Wall clock time and date at job start Sun Mar 7 2021 08:57:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50711 * 1 3 3 C 1.39282 * 121.02876 * 2 1 4 4 C 1.46497 * 134.19812 * 0.73042 * 3 2 1 5 5 C 1.50697 * 126.59680 * 359.23537 * 4 3 2 6 6 O 1.42905 * 109.47182 * 75.28596 * 5 4 3 7 7 Si 1.86295 * 109.47214 * 195.28634 * 5 4 3 8 8 C 1.34177 * 106.80341 * 179.49993 * 4 3 2 9 9 N 1.36946 * 109.95032 * 359.75801 * 8 4 3 10 10 C 1.37157 * 110.11616 * 0.02562 * 9 8 4 11 11 N 1.32818 * 132.96646 * 180.02562 * 10 9 8 12 12 C 1.31318 * 121.88958 * 179.97438 * 11 10 9 13 13 C 1.39746 * 121.02918 * 180.27384 * 2 1 3 14 14 C 1.47665 * 120.45570 * 359.97438 * 13 2 1 15 15 O 1.21570 * 120.00267 * 353.98025 * 14 13 2 16 16 N 1.34776 * 119.99821 * 173.98264 * 14 13 2 17 17 C 1.46504 * 120.00214 * 180.02562 * 16 14 13 18 18 C 1.52994 * 109.47393 * 179.97438 * 17 16 14 19 19 F 1.39898 * 112.85189 * 314.66788 * 18 17 16 20 20 C 1.53785 * 113.61294 * 85.86047 * 18 17 16 21 21 C 1.53956 * 87.01795 * 139.95197 * 20 18 17 22 22 H 1.09004 * 113.53954 * 89.19329 * 21 20 18 23 23 C 1.53000 * 113.74444 * 220.05382 * 21 20 18 24 24 O 1.42900 * 109.47251 * 272.60039 * 23 21 20 25 25 C 1.53778 * 87.11173 * 334.63601 * 21 20 18 26 26 H 1.08994 * 109.47163 * 263.30788 * 1 2 3 27 27 H 1.09002 * 109.46996 * 143.30812 * 1 2 3 28 28 H 1.09000 * 109.46685 * 23.31093 * 1 2 3 29 29 H 1.09002 * 109.47383 * 315.29093 * 5 4 3 30 30 H 0.96703 * 114.00079 * 179.97438 * 6 5 4 31 31 H 1.48503 * 110.00121 * 178.68280 * 7 5 4 32 32 H 1.48497 * 110.00105 * 300.00135 * 7 5 4 33 33 H 1.08002 * 125.02353 * 179.76124 * 8 4 3 34 34 H 0.96996 * 124.94093 * 179.97438 * 9 8 4 35 35 H 1.07997 * 119.30923 * 179.97438 * 12 11 10 36 36 H 0.97002 * 120.00606 * 359.97438 * 16 14 13 37 37 H 1.09001 * 109.46835 * 299.99727 * 17 16 14 38 38 H 1.08994 * 109.47264 * 59.99435 * 17 16 14 39 39 H 1.09000 * 113.61455 * 254.52408 * 20 18 17 40 40 H 1.08997 * 113.61607 * 25.43440 * 20 18 17 41 41 H 1.09008 * 109.46995 * 32.59992 * 23 21 20 42 42 H 1.08999 * 109.47297 * 152.59475 * 23 21 20 43 43 H 0.96702 * 113.99745 * 179.97438 * 24 23 21 44 44 H 1.08998 * 113.61465 * 270.81025 * 25 21 20 45 45 H 1.09005 * 113.61086 * 139.91246 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2251 1.1935 0.0000 4 6 1.8516 2.6100 0.0134 5 6 0.4526 3.1703 0.0162 6 8 -0.1194 3.0168 1.3167 7 14 0.5070 4.9785 -0.4287 8 6 2.9947 3.3126 0.0167 9 7 4.0668 2.4605 0.0120 10 6 3.6348 1.1588 0.0048 11 7 4.2721 -0.0065 -0.0012 12 6 3.6267 -1.1501 -0.0072 13 6 2.2275 -1.1975 -0.0057 14 6 1.5225 -2.4950 -0.0114 15 8 0.3124 -2.5298 0.0994 16 7 2.2208 -3.6407 -0.1392 17 6 1.5214 -4.9280 -0.1454 18 6 2.5383 -6.0602 -0.3026 19 9 3.4865 -5.8042 -1.2989 20 6 3.1532 -6.5251 1.0281 21 6 3.0444 -7.9612 0.4840 22 1 3.9225 -8.2822 -0.0764 23 6 2.6012 -8.9849 1.5312 24 8 3.7466 -9.4809 2.2270 25 6 1.8972 -7.4541 -0.4058 26 1 -0.3633 -0.1198 1.0206 27 1 -0.3633 -0.8241 -0.6141 28 1 -0.3633 0.9438 -0.4067 29 1 -0.1548 2.6347 -0.7133 30 1 -1.0215 3.3568 1.3923 31 1 -0.8693 5.5354 -0.4605 32 1 1.3322 5.7199 0.5585 33 1 3.0597 4.3906 0.0224 34 1 4.9965 2.7374 0.0128 35 1 4.1871 -2.0734 -0.0124 36 1 3.1863 -3.6130 -0.2279 37 1 0.9810 -5.0523 0.7930 38 1 0.8169 -4.9548 -0.9766 39 1 4.1798 -6.1898 1.1755 40 1 2.5169 -6.3364 1.8926 41 1 1.9233 -8.5093 2.2401 42 1 2.0897 -9.8113 1.0378 43 1 3.5400 -10.1356 2.9080 44 1 0.9169 -7.5199 0.0661 45 1 1.9113 -7.8677 -1.4142 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_12890568.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:45 Heat of formation + Delta-G solvation = -62.291200 kcal Electronic energy + Delta-G solvation = -30736.240350 eV Core-core repulsion = 26250.368881 eV Total energy + Delta-G solvation = -4485.871469 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.147 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -48.86136 -42.87308 -41.01117 -39.81068 -38.75409 -37.83585 -37.19901 -35.91275 -34.98020 -32.13065 -31.63698 -29.92850 -28.92236 -27.25912 -26.95821 -26.29377 -24.62668 -23.93773 -22.20649 -21.92218 -20.69592 -20.37622 -19.28035 -18.93980 -18.48818 -18.26754 -17.82109 -17.32743 -16.99302 -16.84282 -16.51681 -16.42525 -16.27958 -15.84737 -15.73482 -15.48213 -15.15604 -14.99737 -14.79632 -14.70197 -14.45492 -14.10431 -13.97140 -13.78694 -13.69951 -13.58597 -13.37927 -13.30170 -13.18029 -13.06378 -12.64674 -12.34124 -11.98044 -11.86847 -11.49935 -11.32432 -11.22997 -11.16235 -10.80855 -10.51049 -10.26125 -10.23901 -9.65910 -9.14508 -4.85202 -0.37567 -0.11394 1.32595 1.38032 1.60561 1.69572 1.74460 1.94091 2.00363 2.71416 3.05082 3.13083 3.15869 3.29006 3.36891 3.37346 3.53985 3.57261 3.64721 3.71262 3.77311 3.83616 4.10996 4.16583 4.25475 4.30220 4.30768 4.37260 4.47078 4.56510 4.59181 4.62185 4.65282 4.70458 4.73152 4.78475 4.86200 4.92232 4.96949 5.00421 5.14217 5.21638 5.25374 5.37827 5.41484 5.70551 6.18956 6.33663 6.67094 6.79578 6.89189 7.05891 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C 0.065 3.935 3 C -0.167 4.167 4 C -0.159 4.159 5 C -0.061 4.061 6 O -0.558 6.558 7 Si 0.776 3.224 8 C 0.088 3.912 9 N -0.560 5.560 10 C 0.289 3.711 11 N -0.516 5.516 12 C 0.179 3.821 13 C -0.242 4.242 14 C 0.574 3.426 15 O -0.560 6.560 16 N -0.716 5.716 17 C 0.116 3.884 18 C 0.079 3.921 19 F -0.198 7.198 20 C -0.143 4.143 21 C -0.114 4.114 22 H 0.085 0.915 23 C 0.083 3.917 24 O -0.599 6.599 25 C -0.133 4.133 26 H 0.073 0.927 27 H 0.085 0.915 28 H 0.078 0.922 29 H 0.083 0.917 30 H 0.392 0.608 31 H -0.290 1.290 32 H -0.278 1.278 33 H 0.217 0.783 34 H 0.439 0.561 35 H 0.188 0.812 36 H 0.410 0.590 37 H 0.099 0.901 38 H 0.078 0.922 39 H 0.077 0.923 40 H 0.115 0.885 41 H 0.064 0.936 42 H 0.059 0.941 43 H 0.397 0.603 44 H 0.127 0.873 45 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.480 0.866 -1.242 1.589 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C 0.057 3.943 3 C -0.174 4.174 4 C -0.166 4.166 5 C -0.168 4.168 6 O -0.367 6.367 7 Si 0.678 3.322 8 C -0.039 4.039 9 N -0.166 5.166 10 C 0.055 3.945 11 N -0.230 5.230 12 C 0.010 3.990 13 C -0.250 4.250 14 C 0.363 3.637 15 O -0.440 6.440 16 N -0.369 5.369 17 C -0.008 4.008 18 C 0.061 3.939 19 F -0.178 7.178 20 C -0.181 4.181 21 C -0.133 4.133 22 H 0.103 0.897 23 C 0.006 3.994 24 O -0.408 6.408 25 C -0.170 4.170 26 H 0.092 0.908 27 H 0.104 0.896 28 H 0.097 0.903 29 H 0.100 0.900 30 H 0.242 0.758 31 H -0.216 1.216 32 H -0.205 1.205 33 H 0.234 0.766 34 H 0.280 0.720 35 H 0.205 0.795 36 H 0.248 0.752 37 H 0.117 0.883 38 H 0.097 0.903 39 H 0.096 0.904 40 H 0.133 0.867 41 H 0.083 0.917 42 H 0.077 0.923 43 H 0.247 0.753 44 H 0.145 0.855 45 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 0.431 1.938 -1.226 2.333 hybrid contribution -0.925 -0.782 1.074 1.618 sum -0.494 1.156 -0.152 1.266 Atomic orbital electron populations 1.21024 0.88900 1.03583 1.03238 1.20078 0.97373 0.89843 0.87046 1.19765 0.93317 0.94439 1.09871 1.19720 0.94550 0.89927 1.12393 1.24534 0.91461 1.13263 0.87569 1.86601 1.34890 1.84396 1.30825 0.94151 0.80406 0.70475 0.87158 1.22247 0.84139 0.97121 1.00389 1.41571 1.10552 1.01728 1.62777 1.18762 0.89560 0.86787 0.99388 1.66503 1.40879 0.96445 1.19130 1.22905 0.89906 0.95137 0.91019 1.20465 0.95305 0.93442 1.15754 1.17889 0.86401 0.83689 0.75736 1.90736 1.14653 1.87428 1.51190 1.45667 1.11553 1.05190 1.74487 1.21883 0.94187 0.80333 1.04419 1.22165 0.88210 0.95652 0.87921 1.92849 1.66441 1.95226 1.63329 1.23776 1.02955 0.95318 0.96028 1.22519 0.99341 0.94410 0.96983 0.89652 1.22235 0.87379 0.96195 0.93615 1.86444 1.34839 1.63647 1.55853 1.23565 0.99731 0.91642 1.02111 0.90836 0.89607 0.90316 0.89954 0.75820 1.21632 1.20456 0.76634 0.71996 0.79535 0.75222 0.88260 0.90345 0.90441 0.86665 0.91736 0.92273 0.75318 0.85529 0.89241 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.84 8.68 71.24 0.62 -0.23 16 2 C 0.07 0.58 5.98 -19.24 -0.12 0.46 16 3 C -0.17 -1.30 6.16 -20.19 -0.12 -1.42 16 4 C -0.16 -0.46 5.61 -18.64 -0.10 -0.56 16 5 C -0.06 0.02 2.05 71.24 0.15 0.17 16 6 O -0.56 -1.48 12.86 -148.98 -1.92 -3.40 16 7 Si 0.78 -3.70 30.80 68.60 2.11 -1.58 16 8 C 0.09 -0.18 10.44 82.97 0.87 0.69 16 9 N -0.56 0.17 6.04 -192.25 -1.16 -0.99 16 10 C 0.29 1.94 8.42 134.02 1.13 3.07 16 11 N -0.52 -3.82 10.37 -191.74 -1.99 -5.81 16 12 C 0.18 0.82 10.67 85.20 0.91 1.73 16 13 C -0.24 -1.73 5.89 -19.99 -0.12 -1.85 16 14 C 0.57 3.99 7.72 86.73 0.67 4.66 16 15 O -0.56 -6.88 13.50 -3.94 -0.05 -6.93 16 16 N -0.72 -0.82 5.41 -466.16 -2.52 -3.34 16 17 C 0.12 -0.13 5.41 86.38 0.47 0.34 16 18 C 0.08 -0.18 1.71 -10.27 -0.02 -0.19 16 19 F -0.20 -0.55 16.64 44.97 0.75 0.20 16 20 C -0.14 0.42 7.10 31.18 0.22 0.64 16 21 C -0.11 0.25 3.98 -10.21 -0.04 0.21 16 22 H 0.09 0.15 8.14 -2.38 -0.02 0.13 16 23 C 0.08 -0.31 6.89 71.98 0.50 0.19 16 24 O -0.60 -0.20 13.66 -148.98 -2.04 -2.24 16 25 C -0.13 0.66 7.10 31.12 0.22 0.89 16 26 H 0.07 0.69 8.14 -2.39 -0.02 0.68 16 27 H 0.09 0.83 5.97 -2.39 -0.01 0.82 16 28 H 0.08 0.33 5.05 -2.39 -0.01 0.32 16 29 H 0.08 -0.18 6.05 -2.39 -0.01 -0.19 16 30 H 0.39 -2.04 8.74 -74.06 -0.65 -2.69 16 31 H -0.29 -0.13 7.11 99.48 0.71 0.58 16 32 H -0.28 0.14 7.04 99.48 0.70 0.84 16 33 H 0.22 -2.07 6.31 -2.91 -0.02 -2.08 16 34 H 0.44 -2.67 8.96 -92.71 -0.83 -3.50 16 35 H 0.19 -0.45 6.43 -2.91 -0.02 -0.47 16 36 H 0.41 -0.87 6.15 -92.71 -0.57 -1.44 16 37 H 0.10 -0.25 7.88 -2.39 -0.02 -0.27 16 38 H 0.08 0.02 8.14 -2.39 -0.02 0.00 16 39 H 0.08 -0.08 8.14 -2.39 -0.02 -0.10 16 40 H 0.12 -0.63 7.68 -2.39 -0.02 -0.65 16 41 H 0.06 -0.43 7.86 -2.38 -0.02 -0.45 16 42 H 0.06 -0.33 8.14 -2.39 -0.02 -0.35 16 43 H 0.40 -3.18 9.12 -74.06 -0.68 -3.86 16 44 H 0.13 -1.16 8.06 -2.39 -0.02 -1.18 16 45 H 0.09 -0.40 8.14 -2.38 -0.02 -0.42 16 Total: 0.00 -26.43 370.33 -3.17 -29.60 By element: Atomic # 1 Polarization: -12.71 SS G_CDS: -1.59 Total: -14.29 kcal Atomic # 6 Polarization: 3.56 SS G_CDS: 5.22 Total: 8.78 kcal Atomic # 7 Polarization: -4.47 SS G_CDS: -5.67 Total: -10.14 kcal Atomic # 8 Polarization: -8.56 SS G_CDS: -4.00 Total: -12.57 kcal Atomic # 9 Polarization: -0.55 SS G_CDS: 0.75 Total: 0.20 kcal Atomic # 14 Polarization: -3.70 SS G_CDS: 2.11 Total: -1.58 kcal Total: -26.43 -3.17 -29.60 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_12890568.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.689 kcal (2) G-P(sol) polarization free energy of solvation -26.429 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.117 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.174 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.603 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.291 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds