Wall clock time and date at job start Sun Mar 7 2021 08:57:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47586 * 2 1 4 4 C 1.50711 * 109.46944 * 119.99897 * 2 1 3 5 5 C 1.38333 * 119.86918 * 64.99970 * 4 2 1 6 6 C 1.37999 * 120.12716 * 180.02562 * 5 4 2 7 7 C 1.39402 * 119.86742 * 359.97438 * 6 5 4 8 8 C 1.48287 * 120.12616 * 179.97438 * 7 6 5 9 9 C 1.39496 * 119.97640 * 180.02562 * 8 7 6 10 10 C 1.37668 * 120.02328 * 179.97438 * 9 8 7 11 11 C 1.39701 * 119.97508 * 0.02562 * 10 9 8 12 12 C 1.47720 * 120.02248 * 179.97438 * 11 10 9 13 13 O 1.21570 * 120.00367 * 0.02562 * 12 11 10 14 14 N 1.34777 * 119.99660 * 180.02562 * 12 11 10 15 15 C 1.46508 * 120.00013 * 180.02562 * 14 12 11 16 16 C 1.52991 * 109.47429 * 180.02562 * 15 14 12 17 17 F 1.39903 * 112.90697 * 316.24981 * 16 15 14 18 18 C 1.53781 * 113.61611 * 87.50116 * 16 15 14 19 19 C 1.54049 * 87.08031 * 139.97702 * 18 16 15 20 20 H 1.09000 * 113.61076 * 89.06984 * 19 18 16 21 21 C 1.52990 * 113.70090 * 220.05426 * 19 18 16 22 22 O 1.42903 * 109.47168 * 272.42623 * 21 19 18 23 23 C 1.53781 * 113.61529 * 184.99923 * 16 15 14 24 24 C 1.39705 * 119.95459 * 0.28035 * 11 10 9 25 25 C 1.37667 * 119.97043 * 359.44101 * 24 11 10 26 26 C 1.39402 * 119.75148 * 0.25599 * 7 6 5 27 27 C 1.38010 * 119.86632 * 359.51169 * 26 7 6 28 28 H 0.96694 * 113.99672 * 300.00743 * 1 2 3 29 29 H 1.08999 * 109.47144 * 239.99785 * 2 1 3 30 30 H 1.48502 * 109.99948 * 299.99657 * 3 2 1 31 31 H 1.48504 * 109.99882 * 61.31673 * 3 2 1 32 32 H 1.08001 * 119.93799 * 0.02562 * 5 4 2 33 33 H 1.07992 * 120.06872 * 179.97438 * 6 5 4 34 34 H 1.08003 * 119.99074 * 0.02562 * 9 8 7 35 35 H 1.08005 * 120.00855 * 180.02562 * 10 9 8 36 36 H 0.96996 * 120.00851 * 0.02562 * 14 12 11 37 37 H 1.08997 * 109.46666 * 59.99730 * 15 14 12 38 38 H 1.09002 * 109.46731 * 300.00370 * 15 14 12 39 39 H 1.09005 * 113.61471 * 254.53285 * 18 16 15 40 40 H 1.09003 * 113.61469 * 25.43063 * 18 16 15 41 41 H 1.09007 * 109.47036 * 32.41747 * 21 19 18 42 42 H 1.08994 * 109.47734 * 152.42153 * 21 19 18 43 43 H 0.96700 * 114.00200 * 179.97438 * 22 21 19 44 44 H 1.09002 * 113.61445 * 334.56787 * 23 16 15 45 45 H 1.09002 * 113.61408 * 105.38518 * 23 16 15 46 46 H 1.07992 * 120.01638 * 179.70255 * 24 11 10 47 47 H 1.07998 * 119.98819 * 180.30039 * 25 24 11 48 48 H 1.08000 * 120.06829 * 179.74990 * 26 7 6 49 49 H 1.07995 * 119.93358 * 180.23157 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.6829 -2.0612 1.3959 6 6 2.1400 -2.7169 2.5208 7 6 2.8536 -2.0155 3.4914 8 6 3.3469 -2.7142 4.7027 9 6 4.0602 -2.0091 5.6722 10 6 4.5181 -2.6567 6.7974 11 6 4.2687 -4.0207 6.9678 12 6 4.7601 -4.7168 8.1745 13 8 5.3814 -4.1027 9.0200 14 7 4.5196 -6.0328 8.3382 15 6 5.0064 -6.7231 9.5352 16 6 4.6025 -8.1975 9.4735 17 9 3.2815 -8.3830 9.0517 18 6 5.6165 -9.0834 8.7307 19 6 5.3632 -10.1470 9.8159 20 1 4.5415 -10.8236 9.5807 21 6 6.6284 -10.8803 10.2654 22 8 6.8551 -12.0051 9.4136 23 6 4.9606 -8.9880 10.7430 24 6 3.5597 -4.7273 5.9932 25 6 3.0978 -4.0764 4.8716 26 6 3.0967 -0.6533 3.3217 27 6 2.6389 -0.0092 2.1903 28 1 -0.3932 0.4418 0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 1.5617 2.4678 -1.2085 31 1 1.5880 2.4585 1.2242 32 1 1.1303 -2.6037 0.6430 33 1 1.9452 -3.7714 2.6491 34 1 4.2526 -0.9545 5.5404 35 1 5.0701 -2.1105 7.5481 36 1 4.0242 -6.5230 7.6635 37 1 4.5705 -6.2634 10.4222 38 1 6.0927 -6.6460 9.5826 39 1 5.2862 -9.3861 7.7369 40 1 6.6313 -8.6857 8.7376 41 1 7.4807 -10.2033 10.2076 42 1 6.5048 -11.2219 11.2930 43 1 7.6431 -12.5178 9.6404 44 1 5.7961 -8.5641 11.3002 45 1 4.1011 -9.2124 11.3746 46 1 3.3705 -5.7827 6.1217 47 1 2.5455 -4.6213 4.1203 48 1 3.6455 -0.1040 4.0723 49 1 2.8299 1.0452 2.0560 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_13158362.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:48 Heat of formation + Delta-G solvation = -83.225314 kcal Electronic energy + Delta-G solvation = -31755.853560 eV Core-core repulsion = 27143.473861 eV Total energy + Delta-G solvation = -4612.379700 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -48.90836 -41.47035 -40.72325 -39.86354 -39.22602 -37.65520 -37.20203 -35.78487 -34.07232 -32.62585 -31.63899 -31.23692 -29.97763 -27.56598 -27.03759 -26.54574 -24.68081 -24.33292 -22.66430 -22.41376 -22.14374 -21.34949 -20.67468 -19.44417 -18.59238 -18.28259 -17.82951 -17.57777 -17.03005 -16.90713 -16.63538 -16.55735 -16.30659 -16.12135 -16.00524 -15.93987 -15.48675 -15.35347 -15.08975 -14.97956 -14.89587 -14.77948 -14.47537 -14.23795 -14.13322 -14.06279 -13.80074 -13.54555 -13.42373 -13.23583 -13.15782 -12.79479 -12.60491 -12.38244 -12.07250 -11.95538 -11.90387 -11.56130 -11.53029 -11.35607 -11.13504 -10.81798 -10.79300 -10.59680 -10.30212 -10.08547 -9.95571 -9.09477 -4.93098 -0.71293 0.32803 0.40291 0.48371 1.30007 1.58237 1.73642 1.91873 1.94758 2.58329 2.98819 3.02212 3.09477 3.12925 3.32533 3.37385 3.44769 3.51692 3.61521 3.65183 3.77806 3.81344 3.86040 4.00561 4.03805 4.23527 4.25083 4.26986 4.34703 4.36541 4.43378 4.53100 4.54545 4.59331 4.62233 4.63559 4.67823 4.70502 4.83284 4.88190 4.89290 4.91057 4.96727 5.07786 5.11753 5.16708 5.20144 5.25265 5.36737 5.40378 5.49539 5.64394 5.77584 5.92855 6.30120 6.46173 6.88269 7.00071 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.083 4.083 3 Si 0.765 3.235 4 C -0.115 4.115 5 C -0.101 4.101 6 C -0.108 4.108 7 C -0.060 4.060 8 C -0.021 4.021 9 C -0.121 4.121 10 C -0.067 4.067 11 C -0.153 4.153 12 C 0.559 3.441 13 O -0.575 6.575 14 N -0.715 5.715 15 C 0.113 3.887 16 C 0.079 3.921 17 F -0.198 7.198 18 C -0.142 4.142 19 C -0.114 4.114 20 H 0.086 0.914 21 C 0.083 3.917 22 O -0.599 6.599 23 C -0.134 4.134 24 C -0.077 4.077 25 C -0.121 4.121 26 C -0.106 4.106 27 C -0.121 4.121 28 H 0.386 0.614 29 H 0.126 0.874 30 H -0.305 1.305 31 H -0.282 1.282 32 H 0.132 0.868 33 H 0.144 0.856 34 H 0.152 0.848 35 H 0.132 0.868 36 H 0.412 0.588 37 H 0.076 0.924 38 H 0.099 0.901 39 H 0.078 0.922 40 H 0.116 0.884 41 H 0.065 0.935 42 H 0.059 0.941 43 H 0.397 0.603 44 H 0.126 0.874 45 H 0.089 0.911 46 H 0.149 0.851 47 H 0.154 0.846 48 H 0.147 0.853 49 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.523 -2.314 0.057 4.216 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.192 4.192 3 Si 0.671 3.329 4 C -0.115 4.115 5 C -0.119 4.119 6 C -0.126 4.126 7 C -0.060 4.060 8 C -0.021 4.021 9 C -0.139 4.139 10 C -0.086 4.086 11 C -0.156 4.156 12 C 0.348 3.652 13 O -0.456 6.456 14 N -0.368 5.368 15 C -0.011 4.011 16 C 0.060 3.940 17 F -0.178 7.178 18 C -0.179 4.179 19 C -0.132 4.132 20 H 0.104 0.896 21 C 0.006 3.994 22 O -0.408 6.408 23 C -0.172 4.172 24 C -0.095 4.095 25 C -0.138 4.138 26 C -0.123 4.123 27 C -0.139 4.139 28 H 0.235 0.765 29 H 0.143 0.857 30 H -0.234 1.234 31 H -0.209 1.209 32 H 0.150 0.850 33 H 0.162 0.838 34 H 0.169 0.831 35 H 0.150 0.850 36 H 0.250 0.750 37 H 0.094 0.906 38 H 0.117 0.883 39 H 0.096 0.904 40 H 0.134 0.866 41 H 0.083 0.917 42 H 0.077 0.923 43 H 0.247 0.753 44 H 0.144 0.856 45 H 0.107 0.893 46 H 0.167 0.833 47 H 0.172 0.828 48 H 0.165 0.835 49 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 3.270 -1.191 -0.154 3.483 hybrid contribution -1.147 -0.616 0.514 1.400 sum 2.123 -1.808 0.360 2.811 Atomic orbital electron populations 1.86578 1.18525 1.80355 1.50185 1.25231 0.83412 1.11739 0.98825 0.94057 0.90387 0.72239 0.76267 1.20452 0.99266 0.95037 0.96793 1.21110 0.98938 0.93987 0.97882 1.21518 0.96919 1.00980 0.93192 1.18933 0.99245 0.93906 0.93910 1.19153 0.95961 0.93758 0.93248 1.21413 0.98106 1.01353 0.92987 1.21275 0.96801 0.93129 0.97387 1.19960 1.04501 0.95359 0.95813 1.18509 0.78748 0.81906 0.86048 1.90773 1.42536 1.66931 1.45386 1.45715 1.57759 1.09068 1.24236 1.21902 1.01362 0.89406 0.88444 1.22158 0.78439 0.94028 0.99344 1.92845 1.37492 1.96266 1.91224 1.23794 0.99862 0.95039 0.99253 1.22531 0.98460 0.95378 0.96862 0.89563 1.22225 0.96321 0.87653 0.93208 1.86441 1.51857 1.43595 1.58865 1.23574 1.04024 0.94237 0.95328 1.21425 0.94970 1.00590 0.92538 1.21447 1.00361 0.93682 0.98359 1.21479 0.99289 0.93580 0.97997 1.21177 0.98361 1.00452 0.93863 0.76506 0.85662 1.23353 1.20855 0.84976 0.83797 0.83088 0.84995 0.74972 0.90568 0.88312 0.90360 0.86621 0.91693 0.92283 0.75287 0.85572 0.89273 0.83293 0.82849 0.83527 0.83922 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.11 12.83 -148.98 -1.91 -3.02 16 2 C -0.08 0.12 2.80 71.24 0.20 0.32 16 3 Si 0.76 -1.89 29.87 68.60 2.05 0.16 16 4 C -0.12 0.13 5.36 -19.82 -0.11 0.02 16 5 C -0.10 0.07 9.67 22.24 0.21 0.28 16 6 C -0.11 0.16 9.43 22.49 0.21 0.37 16 7 C -0.06 0.03 5.88 -20.04 -0.12 -0.09 16 8 C -0.02 0.00 5.88 -20.00 -0.12 -0.12 16 9 C -0.12 -0.02 9.41 22.44 0.21 0.19 16 10 C -0.07 -0.23 9.58 22.49 0.22 -0.01 16 11 C -0.15 -0.52 5.88 -20.06 -0.12 -0.64 16 12 C 0.56 3.51 7.77 86.75 0.67 4.19 16 13 O -0.58 -7.85 16.33 -3.94 -0.06 -7.91 16 14 N -0.72 -0.53 5.40 -466.09 -2.52 -3.05 16 15 C 0.11 -0.11 5.43 86.37 0.47 0.36 16 16 C 0.08 -0.20 1.74 -10.27 -0.02 -0.22 16 17 F -0.20 -0.43 16.58 44.97 0.75 0.31 16 18 C -0.14 0.51 7.09 31.21 0.22 0.73 16 19 C -0.11 0.31 4.00 -10.18 -0.04 0.27 16 20 H 0.09 0.09 8.14 -2.39 -0.02 0.08 16 21 C 0.08 -0.35 6.89 71.98 0.50 0.14 16 22 O -0.60 0.19 13.66 -148.98 -2.04 -1.84 16 23 C -0.13 0.70 7.09 31.12 0.22 0.92 16 24 C -0.08 0.11 9.52 22.49 0.21 0.32 16 25 C -0.12 0.24 9.41 22.44 0.21 0.45 16 26 C -0.11 0.20 9.43 22.50 0.21 0.42 16 27 C -0.12 0.28 8.65 22.24 0.19 0.47 16 28 H 0.39 -1.29 8.70 -74.06 -0.64 -1.93 16 29 H 0.13 -0.37 7.96 -2.39 -0.02 -0.39 16 30 H -0.31 -1.73 7.11 99.48 0.71 -1.02 16 31 H -0.28 -0.30 7.00 99.48 0.70 0.40 16 32 H 0.13 -0.24 8.06 -2.91 -0.02 -0.26 16 33 H 0.14 -0.77 6.19 -2.91 -0.02 -0.79 16 34 H 0.15 -0.63 6.19 -2.91 -0.02 -0.65 16 35 H 0.13 0.57 7.64 -2.91 -0.02 0.55 16 36 H 0.41 -1.22 6.05 -92.71 -0.56 -1.78 16 37 H 0.08 0.06 8.14 -2.39 -0.02 0.04 16 38 H 0.10 -0.23 7.84 -2.39 -0.02 -0.25 16 39 H 0.08 -0.15 8.14 -2.38 -0.02 -0.17 16 40 H 0.12 -0.71 7.66 -2.39 -0.02 -0.73 16 41 H 0.06 -0.47 7.85 -2.38 -0.02 -0.49 16 42 H 0.06 -0.36 8.14 -2.39 -0.02 -0.38 16 43 H 0.40 -3.43 9.12 -74.06 -0.68 -4.11 16 44 H 0.13 -1.17 8.06 -2.39 -0.02 -1.18 16 45 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 46 H 0.15 -0.98 6.39 -2.91 -0.02 -1.00 16 47 H 0.15 -1.01 6.19 -2.91 -0.02 -1.03 16 48 H 0.15 -0.85 6.19 -2.91 -0.02 -0.87 16 49 H 0.14 -0.80 4.82 -2.91 -0.01 -0.82 16 Total: 0.00 -23.10 405.28 -1.11 -24.21 By element: Atomic # 1 Polarization: -16.41 SS G_CDS: -0.82 Total: -17.23 kcal Atomic # 6 Polarization: 4.93 SS G_CDS: 3.44 Total: 8.37 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: -2.52 Total: -3.05 kcal Atomic # 8 Polarization: -8.76 SS G_CDS: -4.01 Total: -12.77 kcal Atomic # 9 Polarization: -0.43 SS G_CDS: 0.75 Total: 0.31 kcal Atomic # 14 Polarization: -1.89 SS G_CDS: 2.05 Total: 0.16 kcal Total: -23.10 -1.11 -24.21 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13158362.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.017 kcal (2) G-P(sol) polarization free energy of solvation -23.102 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.119 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.106 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.208 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.225 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds