Wall clock time and date at job start Sun Mar 7 2021 08:57:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47586 * 2 1 4 4 C 1.50711 * 109.46944 * 119.99897 * 2 1 3 5 5 C 1.38333 * 119.86918 * 64.99970 * 4 2 1 6 6 C 1.37999 * 120.12716 * 180.02562 * 5 4 2 7 7 C 1.39402 * 119.86742 * 359.97438 * 6 5 4 8 8 C 1.48287 * 120.12616 * 179.97438 * 7 6 5 9 9 C 1.39496 * 119.97640 * 180.02562 * 8 7 6 10 10 C 1.37668 * 120.02328 * 179.97438 * 9 8 7 11 11 C 1.39701 * 119.97508 * 0.02562 * 10 9 8 12 12 C 1.47720 * 120.02248 * 179.97438 * 11 10 9 13 13 O 1.21570 * 120.00367 * 0.02562 * 12 11 10 14 14 N 1.34777 * 119.99660 * 180.02562 * 12 11 10 15 15 C 1.46508 * 120.00013 * 180.02562 * 14 12 11 16 16 C 1.52991 * 109.47429 * 180.02562 * 15 14 12 17 17 F 1.39903 * 112.90697 * 316.24981 * 16 15 14 18 18 C 1.53781 * 113.61611 * 87.50116 * 16 15 14 19 19 C 1.54049 * 87.08031 * 139.97702 * 18 16 15 20 20 H 1.09000 * 113.61076 * 89.06984 * 19 18 16 21 21 C 1.52990 * 113.70090 * 220.05426 * 19 18 16 22 22 O 1.42903 * 109.47168 * 272.42623 * 21 19 18 23 23 C 1.53781 * 113.61529 * 184.99923 * 16 15 14 24 24 C 1.39705 * 119.95459 * 0.28035 * 11 10 9 25 25 C 1.37667 * 119.97043 * 359.44101 * 24 11 10 26 26 C 1.39402 * 119.75148 * 0.25599 * 7 6 5 27 27 C 1.38010 * 119.86632 * 359.51169 * 26 7 6 28 28 H 0.96694 * 113.99672 * 300.00743 * 1 2 3 29 29 H 1.08999 * 109.47144 * 239.99785 * 2 1 3 30 30 H 1.48502 * 109.99948 * 299.99657 * 3 2 1 31 31 H 1.48504 * 109.99882 * 61.31673 * 3 2 1 32 32 H 1.08001 * 119.93799 * 0.02562 * 5 4 2 33 33 H 1.07992 * 120.06872 * 179.97438 * 6 5 4 34 34 H 1.08003 * 119.99074 * 0.02562 * 9 8 7 35 35 H 1.08005 * 120.00855 * 180.02562 * 10 9 8 36 36 H 0.96996 * 120.00851 * 0.02562 * 14 12 11 37 37 H 1.08997 * 109.46666 * 59.99730 * 15 14 12 38 38 H 1.09002 * 109.46731 * 300.00370 * 15 14 12 39 39 H 1.09005 * 113.61471 * 254.53285 * 18 16 15 40 40 H 1.09003 * 113.61469 * 25.43063 * 18 16 15 41 41 H 1.09007 * 109.47036 * 32.41747 * 21 19 18 42 42 H 1.08994 * 109.47734 * 152.42153 * 21 19 18 43 43 H 0.96700 * 114.00200 * 179.97438 * 22 21 19 44 44 H 1.09002 * 113.61445 * 334.56787 * 23 16 15 45 45 H 1.09002 * 113.61408 * 105.38518 * 23 16 15 46 46 H 1.07992 * 120.01638 * 179.70255 * 24 11 10 47 47 H 1.07998 * 119.98819 * 180.30039 * 25 24 11 48 48 H 1.08000 * 120.06829 * 179.74990 * 26 7 6 49 49 H 1.07995 * 119.93358 * 180.23157 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.6829 -2.0612 1.3959 6 6 2.1400 -2.7169 2.5208 7 6 2.8536 -2.0155 3.4914 8 6 3.3469 -2.7142 4.7027 9 6 4.0602 -2.0091 5.6722 10 6 4.5181 -2.6567 6.7974 11 6 4.2687 -4.0207 6.9678 12 6 4.7601 -4.7168 8.1745 13 8 5.3814 -4.1027 9.0200 14 7 4.5196 -6.0328 8.3382 15 6 5.0064 -6.7231 9.5352 16 6 4.6025 -8.1975 9.4735 17 9 3.2815 -8.3830 9.0517 18 6 5.6165 -9.0834 8.7307 19 6 5.3632 -10.1470 9.8159 20 1 4.5415 -10.8236 9.5807 21 6 6.6284 -10.8803 10.2654 22 8 6.8551 -12.0051 9.4136 23 6 4.9606 -8.9880 10.7430 24 6 3.5597 -4.7273 5.9932 25 6 3.0978 -4.0764 4.8716 26 6 3.0967 -0.6533 3.3217 27 6 2.6389 -0.0092 2.1903 28 1 -0.3932 0.4418 0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 1.5617 2.4678 -1.2085 31 1 1.5880 2.4585 1.2242 32 1 1.1303 -2.6037 0.6430 33 1 1.9452 -3.7714 2.6491 34 1 4.2526 -0.9545 5.5404 35 1 5.0701 -2.1105 7.5481 36 1 4.0242 -6.5230 7.6635 37 1 4.5705 -6.2634 10.4222 38 1 6.0927 -6.6460 9.5826 39 1 5.2862 -9.3861 7.7369 40 1 6.6313 -8.6857 8.7376 41 1 7.4807 -10.2033 10.2076 42 1 6.5048 -11.2219 11.2930 43 1 7.6431 -12.5178 9.6404 44 1 5.7961 -8.5641 11.3002 45 1 4.1011 -9.2124 11.3746 46 1 3.3705 -5.7827 6.1217 47 1 2.5455 -4.6213 4.1203 48 1 3.6455 -0.1040 4.0723 49 1 2.8299 1.0452 2.0560 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_13158362.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:50 Heat of formation + Delta-G solvation = -83.688080 kcal Electronic energy + Delta-G solvation = -31755.873627 eV Core-core repulsion = 27143.473861 eV Total energy + Delta-G solvation = -4612.399767 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -48.91039 -41.43572 -40.72169 -39.97157 -39.20588 -37.65974 -37.28540 -35.68570 -34.09482 -32.68638 -31.69754 -31.25184 -30.03673 -27.63052 -27.18695 -26.60763 -24.74009 -24.34481 -22.72263 -22.45933 -22.16459 -21.34474 -20.77512 -19.44480 -18.61071 -18.39819 -17.84596 -17.56541 -17.06500 -16.94739 -16.65457 -16.61688 -16.33917 -16.09025 -16.00690 -15.95263 -15.55315 -15.40064 -15.13681 -15.01508 -14.96911 -14.77458 -14.50960 -14.24936 -14.14691 -14.09281 -13.84950 -13.59379 -13.52537 -13.33795 -13.17010 -12.81091 -12.63899 -12.48478 -12.07290 -12.02526 -11.98166 -11.62817 -11.57401 -11.45447 -11.02537 -10.93653 -10.78864 -10.61759 -10.22349 -10.11648 -10.03237 -9.12677 -5.00079 -0.71814 0.28814 0.32775 0.47745 1.23607 1.55001 1.82659 1.92615 1.94848 2.57277 2.86930 2.95774 2.97865 3.03588 3.20178 3.30383 3.37689 3.40627 3.52667 3.61438 3.64187 3.74626 3.79006 3.90233 3.94980 4.11875 4.17848 4.19322 4.20814 4.28025 4.31204 4.38824 4.41240 4.47379 4.48973 4.52499 4.56649 4.63070 4.69496 4.77918 4.80274 4.82304 4.84838 4.98030 5.07824 5.13702 5.17209 5.22878 5.28583 5.35120 5.42311 5.58906 5.74217 5.84704 6.34926 6.35305 6.57330 7.11871 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.686 3.314 4 C -0.112 4.112 5 C -0.090 4.090 6 C -0.105 4.105 7 C -0.049 4.049 8 C -0.017 4.017 9 C -0.118 4.118 10 C -0.053 4.053 11 C -0.137 4.137 12 C 0.561 3.439 13 O -0.533 6.533 14 N -0.725 5.725 15 C 0.114 3.886 16 C 0.079 3.921 17 F -0.184 7.184 18 C -0.146 4.146 19 C -0.109 4.109 20 H 0.105 0.895 21 C 0.085 3.915 22 O -0.573 6.573 23 C -0.142 4.142 24 C -0.081 4.081 25 C -0.118 4.118 26 C -0.100 4.100 27 C -0.116 4.116 28 H 0.376 0.624 29 H 0.119 0.881 30 H -0.257 1.257 31 H -0.260 1.260 32 H 0.129 0.871 33 H 0.129 0.871 34 H 0.135 0.865 35 H 0.140 0.860 36 H 0.404 0.596 37 H 0.083 0.917 38 H 0.091 0.909 39 H 0.085 0.915 40 H 0.103 0.897 41 H 0.050 0.950 42 H 0.051 0.949 43 H 0.382 0.618 44 H 0.106 0.894 45 H 0.090 0.910 46 H 0.128 0.872 47 H 0.134 0.866 48 H 0.132 0.868 49 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.146 -1.859 0.204 3.660 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.186 4.186 3 Si 0.587 3.413 4 C -0.112 4.112 5 C -0.108 4.108 6 C -0.122 4.122 7 C -0.049 4.049 8 C -0.017 4.017 9 C -0.136 4.136 10 C -0.072 4.072 11 C -0.140 4.140 12 C 0.349 3.651 13 O -0.411 6.411 14 N -0.378 5.378 15 C -0.011 4.011 16 C 0.061 3.939 17 F -0.164 7.164 18 C -0.184 4.184 19 C -0.127 4.127 20 H 0.123 0.877 21 C 0.008 3.992 22 O -0.379 6.379 23 C -0.180 4.180 24 C -0.099 4.099 25 C -0.136 4.136 26 C -0.118 4.118 27 C -0.133 4.133 28 H 0.224 0.776 29 H 0.137 0.863 30 H -0.182 1.182 31 H -0.185 1.185 32 H 0.147 0.853 33 H 0.147 0.853 34 H 0.153 0.847 35 H 0.158 0.842 36 H 0.241 0.759 37 H 0.101 0.899 38 H 0.109 0.891 39 H 0.104 0.896 40 H 0.121 0.879 41 H 0.068 0.932 42 H 0.069 0.931 43 H 0.230 0.770 44 H 0.124 0.876 45 H 0.109 0.891 46 H 0.146 0.854 47 H 0.151 0.849 48 H 0.149 0.851 49 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 2.891 -0.682 -0.014 2.970 hybrid contribution -0.983 -0.755 0.519 1.344 sum 1.908 -1.437 0.506 2.441 Atomic orbital electron populations 1.86610 1.17609 1.79965 1.49337 1.25055 0.84036 1.11069 0.98460 0.94952 0.91653 0.74461 0.80222 1.20391 0.99193 0.94945 0.96683 1.20980 0.98565 0.93724 0.97532 1.21320 0.97294 1.00154 0.93477 1.18825 0.98765 0.93484 0.93797 1.18998 0.96150 0.93299 0.93243 1.21244 0.98390 1.00493 0.93481 1.21221 0.96192 0.92859 0.96919 1.19918 1.03346 0.95098 0.95608 1.18258 0.79297 0.81425 0.86096 1.90805 1.40405 1.65976 1.43907 1.45743 1.58488 1.09674 1.23919 1.21830 1.00956 0.89214 0.89053 1.22080 0.79082 0.94438 0.98332 1.92875 1.36347 1.96225 1.90978 1.23781 0.99443 0.95376 0.99771 1.22557 0.98602 0.95296 0.96262 0.87668 1.22135 0.96202 0.87775 0.93116 1.86488 1.50614 1.42782 1.58023 1.23557 1.03412 0.95171 0.95868 1.21217 0.95918 0.99633 0.93168 1.21167 1.00590 0.93739 0.98061 1.21225 0.99428 0.93553 0.97601 1.21009 0.98526 0.99779 0.94033 0.77612 0.86302 1.18164 1.18498 0.85278 0.85272 0.84708 0.84190 0.75943 0.89868 0.89069 0.89635 0.87899 0.93186 0.93114 0.77049 0.87558 0.89141 0.85400 0.84857 0.85055 0.85237 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.52 12.83 -35.23 -0.45 -0.97 16 2 C -0.08 0.04 2.80 36.01 0.10 0.15 16 3 Si 0.69 -0.84 29.87 -169.99 -5.08 -5.92 16 4 C -0.11 0.03 5.36 -104.55 -0.56 -0.53 16 5 C -0.09 0.01 9.67 -39.63 -0.38 -0.38 16 6 C -0.10 0.03 9.43 -39.24 -0.37 -0.34 16 7 C -0.05 -0.01 5.88 -104.90 -0.62 -0.62 16 8 C -0.02 0.00 5.88 -104.82 -0.62 -0.62 16 9 C -0.12 -0.01 9.41 -39.32 -0.37 -0.38 16 10 C -0.05 -0.07 9.58 -39.24 -0.38 -0.44 16 11 C -0.14 -0.19 5.88 -104.93 -0.62 -0.80 16 12 C 0.56 1.49 7.77 -12.39 -0.10 1.40 16 13 O -0.53 -3.20 16.33 5.30 0.09 -3.12 16 14 N -0.73 -0.15 5.40 -61.29 -0.33 -0.48 16 15 C 0.11 -0.07 5.43 -4.04 -0.02 -0.09 16 16 C 0.08 -0.10 1.74 -89.81 -0.16 -0.26 16 17 F -0.18 -0.17 16.58 2.25 0.04 -0.13 16 18 C -0.15 0.25 7.09 -25.78 -0.18 0.06 16 19 C -0.11 0.14 4.00 -89.67 -0.36 -0.21 16 20 H 0.11 0.01 8.14 -51.93 -0.42 -0.41 16 21 C 0.09 -0.15 6.89 37.15 0.26 0.10 16 22 O -0.57 0.04 13.66 -35.23 -0.48 -0.44 16 23 C -0.14 0.34 7.09 -25.92 -0.18 0.16 16 24 C -0.08 0.04 9.52 -39.24 -0.37 -0.33 16 25 C -0.12 0.06 9.41 -39.32 -0.37 -0.30 16 26 C -0.10 0.06 9.43 -39.23 -0.37 -0.31 16 27 C -0.12 0.09 8.65 -39.63 -0.34 -0.25 16 28 H 0.38 -0.65 8.70 45.56 0.40 -0.25 16 29 H 0.12 -0.16 7.96 -51.93 -0.41 -0.57 16 30 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 31 H -0.26 -0.17 7.00 56.52 0.40 0.23 16 32 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 33 H 0.13 -0.27 6.19 -52.49 -0.33 -0.59 16 34 H 0.14 -0.26 6.19 -52.48 -0.32 -0.59 16 35 H 0.14 0.17 7.64 -52.48 -0.40 -0.23 16 36 H 0.40 -0.58 6.05 -40.82 -0.25 -0.83 16 37 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 38 H 0.09 -0.10 7.84 -51.93 -0.41 -0.51 16 39 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 40 H 0.10 -0.27 7.66 -51.93 -0.40 -0.67 16 41 H 0.05 -0.15 7.85 -51.93 -0.41 -0.56 16 42 H 0.05 -0.13 8.14 -51.93 -0.42 -0.56 16 43 H 0.38 -1.60 9.12 45.56 0.42 -1.19 16 44 H 0.11 -0.42 8.06 -51.93 -0.42 -0.84 16 45 H 0.09 -0.20 8.14 -51.93 -0.42 -0.63 16 46 H 0.13 -0.36 6.39 -52.49 -0.34 -0.69 16 47 H 0.13 -0.33 6.19 -52.49 -0.32 -0.66 16 48 H 0.13 -0.31 6.19 -52.49 -0.33 -0.64 16 49 H 0.13 -0.30 4.82 -52.49 -0.25 -0.55 16 LS Contribution 405.28 15.07 6.11 6.11 Total: 0.00 -9.67 405.28 -11.63 -21.29 By element: Atomic # 1 Polarization: -6.83 SS G_CDS: -5.51 Total: -12.34 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -6.01 Total: -4.01 kcal Atomic # 7 Polarization: -0.15 SS G_CDS: -0.33 Total: -0.48 kcal Atomic # 8 Polarization: -3.68 SS G_CDS: -0.85 Total: -4.53 kcal Atomic # 9 Polarization: -0.17 SS G_CDS: 0.04 Total: -0.13 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.08 Total: -5.92 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -9.67 -11.63 -21.29 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13158362.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.397 kcal (2) G-P(sol) polarization free energy of solvation -9.665 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.062 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.626 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.291 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.688 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds