * 21 20 18 23 23 C 1.53000 * 113.74444 * 220.05382 * 21 20 18 24 24 O 1.42900 * 109.47251 * 272.60039 * 23 21 20 25 25 C 1.53778 * 87.11173 * 334.63601 * 21 20 18 26 26 H 1.08994 * 109.47163 * 263.30788 * 1 2 3 27 27 H 1.09002 * 109.46996 * 143.30812 * 1 2 3 28 28 H 1.09000 * 109.46685 * 23.31093 * 1 2 3 29 29 H 1.09002 * 109.47383 * 315.29093 * 5 4 3 30 30 H 0.96703 * 114.00079 * 179.97438 * 6 5 4 31 31 H 1.48503 * 110.00121 * 178.68280 * 7 5 4 32 32 H 1.48497 * 110.00105 * 300.00135 * 7 5 4 33 33 H 1.08002 * 125.02353 * 179.76124 * 8 4 3 34 34 H 0.96996 * 124.94093 * 179.97438 * 9 8 4 35 35 H 1.07997 * 119.30923 * 179.97438 * 12 11 10 36 36 H 0.97002 * 120.00606 * 359.97438 * 16 14 13 37 37 H 1.09001 * 109.46835 * 299.99727 * 17 16 14 38 38 H 1.08994 * 109.47264 * 59.99435 * 17 16 14 39 39 H 1.09000 * 113.61455 * 254.52408 * 20 18 17 40 40 H 1.08997 * 113.61607 * 25.43440 * 20 18 17 41 41 H 1.09008 * 109.46995 * 32.59992 * 23 21 20 42 42 H 1.08999 * 109.47297 * 152.59475 * 23 21 20 43 43 H 0.96702 * 113.99745 * 179.97438 * 24 23 21 44 44 H 1.08998 * 113.61465 * 270.81025 * 25 21 20 45 45 H 1.09005 * 113.61086 * 139.91246 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2251 1.1935 0.0000 4 6 1.8516 2.6100 0.0134 5 6 0.4526 3.1703 0.0162 6 8 -0.1194 3.0168 1.3167 7 14 0.5070 4.9785 -0.4287 8 6 2.9947 3.3126 0.0167 9 7 4.0668 2.4605 0.0120 10 6 3.6348 1.1588 0.0048 11 7 4.2721 -0.0065 -0.0012 12 6 3.6267 -1.1501 -0.0072 13 6 2.2275 -1.1975 -0.0057 14 6 1.5225 -2.4950 -0.0114 15 8 0.3124 -2.5298 0.0994 16 7 2.2208 -3.6407 -0.1392 17 6 1.5214 -4.9280 -0.1454 18 6 2.5383 -6.0602 -0.3026 19 9 3.4865 -5.8042 -1.2989 20 6 3.1532 -6.5251 1.0281 21 6 3.0444 -7.9612 0.4840 22 1 3.9225 -8.2822 -0.0764 23 6 2.6012 -8.9849 1.5312 24 8 3.7466 -9.4809 2.2270 25 6 1.8972 -7.4541 -0.4058 26 1 -0.3633 -0.1198 1.0206 27 1 -0.3633 -0.8241 -0.6141 28 1 -0.3633 0.9438 -0.4067 29 1 -0.1548 2.6347 -0.7133 30 1 -1.0215 3.3568 1.3923 31 1 -0.8693 5.5354 -0.4605 32 1 1.3322 5.7199 0.5585 33 1 3.0597 4.3906 0.0224 34 1 4.9965 2.7374 0.0128 35 1 4.1871 -2.0734 -0.0124 36 1 3.1863 -3.6130 -0.2279 37 1 0.9810 -5.0523 0.7930 38 1 0.8169 -4.9548 -0.9766 39 1 4.1798 -6.1898 1.1755 40 1 2.5169 -6.3364 1.8926 41 1 1.9233 -8.5093 2.2401 42 1 2.0897 -9.8113 1.0378 43 1 3.5400 -10.1356 2.9080 44 1 0.9169 -7.5199 0.0661 45 1 1.9113 -7.8677 -1.4142 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_12890568.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:46 Heat of formation + Delta-G solvation = -57.789091 kcal Electronic energy + Delta-G solvation = -30736.045124 eV Core-core repulsion = 26250.368881 eV Total energy + Delta-G solvation = -4485.676243 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.147 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -48.84666 -42.78681 -40.86366 -39.89116 -38.64460 -37.83350 -37.25927 -35.81264 -34.82328 -32.06067 -31.56384 -29.92813 -28.78072 -27.31683 -27.07520 -26.29960 -24.51886 -23.83138 -22.25736 -21.78465 -20.77784 -20.34148 -19.18315 -18.85800 -18.49964 -18.36149 -17.77851 -17.28797 -16.96979 -16.79357 -16.50657 -16.33808 -16.28568 -15.77230 -15.70799 -15.47353 -15.17061 -15.03452 -14.75461 -14.63200 -14.39551 -14.06795 -13.91104 -13.70548 -13.64703 -13.55729 -13.43271 -13.26210 -13.16235 -12.91110 -12.64159 -12.42464 -11.99242 -11.96863 -11.55695 -11.40340 -11.09622 -11.00272 -10.93506 -10.37863 -10.20458 -10.14196 -9.53924 -9.08035 -5.01425 -0.19041 0.00024 1.22515 1.39675 1.52266 1.66542 1.89864 1.93914 2.01599 2.87838 2.91902 3.02420 3.08962 3.24558 3.31454 3.38124 3.43767 3.60320 3.68345 3.72191 3.77628 3.83323 4.11121 4.14906 4.16040 4.23549 4.32892 4.35669 4.38606 4.44082 4.45796 4.55797 4.57679 4.69656 4.74356 4.82202 4.83660 4.87441 4.96887 5.08100 5.21783 5.26544 5.34059 5.38952 5.55979 5.81489 6.15346 6.42846 6.48294 6.60470 6.90569 7.21765 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 C 0.085 3.915 3 C -0.149 4.149 4 C -0.133 4.133 5 C -0.044 4.044 6 O -0.533 6.533 7 Si 0.681 3.319 8 C 0.072 3.928 9 N -0.569 5.569 10 C 0.309 3.691 11 N -0.502 5.502 12 C 0.181 3.819 13 C -0.234 4.234 14 C 0.575 3.425 15 O -0.530 6.530 16 N -0.727 5.727 17 C 0.115 3.885 18 C 0.080 3.920 19 F -0.184 7.184 20 C -0.146 4.146 21 C -0.109 4.109 22 H 0.105 0.895 23 C 0.085 3.915 24 O -0.573 6.573 25 C -0.142 4.142 26 H 0.086 0.914 27 H 0.097 0.903 28 H 0.067 0.933 29 H 0.078 0.922 30 H 0.378 0.622 31 H -0.258 1.258 32 H -0.253 1.253 33 H 0.184 0.816 34 H 0.426 0.574 35 H 0.162 0.838 36 H 0.403 0.597 37 H 0.091 0.909 38 H 0.083 0.917 39 H 0.085 0.915 40 H 0.102 0.898 41 H 0.050 0.950 42 H 0.050 0.950 43 H 0.382 0.618 44 H 0.106 0.894 45 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.678 0.290 -1.227 1.432 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.077 3.923 3 C -0.156 4.156 4 C -0.141 4.141 5 C -0.154 4.154 6 O -0.340 6.340 7 Si 0.581 3.419 8 C -0.055 4.055 9 N -0.175 5.175 10 C 0.076 3.924 11 N -0.215 5.215 12 C 0.013 3.987 13 C -0.242 4.242 14 C 0.363 3.637 15 O -0.408 6.408 16 N -0.380 5.380 17 C -0.009 4.009 18 C 0.061 3.939 19 F -0.164 7.164 20 C -0.184 4.184 21 C -0.127 4.127 22 H 0.123 0.877 23 C 0.008 3.992 24 O -0.379 6.379 25 C -0.180 4.180 26 H 0.104 0.896 27 H 0.115 0.885 28 H 0.086 0.914 29 H 0.096 0.904 30 H 0.226 0.774 31 H -0.182 1.182 32 H -0.177 1.177 33 H 0.201 0.799 34 H 0.265 0.735 35 H 0.179 0.821 36 H 0.239 0.761 37 H 0.109 0.891 38 H 0.101 0.899 39 H 0.104 0.896 40 H 0.121 0.879 41 H 0.068 0.932 42 H 0.068 0.932 43 H 0.229 0.771 44 H 0.124 0.876 45 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 0.198 1.402 -1.209 1.862 hybrid contribution -0.869 -0.591 1.041 1.479 sum -0.671 0.812 -0.168 1.066 Atomic orbital electron populations 1.21160 0.88925 1.03498 1.04216 1.19874 0.97059 0.89151 0.86218 1.19457 0.92873 0.93500 1.09734 1.19414 0.93130 0.90560 1.10951 1.24162 0.92094 1.11188 0.87950 1.86647 1.33642 1.83738 1.29976 0.95235 0.83400 0.74066 0.89175 1.21719 0.85000 0.95939 1.02797 1.41487 1.09588 1.02669 1.63712 1.18479 0.89265 0.85908 0.98741 1.66446 1.40511 0.95972 1.18613 1.22514 0.90073 0.94464 0.91688 1.20362 0.94773 0.93539 1.15484 1.17843 0.86738 0.83149 0.75984 1.90755 1.13492 1.87010 1.49526 1.45719 1.11176 1.05401 1.75690 1.21800 0.94125 0.80812 1.04142 1.22081 0.88476 0.95286 0.88059 1.92879 1.65793 1.95086 1.62623 1.23758 1.03199 0.95585 0.95858 1.22543 0.99522 0.94046 0.96613 0.87699 1.22141 0.87649 0.95962 0.93489 1.86491 1.33532 1.62857 1.55015 1.23551 0.99227 0.93071 1.02145 0.89611 0.88471 0.91445 0.90433 0.77407 1.18243 1.17705 0.79914 0.73505 0.82090 0.76110 0.89117 0.89911 0.89584 0.87926 0.93211 0.93155 0.77081 0.87593 0.89157 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.34 8.68 36.01 0.31 -0.03 16 2 C 0.09 0.31 5.98 -103.67 -0.62 -0.31 16 3 C -0.15 -0.51 6.16 -105.13 -0.65 -1.15 16 4 C -0.13 -0.19 5.61 -102.73 -0.58 -0.77 16 5 C -0.04 0.01 2.05 36.00 0.07 0.08 16 6 O -0.53 -0.56 12.86 -35.23 -0.45 -1.02 16 7 Si 0.68 -1.31 30.80 -169.99 -5.24 -6.54 16 8 C 0.07 -0.04 10.44 -16.70 -0.17 -0.21 16 9 N -0.57 -0.06 6.04 -12.12 -0.07 -0.13 16 10 C 0.31 0.97 8.42 -155.71 -1.31 -0.34 16 11 N -0.50 -1.71 10.37 -11.96 -0.12 -1.84 16 12 C 0.18 0.34 10.67 -17.11 -0.18 0.16 16 13 C -0.23 -0.68 5.89 -104.82 -0.62 -1.29 16 14 C 0.57 1.64 7.72 -12.41 -0.10 1.54 16 15 O -0.53 -2.82 13.50 5.30 0.07 -2.74 16 16 N -0.73 -0.20 5.41 -61.31 -0.33 -0.53 16 17 C 0.12 -0.07 5.41 -4.04 -0.02 -0.10 16 18 C 0.08 -0.09 1.71 -89.81 -0.15 -0.25 16 19 F -0.18 -0.20 16.64 2.25 0.04 -0.16 16 20 C -0.15 0.21 7.10 -25.82 -0.18 0.03 16 21 C -0.11 0.12 3.98 -89.72 -0.36 -0.23 16 22 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 23 C 0.09 -0.14 6.89 37.16 0.26 0.12 16 24 O -0.57 -0.10 13.66 -35.23 -0.48 -0.58 16 25 C -0.14 0.33 7.10 -25.92 -0.18 0.14 16 26 H 0.09 0.30 8.14 -51.93 -0.42 -0.12 16 27 H 0.10 0.36 5.97 -51.93 -0.31 0.05 16 28 H 0.07 0.09 5.05 -51.93 -0.26 -0.17 16 29 H 0.08 -0.10 6.05 -51.93 -0.31 -0.41 16 30 H 0.38 -1.09 8.74 45.56 0.40 -0.69 16 31 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 32 H -0.25 -0.10 7.04 56.52 0.40 0.30 16 33 H 0.18 -0.67 6.31 -52.49 -0.33 -1.00 16 34 H 0.43 -1.12 8.96 -40.82 -0.37 -1.49 16 35 H 0.16 -0.21 6.43 -52.49 -0.34 -0.55 16 36 H 0.40 -0.50 6.15 -40.82 -0.25 -0.75 16 37 H 0.09 -0.10 7.88 -51.93 -0.41 -0.51 16 38 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 39 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 40 H 0.10 -0.24 7.68 -51.93 -0.40 -0.64 16 41 H 0.05 -0.14 7.86 -51.92 -0.41 -0.54 16 42 H 0.05 -0.12 8.14 -51.93 -0.42 -0.55 16 43 H 0.38 -1.51 9.12 45.56 0.42 -1.09 16 44 H 0.11 -0.41 8.06 -51.93 -0.42 -0.83 16 45 H 0.09 -0.19 8.14 -51.93 -0.42 -0.62 16 LS Contribution 370.33 15.07 5.58 5.58 Total: 0.00 -11.00 370.33 -10.22 -21.22 By element: Atomic # 1 Polarization: -5.91 SS G_CDS: -4.73 Total: -10.64 kcal Atomic # 6 Polarization: 1.88 SS G_CDS: -4.48 Total: -2.61 kcal Atomic # 7 Polarization: -1.97 SS G_CDS: -0.53 Total: -2.50 kcal Atomic # 8 Polarization: -3.48 SS G_CDS: -0.86 Total: -4.34 kcal Atomic # 9 Polarization: -0.20 SS G_CDS: 0.04 Total: -0.16 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.24 Total: -6.54 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -11.00 -10.22 -21.22 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12890568.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.574 kcal (2) G-P(sol) polarization free energy of solvation -10.995 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.569 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.220 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.216 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.789 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds